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Cow genome map

           
Conread name:
           
rspc027_k15.y1
        

               
Conread position:
               
1-162
               

               
Cow position:
               
chrX:38722289-38722124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chrX:29121213-29121000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 96
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chrX:39558188-39558404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
19, 13
               

               
Conread position:
               
5-220
               

               
Cow position:
               
chrX:917211-917417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
17, 87
               

               
Conread position:
               
5-220
               

               
Cow position:
               
chrX:37575004-37574792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
6-218
               

               
Cow position:
               
chrX:42498897-42499099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
13-200
               

               
Cow position:
               
chrX:10305203-10305380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
18-222
               

               
Cow position:
               
chrX:17662455-17662647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
19-212
               

               
Cow position:
               
chrX:1514277-1514454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
20-220
               

               
Cow position:
               
chrX:31515315-31515117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
89, 71
               

               
Conread position:
               
20-220
               

               
Cow position:
               
chrX:37232548-37232361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
21-217
               

               
Cow position:
               
chrX:22392845-22393035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
21-222
               

               
Cow position:
               
chrX:24365683-24365879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 35
               

               
Conread position:
               
21-222
               

               
Cow position:
               
chrX:39220219-39220026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
160, 69
               

               
Conread position:
               
23-203
               

               
Cow position:
               
chrX:17956828-17956660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
23-206
               

               
Cow position:
               
chrX:34315659-34315478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
70, 75
               

               
Conread position:
               
23-220
               

               
Cow position:
               
chrX:20584466-20584272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
161, 63
               

               
Conread position:
               
24-141
               

               
Cow position:
               
chrX:37062447-37062561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
24-151
               

               
Cow position:
               
chrX:23266552-23266429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
24-152
               

               
Cow position:
               
chrX:753293-753165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
83, 59
               

               
Conread position:
               
24-156
               

               
Cow position:
               
chrX:16323881-16324005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
24-159
               

               
Cow position:
               
chrX:38301946-38301815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
24-160
               

               
Cow position:
               
chrX:1122410-1122538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
24-160
               

               
Cow position:
               
chrX:11762864-11762996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
24-162
               

               
Cow position:
               
chrX:11653907-11653767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
93, 62
               

               
Conread position:
               
24-163
               

               
Cow position:
               
chrX:23785784-23785649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
24-163
               

               
Cow position:
               
chrX:32910236-32910106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
24-164
               

               
Cow position:
               
chrX:6222991-6223127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
24-166
               

               
Cow position:
               
chrX:11656218-11656080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
24-166
               

               
Cow position:
               
chrX:35382900-35383035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
24-167
               

               
Cow position:
               
chrX:4559870-4559737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
24-168
               

               
Cow position:
               
chrX:29733455-29733595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
24-169
               

               
Cow position:
               
chrX:27446823-27446682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
24-169
               

               
Cow position:
               
chrX:27668821-27668961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
24-169
               

               
Cow position:
               
chrX:42380975-42381117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
141, 62
               

               
Conread position:
               
24-177
               

               
Cow position:
               
chrX:27074914-27075065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
141, 62
               

               
Conread position:
               
24-181
               

               
Cow position:
               
chrX:3806819-3806670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
24-185
               

               
Cow position:
               
chrX:42282713-42282559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
94, 47
               

               
Conread position:
               
24-185
               

               
Cow position:
               
chrX:42449877-42450033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 32
               

               
Conread position:
               
24-189
               

               
Cow position:
               
chrX:25412042-25411886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
24-201
               

               
Cow position:
               
chrX:23498543-23498711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
24-202
               

               
Cow position:
               
chrX:12979697-12979871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
24-204
               

               
Cow position:
               
chrX:23188647-23188814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
165, 57
               

               
Conread position:
               
24-208
               

               
Cow position:
               
chrX:40531906-40532084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
24-209
               

               
Cow position:
               
chrX:41123196-41123021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
24-212
               

               
Cow position:
               
chrX:20678005-20678197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
142, 61
               

               
Conread position:
               
24-212
               

               
Cow position:
               
chrX:48044379-48044557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
24-213
               

               
Cow position:
               
chrX:27306591-27306407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
24-213
               

               
Cow position:
               
chrX:31312166-31311982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
154, 62
               

               
Conread position:
               
24-213
               

               
Cow position:
               
chrX:37489855-37489678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
24-213
               

               
Cow position:
               
chrX:41238218-41238398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
24-213
               

               
Cow position:
               
chrX:46429682-46429867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
24-214
               

               
Cow position:
               
chrX:21328050-21327860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
91, 58
               

               
Conread position:
               
24-214
               

               
Cow position:
               
chrX:41027296-41027110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
154, 63
               

               
Conread position:
               
24-217
               

               
Cow position:
               
chrX:19943099-19943286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
24-217
               

               
Cow position:
               
chrX:37119729-37119545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
24-218
               

               
Cow position:
               
chrX:13382462-13382280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 67
               

               
Conread position:
               
24-219
               

               
Cow position:
               
chrX:44702929-44703123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 32
               

               
Conread position:
               
24-219
               

               
Cow position:
               
chrX:46072680-46072871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
24-219
               

               
Cow position:
               
chrX:46532358-46532552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
154, 66
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:169409-169597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:1615911-1616096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:4043730-4043912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:4515828-4515632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
16, 49
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:6278361-6278552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:6407680-6407492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
36, 32
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:8731230-8731035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
146, 71
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:9201685-9201498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:10411847-10412038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
24, 69
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:10516390-10516198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
159, 61
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:11717646-11717840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
151, 63
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:13868840-13868651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:14973609-14973792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:16348435-16348620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
151, 15
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:17231873-17231681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:17726113-17725922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 63
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:22387113-22387294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:23562769-23562583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:27228264-27228076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:27261329-27261136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
80, 66
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:29549414-29549599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:29601691-29601882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:29680124-29680312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:31252544-31252366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
167, 46
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:31294435-31294615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:31489657-31489468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:32821165-32820978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:34238858-34238663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
32, 58
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:34411983-34411790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
144, 62
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:34441317-34441503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 32
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:36356242-36356061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:36514755-36514946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:38654304-38654484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:38728871-38728686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
36, 32
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:38964245-38964053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
168, 66
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:40035303-40035495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
91, 60
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:42235387-42235580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
139, 66
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:42247045-42247238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
136, 61
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:42492387-42492569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:42927687-42927871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:43779715-43779898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
163, 33
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:44339188-44339376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:45113758-45113567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
106, 64
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chrX:46587959-46587768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
150, 66
               

               
Conread position:
               
24-221
               

               
Cow position:
               
chrX:126904-126716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
158, 67
               

               
Conread position:
               
24-221
               

               
Cow position:
               
chrX:17888286-17888471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
24-221
               

               
Cow position:
               
chrX:18964692-18964877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chrX:878243-878437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chrX:5900599-5900415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chrX:11614830-11614646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chrX:11633819-11633626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chrX:15147060-15147241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chrX:15820731-15820543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chrX:19097082-19097276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
94, 57
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chrX:22914905-22915090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chrX:25037124-25036933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chrX:27393889-27394074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chrX:31626841-31627035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
146, 65
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chrX:33640112-33639919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chrX:34503057-34502868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chrX:34565420-34565227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
144, 15
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chrX:38094383-38094575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
142, 62
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chrX:38549584-38549393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
92, 67
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chrX:39352922-39352726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
127, 66
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chrX:40680751-40680557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chrX:42855595-42855401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
153, 66
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chrX:44961888-44961695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
25-218
               

               
Cow position:
               
chrX:7351433-7351251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
25-220
               

               
Cow position:
               
chrX:7695884-7695691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
166, 12
               

               
Conread position:
               
25-220
               

               
Cow position:
               
chrX:32977950-32978129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
25-222
               

               
Cow position:
               
chrX:14275607-14275800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
166, 57
               

               
Conread position:
               
25-222
               

               
Cow position:
               
chrX:38226974-38227147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
25-222
               

               
Cow position:
               
chrX:41068861-41068667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
144, 61
               

               
Conread position:
               
26-162
               

               
Cow position:
               
chrX:24054812-24054674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
101, 60
               

               
Conread position:
               
26-189
               

               
Cow position:
               
chrX:17966476-17966322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
26-213
               

               
Cow position:
               
chrX:38218851-38218663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 61
               

               
Conread position:
               
26-216
               

               
Cow position:
               
chrX:7806559-7806375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
152, 46
               

               
Conread position:
               
26-219
               

               
Cow position:
               
chrX:29194365-29194182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 60
               

               
Conread position:
               
26-220
               

               
Cow position:
               
chrX:10959260-10959449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
163, 65
               

               
Conread position:
               
26-220
               

               
Cow position:
               
chrX:17542094-17541906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 32
               

               
Conread position:
               
26-220
               

               
Cow position:
               
chrX:44192309-44192501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
26-221
               

               
Cow position:
               
chrX:15007015-15007202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
26-221
               

               
Cow position:
               
chrX:45598470-45598654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
26-222
               

               
Cow position:
               
chrX:6260014-6260202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
27-210
               

               
Cow position:
               
chrX:43730090-43730264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
27-220
               

               
Cow position:
               
chrX:32310240-32310051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 65
               

               
Conread position:
               
27-220
               

               
Cow position:
               
chrX:43426429-43426240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
141, 63
               

               
Conread position:
               
27-220
               

               
Cow position:
               
chrX:43568053-43567870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
27-222
               

               
Cow position:
               
chrX:1360223-1360032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
27-222
               

               
Cow position:
               
chrX:23513887-23514069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
27-222
               

               
Cow position:
               
chrX:25035248-25035433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
164, 63
               

               
Conread position:
               
28-213
               

               
Cow position:
               
chrX:1499799-1499620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
27, 63
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chrX:7278044-7277857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
174, 63
               

               
Conread position:
               
29-163
               

               
Cow position:
               
chrX:25788773-25788903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
29-220
               

               
Cow position:
               
chrX:23092003-23091816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
125, 57
               

               
Conread position:
               
29-220
               

               
Cow position:
               
chrX:27431786-27431966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
29-220
               

               
Cow position:
               
chrX:40269624-40269436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
29-220
               

               
Cow position:
               
chrX:40557547-40557733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
130, 52
               

               
Conread position:
               
29-221
               

               
Cow position:
               
chrX:4768864-4768690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
162, 57
               

               
Conread position:
               
29-222
               

               
Cow position:
               
chrX:12082192-12082379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
151, 61
               

               
Conread position:
               
29-222
               

               
Cow position:
               
chrX:23561990-23561807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
29-222
               

               
Cow position:
               
chrX:26881433-26881622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
29-222
               

               
Cow position:
               
chrX:41270854-41271051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
130, 51
               

               
Conread position:
               
32-218
               

               
Cow position:
               
chrX:29115835-29115661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
32-220
               

               
Cow position:
               
chrX:5638029-5638220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
46, 140
               

               
Conread position:
               
33-214
               

               
Cow position:
               
chrX:28134466-28134300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
33-218
               

               
Cow position:
               
chrX:23113413-23113226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
129, 53
               

               
Conread position:
               
33-220
               

               
Cow position:
               
chrX:6265471-6265651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
33-220
               

               
Cow position:
               
chrX:7722116-7721937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
141, 57
               

               
Conread position:
               
33-220
               

               
Cow position:
               
chrX:11454921-11455099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
128, 42
               

               
Conread position:
               
33-220
               

               
Cow position:
               
chrX:29050375-29050195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
33-220
               

               
Cow position:
               
chrX:35224424-35224244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
33-220
               

               
Cow position:
               
chrX:35413738-35413568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
180, 58
               

               
Conread position:
               
33-220
               

               
Cow position:
               
chrX:41884284-41884466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
33-220
               

               
Cow position:
               
chrX:45977054-45976870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
139, 57
               

               
Conread position:
               
33-222
               

               
Cow position:
               
chrX:8869274-8869458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
34-174
               

               
Cow position:
               
chrX:27145731-27145595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
34-220
               

               
Cow position:
               
chrX:11084937-11085108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
34-220
               

               
Cow position:
               
chrX:20168685-20168506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
34-222
               

               
Cow position:
               
chrX:20881818-20881991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
34-222
               

               
Cow position:
               
chrX:31729568-31729388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
35-220
               

               
Cow position:
               
chrX:8925824-8925649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
35-220
               

               
Cow position:
               
chrX:32623697-32623515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
144, 55
               

               
Conread position:
               
35-220
               

               
Cow position:
               
chrX:34402132-34401946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 119
               

               
Conread position:
               
35-220
               

               
Cow position:
               
chrX:42171170-42171348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
36-220
               

               
Cow position:
               
chrX:17630676-17630858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
132, 52
               

               
Conread position:
               
38-222
               

               
Cow position:
               
chrX:4278996-4279171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
42-220
               

               
Cow position:
               
chrX:21566526-21566352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
126, 48
               

               
Conread position:
               
44-220
               

               
Cow position:
               
chrX:23563674-23563842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
44-220
               

               
Cow position:
               
chrX:26625554-26625728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
119, 44
               

               
Conread position:
               
46-220
               

               
Cow position:
               
chrX:38936815-38936645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 45
               

               
Conread position:
               
47-222
               

               
Cow position:
               
chrX:12249929-12249748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
48-220
               

               
Cow position:
               
chrX:21004797-21004630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
56-220
               

               
Cow position:
               
chrX:27680503-27680343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
59-220
               

               
Cow position:
               
chrX:40826649-40826803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
60-220
               

               
Cow position:
               
chrX:27685350-27685196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
65-221
               

               
Cow position:
               
chrX:45993326-45993170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
88-222
               

               
Cow position:
               
chrX:11589511-11589641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
91-220
               

               
Cow position:
               
chrX:16416583-16416456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
93-220
               

               
Cow position:
               
chrX:43973617-43973492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
98-213
               

               
Cow position:
               
chrX:48664026-48663914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
104-220
               

               
Cow position:
               
chrX:41166901-41167016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
69, 60
               

               
Conread position:
               
105-222
               

               
Cow position:
               
chrX:36961701-36961589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
109-220
               

               
Cow position:
               
chrX:28845889-28845779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 56
               
Show alignments to all cow chromosomes.