Cow genome map

Conread name: rspc030_i12.y1

Conread position: 5-420
Cow position: chr14:39779123-39778696 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 109

Conread position: 5-428
Cow position: chr14:26432880-26433306 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 20

Conread position: 5-431
Cow position: chr14:25779466-25779035 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 256

Conread position: 5-434
Cow position: chr14:19618389-19618820 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 305
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 24

Conread position: 5-434
Cow position: chr14:27591579-27592026 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 165

Conread position: 5-435
Cow position: chr14:26441968-26442411 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 109

Conread position: 5-439
Cow position: chr14:19863078-19863507 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 28

Conread position: 5-446
Cow position: chr14:34199473-34199923 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 65

Conread position: 5-447
Cow position: chr14:32371379-32371821 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 301
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 17

Conread position: 5-453
Cow position: chr14:37883547-37884003 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 314
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 43, 111

Conread position: 5-501
Cow position: chr14:12244018-12244528 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 344
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 30, 92

Conread position: 5-501
Cow position: chr14:20640251-20640775 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 364

Conread position: 5-501
Cow position: chr14:21201459-21201966 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 111

Conread position: 5-501
Cow position: chr14:22989404-22988889 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 173

Conread position: 5-506
Cow position: chr14:19189407-19188898 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 61

Conread position: 5-541
Cow position: chr14:20666655-20667189 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 96

Conread position: 6-501
Cow position: chr14:7647669-7648147 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 328
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 29, 106

Conread position: 8-392
Cow position: chr14:27791897-27791516 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 106

Conread position: 9-501
Cow position: chr14:48427442-48426926 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 367

Conread position: 12-501
Cow position: chr14:39769860-39770367 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 97

Conread position: 12-501
Cow position: chr14:41749401-41749902 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 109

Conread position: 27-426
Cow position: chr14:43036221-43035840 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 269
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 53, 11

Conread position: 36-418
Cow position: chr14:40433256-40432872 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 236
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 82, 74

Conread position: 37-501
Cow position: chr14:18345396-18345870 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 79

Conread position: 48-434
Cow position: chr14:9308549-9308160 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 273
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 22, 63

Conread position: 49-439
Cow position: chr14:10078579-10078194 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 278
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 69, 48

Conread position: 49-499
Cow position: chr14:8848570-8848134 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 61

Conread position: 59-500
Cow position: chr14:5221975-5222430 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 287
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 165, 140

Conread position: 60-501
Cow position: chr14:41211168-41210718 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 51

Conread position: 61-392
Cow position: chr14:1716044-1715703 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 235
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 57, 49

Conread position: 61-500
Cow position: chr14:33791499-33791048 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 49

Conread position: 64-492
Cow position: chr14:20932925-20932485 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 301

Conread position: 64-495
Cow position: chr14:39433957-39434394 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 300
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 30, 18

Conread position: 64-499
Cow position: chr14:33714381-33714818 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 46

Conread position: 64-501
Cow position: chr14:13810243-13809808 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 300
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 54, 12

Conread position: 64-540
Cow position: chr14:23682570-23682082 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 325
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 165, 33

Conread position: 71-431
Cow position: chr14:48412577-48412949 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 244
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 47, 39

Conread position: 71-439
Cow position: chr14:4991291-4990929 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 252
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 217, 71

Conread position: 71-498
Cow position: chr14:8540916-8541350 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 290
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 39

Conread position: 71-501
Cow position: chr14:32452561-32452105 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 341

Conread position: 72-355
Cow position: chr14:37131957-37131662 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 38

Conread position: 78-504
Cow position: chr14:26940930-26941370 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 286
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 138, 156

Conread position: 79-420
Cow position: chr14:38337859-38338189 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 236
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 169, 30

Conread position: 90-391
Cow position: chr14:37884130-37884437 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 207
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 28, 20

Conread position: 95-500
Cow position: chr14:39918487-39918881 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 15

Conread position: 101-427
Cow position: chr14:19372613-19372276 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 9

Conread position: 104-501
Cow position: chr14:11043222-11043640 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 283
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 14, 151

Conread position: 108-485
Cow position: chr14:13846250-13845859 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 69

Conread position: 110-434
Cow position: chr14:33309248-33309573 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 221
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 111, 70

Conread position: 115-431
Cow position: chr14:40165677-40165358 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 224
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 125, 38

Conread position: 115-492
Cow position: chr14:24387707-24387314 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 261
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 139, 296

Conread position: 136-495
Cow position: chr14:20110485-20110861 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 226

Conread position: 141-501
Cow position: chr14:20826702-20826345 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 257
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 113, 33

Conread position: 175-501
Cow position: chr14:36254508-36254835 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 121

Conread position: 177-392
Cow position: chr14:24608163-24607939 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 77, 186

Conread position: 179-427
Cow position: chr14:15492791-15492530 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 245-480
Cow position: chr14:2038690-2038918 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 267-500
Cow position: chr14:41837769-41838004 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 171

Conread position: 271-476
Cow position: chr14:19487387-19487183 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 272-501
Cow position: chr14:47170256-47170496 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 20, 78

Conread position: 286-500
Cow position: chr14:21224716-21224498 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 51, 64

Conread position: 301-515
Cow position: chr14:10706938-10706717 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 136, 48

Conread position: 308-501
Cow position: chr14:36775706-36775517 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 54

Show alignments to all cow chromosomes.