Cow genome map


           Conread name:
           rspc030_i12.y1
        

               Conread position:
               5-360
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 114
               

               Conread position:
               5-391
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 63
               

               Conread position:
               5-399
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 84
               

               Conread position:
               5-407
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 109
               

               Conread position:
               5-434
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               288
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               43, 96
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               293
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               113, 55
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 77
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 109
               

               Conread position:
               5-436
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 60
               

               Conread position:
               5-446
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 109
               

               Conread position:
               5-485
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               341
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               43, 143
               

               Conread position:
               5-495
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 101
               

               Conread position:
               5-499
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 191
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 177
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               346
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               29, 110
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 111
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 108
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 109
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 159
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 17
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 105
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 108
               

               Conread position:
               5-538
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 110
               

               Conread position:
               5-539
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               360
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               46, 173
               

               Conread position:
               6-407
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 108
               

               Conread position:
               6-501
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 57
               

               Conread position:
               6-529
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 305
               

               Conread position:
               7-363
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               265
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               34, 150
               

               Conread position:
               7-434
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 107
               

               Conread position:
               7-435
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 9
               

               Conread position:
               7-445
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 109
               

               Conread position:
               8-407
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 40
               

               Conread position:
               8-480
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 107
               

               Conread position:
               11-508
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 8
               

               Conread position:
               25-434
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               29, 73
               

               Conread position:
               46-501
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 66
               

               Conread position:
               48-503
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 62
               

               Conread position:
               57-500
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               302
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               16, 117
               

               Conread position:
               59-501
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               323
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               59, 47
               

               Conread position:
               60-407
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               252
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               38, 51
               

               Conread position:
               60-431
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 37
               

               Conread position:
               62-501
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 109
               

               Conread position:
               64-449
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               160, 33
               

               Conread position:
               64-501
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 33
               

               Conread position:
               66-392
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               50, 36
               

               Conread position:
               66-501
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 79
               

               Conread position:
               69-397
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               145, 29
               

               Conread position:
               69-501
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               296
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               49, 19
               

               Conread position:
               70-508
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 104
               

               Conread position:
               71-298
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               182
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               22, 40
               

               Conread position:
               71-472
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               71-501
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 39
               

               Conread position:
               73-501
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               311
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               44, 37
               

               Conread position:
               73-501
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               303
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               45, 37
               

               Conread position:
               74-391
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 5
               

               Conread position:
               75-420
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 36
               

               Conread position:
               78-392
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 19
               

               Conread position:
               78-508
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               164, 92
               

               Conread position:
               82-501
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 325
               

               Conread position:
               82-543
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 185
               

               Conread position:
               86-501
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 11
               

               Conread position:
               86-527
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 11
               

               Conread position:
               88-392
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               32, 215
               

               Conread position:
               90-501
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 7
               

               Conread position:
               94-439
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 339
               

               Conread position:
               97-501
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 13
               

               Conread position:
               103-500
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 7
               

               Conread position:
               103-500
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               15, 7
               

               Conread position:
               109-491
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               272
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               9, 52
               

               Conread position:
               114-491
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               259
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               168, 48
               

               Conread position:
               115-435
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               110, 124
               

               Conread position:
               115-480
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               253
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               142, 55
               

               Conread position:
               123-499
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 34
               

               Conread position:
               124-436
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               110, 10
               

               Conread position:
               127-491
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               250
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               127, 250
               

               Conread position:
               137-501
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               248
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               102, 277
               

               Conread position:
               148-480
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               144, 35
               

               Conread position:
               155-446
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               66, 247
               

               Conread position:
               168-436
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               121, 23
               

               Conread position:
               169-419
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               16, 31
               

               Conread position:
               174-500
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               70, 19
               

               Conread position:
               174-501
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               80, 188
               

               Conread position:
               183-499
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               71, 18
               

               Conread position:
               187-449
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               190-537
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               61, 173
               

               Conread position:
               194-480
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               67, 175
               

               Conread position:
               194-501
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               97, 22
               

               Conread position:
               196-495
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               57, 210
               

               Conread position:
               203-501
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 146
               

               Conread position:
               215-436
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 191
               

               Conread position:
               219-497
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               35, 273
               

               Conread position:
               224-501
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               224-501
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               240-385
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               54, 9
               

               Conread position:
               245-539
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 154
               

               Conread position:
               251-501
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               41, 118
               

               Conread position:
               256-392
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               34, 7
               

               Conread position:
               259-498
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               36, 229
               

               Conread position:
               260-450
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               264-407
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               75, 86
               

               Conread position:
               264-500
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               33, 70
               
Show alignments to all cow chromosomes.