Cow genome map
Conread name: | rspc030_i12.y1 |
Conread position: | 5-420 |
Cow position: | chr14:39779123-39778696 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 109 |
Conread position: | 5-428 |
Cow position: | chr14:26432880-26433306 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 20 |
Conread position: | 5-431 |
Cow position: | chr14:25779466-25779035 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 256 |
Conread position: | 5-434 |
Cow position: | chr14:19618389-19618820 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 305 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 43, 24 |
Conread position: | 5-434 |
Cow position: | chr14:27591579-27592026 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 165 |
Conread position: | 5-435 |
Cow position: | chr14:26441968-26442411 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 109 |
Conread position: | 5-439 |
Cow position: | chr14:19863078-19863507 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 28 |
Conread position: | 5-446 |
Cow position: | chr14:34199473-34199923 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 65 |
Conread position: | 5-447 |
Cow position: | chr14:32371379-32371821 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 301 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 42, 17 |
Conread position: | 5-453 |
Cow position: | chr14:37883547-37884003 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 314 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 43, 111 |
Conread position: | 5-501 |
Cow position: | chr14:12244018-12244528 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 344 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 30, 92 |
Conread position: | 5-501 |
Cow position: | chr14:20640251-20640775 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 364 |
Conread position: | 5-501 |
Cow position: | chr14:21201459-21201966 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 111 |
Conread position: | 5-501 |
Cow position: | chr14:22989404-22988889 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 173 |
Conread position: | 5-506 |
Cow position: | chr14:19189407-19188898 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 61 |
Conread position: | 5-541 |
Cow position: | chr14:20666655-20667189 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 96 |
Conread position: | 6-501 |
Cow position: | chr14:7647669-7648147 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 328 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 29, 106 |
Conread position: | 8-392 |
Cow position: | chr14:27791897-27791516 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 106 |
Conread position: | 9-501 |
Cow position: | chr14:48427442-48426926 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 367 |
Conread position: | 12-501 |
Cow position: | chr14:39769860-39770367 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 97 |
Conread position: | 12-501 |
Cow position: | chr14:41749401-41749902 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 109 |
Conread position: | 27-426 |
Cow position: | chr14:43036221-43035840 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 269 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 53, 11 |
Conread position: | 36-418 |
Cow position: | chr14:40433256-40432872 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 236 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 82, 74 |
Conread position: | 37-501 |
Cow position: | chr14:18345396-18345870 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 79 |
Conread position: | 48-434 |
Cow position: | chr14:9308549-9308160 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 273 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 22, 63 |
Conread position: | 49-439 |
Cow position: | chr14:10078579-10078194 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 278 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 69, 48 |
Conread position: | 49-499 |
Cow position: | chr14:8848570-8848134 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 61 |
Conread position: | 59-500 |
Cow position: | chr14:5221975-5222430 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 287 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 165, 140 |
Conread position: | 60-501 |
Cow position: | chr14:41211168-41210718 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 51 |
Conread position: | 61-392 |
Cow position: | chr14:1716044-1715703 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 235 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 57, 49 |
Conread position: | 61-500 |
Cow position: | chr14:33791499-33791048 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 49 |
Conread position: | 64-492 |
Cow position: | chr14:20932925-20932485 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 301 |
Conread position: | 64-495 |
Cow position: | chr14:39433957-39434394 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 300 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 30, 18 |
Conread position: | 64-499 |
Cow position: | chr14:33714381-33714818 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 46 |
Conread position: | 64-501 |
Cow position: | chr14:13810243-13809808 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 300 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 54, 12 |
Conread position: | 64-540 |
Cow position: | chr14:23682570-23682082 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 325 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 165, 33 |
Conread position: | 71-431 |
Cow position: | chr14:48412577-48412949 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 244 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 47, 39 |
Conread position: | 71-439 |
Cow position: | chr14:4991291-4990929 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 252 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 217, 71 |
Conread position: | 71-498 |
Cow position: | chr14:8540916-8541350 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 290 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 47, 39 |
Conread position: | 71-501 |
Cow position: | chr14:32452561-32452105 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 341 |
Conread position: | 72-355 |
Cow position: | chr14:37131957-37131662 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 38 |
Conread position: | 78-504 |
Cow position: | chr14:26940930-26941370 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 286 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 138, 156 |
Conread position: | 79-420 |
Cow position: | chr14:38337859-38338189 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 236 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 169, 30 |
Conread position: | 90-391 |
Cow position: | chr14:37884130-37884437 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 207 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 28, 20 |
Conread position: | 95-500 |
Cow position: | chr14:39918487-39918881 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 15 |
Conread position: | 101-427 |
Cow position: | chr14:19372613-19372276 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 9 |
Conread position: | 104-501 |
Cow position: | chr14:11043222-11043640 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 283 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 14, 151 |
Conread position: | 108-485 |
Cow position: | chr14:13846250-13845859 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 69 |
Conread position: | 110-434 |
Cow position: | chr14:33309248-33309573 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 221 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 111, 70 |
Conread position: | 115-431 |
Cow position: | chr14:40165677-40165358 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 224 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 125, 38 |
Conread position: | 115-492 |
Cow position: | chr14:24387707-24387314 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 261 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 139, 296 |
Conread position: | 136-495 |
Cow position: | chr14:20110485-20110861 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 226 |
Conread position: | 141-501 |
Cow position: | chr14:20826702-20826345 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 257 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 113, 33 |
Conread position: | 175-501 |
Cow position: | chr14:36254508-36254835 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 121 |
Conread position: | 177-392 |
Cow position: | chr14:24608163-24607939 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 161 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 77, 186 |
Conread position: | 179-427 |
Cow position: | chr14:15492791-15492530 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 176 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 245-480 |
Cow position: | chr14:2038690-2038918 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 158 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 267-500 |
Cow position: | chr14:41837769-41838004 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 163 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 24, 171 |
Conread position: | 271-476 |
Cow position: | chr14:19487387-19487183 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 144 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 272-501 |
Cow position: | chr14:47170256-47170496 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 165 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 20, 78 |
Conread position: | 286-500 |
Cow position: | chr14:21224716-21224498 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 157 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 51, 64 |
Conread position: | 301-515 |
Cow position: | chr14:10706938-10706717 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 155 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 136, 48 |
Conread position: | 308-501 |
Cow position: | chr14:36775706-36775517 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 139 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 11, 54 |
Show alignments to all cow chromosomes.