Cow genome map

Conread name: rspc030_i12.y1

Conread position: 2-436
Cow position:
Alignm length: 451
Alignm identity: 289
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 47, 9

Conread position: 5-299
Cow position:
Alignm length: 305
Alignm identity: 213
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 43, 175

Conread position: 5-334
Cow position:
Alignm length: 343
Alignm identity: 238
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 41, 82

Conread position: 5-339
Cow position:
Alignm length: 350
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 30

Conread position: 5-407
Cow position:
Alignm length: 414
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 51

Conread position: 5-407
Cow position:
Alignm length: 421
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 111

Conread position: 5-420
Cow position:
Alignm length: 431
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 80

Conread position: 5-423
Cow position:
Alignm length: 430
Alignm identity: 289
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 47, 96

Conread position: 5-429
Cow position:
Alignm length: 444
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 110

Conread position: 5-435
Cow position:
Alignm length: 444
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 110

Conread position: 5-437
Cow position:
Alignm length: 449
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 96

Conread position: 5-445
Cow position:
Alignm length: 468
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 23

Conread position: 5-446
Cow position:
Alignm length: 459
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 96

Conread position: 5-489
Cow position:
Alignm length: 499
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 254

Conread position: 5-499
Cow position:
Alignm length: 513
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 92

Conread position: 5-499
Cow position:
Alignm length: 522
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 284

Conread position: 5-499
Cow position:
Alignm length: 505
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 171

Conread position: 5-499
Cow position:
Alignm length: 526
Alignm identity: 342
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 41, 117

Conread position: 5-500
Cow position:
Alignm length: 517
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 17

Conread position: 5-501
Cow position:
Alignm length: 521
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 115

Conread position: 5-501
Cow position:
Alignm length: 514
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 93

Conread position: 5-501
Cow position:
Alignm length: 523
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 55

Conread position: 5-501
Cow position:
Alignm length: 518
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 59

Conread position: 5-501
Cow position:
Alignm length: 523
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 118

Conread position: 5-501
Cow position:
Alignm length: 528
Alignm identity: 359
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 118

Conread position: 5-506
Cow position:
Alignm length: 524
Alignm identity: 337
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 113, 43

Conread position: 5-534
Cow position:
Alignm length: 549
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 23

Conread position: 5-540
Cow position:
Alignm length: 567
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 174

Conread position: 6-431
Cow position:
Alignm length: 437
Alignm identity: 284
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 33, 61

Conread position: 6-446
Cow position:
Alignm length: 456
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 158

Conread position: 6-500
Cow position:
Alignm length: 511
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 104

Conread position: 6-501
Cow position:
Alignm length: 520
Alignm identity: 345
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 40, 72

Conread position: 6-501
Cow position:
Alignm length: 513
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 142

Conread position: 6-501
Cow position:
Alignm length: 513
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 267

Conread position: 7-501
Cow position:
Alignm length: 519
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 107

Conread position: 7-501
Cow position:
Alignm length: 509
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 70

Conread position: 12-435
Cow position:
Alignm length: 435
Alignm identity: 281
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 32, 160

Conread position: 33-435
Cow position:
Alignm length: 416
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 250

Conread position: 37-499
Cow position:
Alignm length: 495
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 77

Conread position: 41-507
Cow position:
Alignm length: 496
Alignm identity: 326
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 107, 102

Conread position: 43-508
Cow position:
Alignm length: 487
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 54

Conread position: 45-501
Cow position:
Alignm length: 484
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 65

Conread position: 50-539
Cow position:
Alignm length: 501
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 46

Conread position: 60-455
Cow position:
Alignm length: 416
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 37

Conread position: 60-500
Cow position:
Alignm length: 449
Alignm identity: 303
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 58, 50

Conread position: 60-501
Cow position:
Alignm length: 458
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 102

Conread position: 60-501
Cow position:
Alignm length: 473
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 49

Conread position: 60-501
Cow position:
Alignm length: 463
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 37

Conread position: 61-420
Cow position:
Alignm length: 380
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 5

Conread position: 64-499
Cow position:
Alignm length: 454
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 14

Conread position: 64-501
Cow position:
Alignm length: 460
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 46

Conread position: 65-501
Cow position:
Alignm length: 449
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 32

Conread position: 65-501
Cow position:
Alignm length: 453
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 45

Conread position: 65-501
Cow position:
Alignm length: 456
Alignm identity: 303
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 53, 45

Conread position: 69-501
Cow position:
Alignm length: 453
Alignm identity: 302
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 41

Conread position: 71-436
Cow position:
Alignm length: 370
Alignm identity: 255
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 46, 28

Conread position: 71-501
Cow position:
Alignm length: 447
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 38

Conread position: 73-446
Cow position:
Alignm length: 385
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 37

Conread position: 73-500
Cow position:
Alignm length: 439
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 37

Conread position: 73-501
Cow position:
Alignm length: 447
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 290

Conread position: 73-501
Cow position:
Alignm length: 447
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 24

Conread position: 75-445
Cow position:
Alignm length: 381
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 35

Conread position: 81-330
Cow position:
Alignm length: 261
Alignm identity: 194
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 154, 84

Conread position: 81-501
Cow position:
Alignm length: 440
Alignm identity: 292
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 145, 29

Conread position: 81-505
Cow position:
Alignm length: 439
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 25

Conread position: 87-540
Cow position:
Alignm length: 492
Alignm identity: 318
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 23

Conread position: 92-540
Cow position:
Alignm length: 479
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 281

Conread position: 93-437
Cow position:
Alignm length: 358
Alignm identity: 233
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 6, 271

Conread position: 99-420
Cow position:
Alignm length: 326
Alignm identity: 218
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 155, 61

Conread position: 103-435
Cow position:
Alignm length: 342
Alignm identity: 241
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 16, 7

Conread position: 105-407
Cow position:
Alignm length: 315
Alignm identity: 208
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 84, 55

Conread position: 108-446
Cow position:
Alignm length: 346
Alignm identity: 225
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 10, 102

Conread position: 108-505
Cow position:
Alignm length: 420
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 146

Conread position: 111-435
Cow position:
Alignm length: 338
Alignm identity: 239
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 102, 132

Conread position: 115-501
Cow position:
Alignm length: 392
Alignm identity: 263
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 112, 123

Conread position: 127-392
Cow position:
Alignm length: 278
Alignm identity: 190
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 127, 0

Conread position: 127-393
Cow position:
Alignm length: 276
Alignm identity: 196
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 163, 38

Conread position: 129-501
Cow position:
Alignm length: 388
Alignm identity: 258
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 81, 90

Conread position: 135-501
Cow position:
Alignm length: 380
Alignm identity: 250
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 108, 16

Conread position: 136-501
Cow position:
Alignm length: 389
Alignm identity: 258
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 84, 34

Conread position: 144-501
Cow position:
Alignm length: 386
Alignm identity: 266
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 59, 137

Conread position: 145-497
Cow position:
Alignm length: 382
Alignm identity: 264
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 58, 115

Conread position: 153-506
Cow position:
Alignm length: 372
Alignm identity: 246
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 90, 0

Conread position: 159-407
Cow position:
Alignm length: 260
Alignm identity: 175
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 94, 13

Conread position: 160-501
Cow position:
Alignm length: 358
Alignm identity: 250
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 14, 141

Conread position: 162-391
Cow position:
Alignm length: 235
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 134

Conread position: 164-407
Cow position:
Alignm length: 252
Alignm identity: 166
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 165-434
Cow position:
Alignm length: 270
Alignm identity: 191
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 165-508
Cow position:
Alignm length: 362
Alignm identity: 242
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 125, 58

Conread position: 168-501
Cow position:
Alignm length: 349
Alignm identity: 228
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 18, 237

Conread position: 172-484
Cow position:
Alignm length: 332
Alignm identity: 234
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 121, 71

Conread position: 172-501
Cow position:
Alignm length: 347
Alignm identity: 238
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 76, 233

Conread position: 175-501
Cow position:
Alignm length: 347
Alignm identity: 236
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 77, 11

Conread position: 178-495
Cow position:
Alignm length: 341
Alignm identity: 246
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 57, 171

Conread position: 181-492
Cow position:
Alignm length: 322
Alignm identity: 218
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 61, 69

Conread position: 194-501
Cow position:
Alignm length: 328
Alignm identity: 217
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 61, 23

Conread position: 203-501
Cow position:
Alignm length: 315
Alignm identity: 212
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 214-543
Cow position:
Alignm length: 343
Alignm identity: 227
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 82

Conread position: 224-501
Cow position:
Alignm length: 286
Alignm identity: 186
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 18

Conread position: 225-446
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 65, 19

Conread position: 245-501
Cow position:
Alignm length: 259
Alignm identity: 175
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 24, 52

Conread position: 246-495
Cow position:
Alignm length: 262
Alignm identity: 182
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 17, 123

Conread position: 247-501
Cow position:
Alignm length: 268
Alignm identity: 180
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 159

Conread position: 258-499
Cow position:
Alignm length: 255
Alignm identity: 182
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 99

Conread position: 258-501
Cow position:
Alignm length: 255
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 37, 24

Conread position: 259-503
Cow position:
Alignm length: 261
Alignm identity: 180
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 31, 101

Conread position: 267-492
Cow position:
Alignm length: 235
Alignm identity: 160
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 25, 150

Conread position: 267-501
Cow position:
Alignm length: 249
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 287-499
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 151, 70

Conread position: 292-501
Cow position:
Alignm length: 210
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 123, 0

Conread position: 329-543
Cow position:
Alignm length: 217
Alignm identity: 147
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 108, 36

Show alignments to all cow chromosomes.