Cow genome map


           Conread name:
           rspc030_i12.y1
        

               Conread position:
               2-501
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 7
               

               Conread position:
               4-501
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 94
               

               Conread position:
               4-543
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 188
               

               Conread position:
               5-337
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 107
               

               Conread position:
               5-385
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               43, 62
               

               Conread position:
               5-403
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 109
               

               Conread position:
               5-427
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 96
               

               Conread position:
               5-434
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               302
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               39, 96
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               299
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               26, 100
               

               Conread position:
               5-437
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 106
               

               Conread position:
               5-437
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 105
               

               Conread position:
               5-439
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 74
               

               Conread position:
               5-480
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 96
               

               Conread position:
               5-485
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 129
               

               Conread position:
               5-499
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               340
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               209, 160
               

               Conread position:
               5-499
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 49
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 11
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 93
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 99
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 17
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 113
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 108
               

               Conread position:
               6-501
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 92
               

               Conread position:
               8-435
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 103
               

               Conread position:
               8-495
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 25
               

               Conread position:
               9-296
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               32, 92
               

               Conread position:
               11-501
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 90
               

               Conread position:
               17-501
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 147
               

               Conread position:
               18-501
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 31
               

               Conread position:
               40-500
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 70
               

               Conread position:
               51-500
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 23
               

               Conread position:
               51-501
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 46
               

               Conread position:
               52-501
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               315
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               67, 27
               

               Conread position:
               52-501
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 58
               

               Conread position:
               59-501
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 48
               

               Conread position:
               60-501
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 9
               

               Conread position:
               63-543
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               330
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               156, 34
               

               Conread position:
               64-439
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 46
               

               Conread position:
               64-481
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 46
               

               Conread position:
               64-501
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 33
               

               Conread position:
               64-508
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               300
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               21, 48
               

               Conread position:
               65-437
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 32
               

               Conread position:
               65-490
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 50
               

               Conread position:
               67-435
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 62
               

               Conread position:
               70-392
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 40
               

               Conread position:
               71-353
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               47, 39
               

               Conread position:
               71-359
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               48, 39
               

               Conread position:
               71-379
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 39
               

               Conread position:
               73-420
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               253
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               45, 37
               

               Conread position:
               73-499
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               290
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               26, 38
               

               Conread position:
               73-501
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 28
               

               Conread position:
               73-501
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 37
               

               Conread position:
               74-407
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               25, 37
               

               Conread position:
               82-501
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 28
               

               Conread position:
               85-501
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 78
               

               Conread position:
               86-446
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 71
               

               Conread position:
               87-501
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               292
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               83, 232
               

               Conread position:
               90-437
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               92-499
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               292
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               20, 129
               

               Conread position:
               92-501
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               277
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               26, 18
               

               Conread position:
               94-446
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 16
               

               Conread position:
               96-444
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               22, 14
               

               Conread position:
               100-501
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               288
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               8, 157
               

               Conread position:
               107-392
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               11, 50
               

               Conread position:
               107-429
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               132-501
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               5, 37
               

               Conread position:
               136-501
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               259
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               27, 39
               

               Conread position:
               136-537
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               119, 36
               

               Conread position:
               143-392
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               10, 219
               

               Conread position:
               146-501
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 77
               

               Conread position:
               148-427
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               207
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               155, 13
               

               Conread position:
               149-501
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               262
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               7, 242
               

               Conread position:
               157-501
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               55, 7
               

               Conread position:
               160-501
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               62, 207
               

               Conread position:
               168-446
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               73, 49
               

               Conread position:
               170-501
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               232
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               87, 41
               

               Conread position:
               171-501
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               240
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               86, 190
               

               Conread position:
               172-501
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               82, 21
               

               Conread position:
               174-437
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               89, 217
               

               Conread position:
               178-446
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               110, 65
               

               Conread position:
               180-502
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               61, 13
               

               Conread position:
               188-499
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               151, 88
               

               Conread position:
               190-501
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               9, 92
               

               Conread position:
               198-495
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               56, 165
               

               Conread position:
               210-503
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               26, 153
               

               Conread position:
               214-500
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               40, 16
               

               Conread position:
               214-501
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               91, 138
               

               Conread position:
               214-501
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               40, 148
               

               Conread position:
               226-447
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               64, 172
               

               Conread position:
               240-501
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               251-501
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               25, 108
               

               Conread position:
               260-501
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               41, 211
               

               Conread position:
               264-501
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               268-501
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               24, 134
               

               Conread position:
               268-501
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               286-501
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               24, 10
               

               Conread position:
               289-501
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               289-501
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               31, 62
               

               Conread position:
               291-499
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               67, 58
               

               Conread position:
               291-501
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               110, 56
               

               Conread position:
               298-501
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               103, 96
               

               Conread position:
               306-500
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               86, 90
               

               Conread position:
               325-501
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               19, 25
               

               Conread position:
               327-501
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               17, 26
               
Show alignments to all cow chromosomes.