Cow genome map


           Conread name:
           rspc030_i12.y1
        

               Conread position:
               5-407
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 53
               

               Conread position:
               5-427
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 88
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 109
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               36, 23
               

               Conread position:
               5-439
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 121
               

               Conread position:
               5-443
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               36, 44
               

               Conread position:
               5-445
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 59
               

               Conread position:
               5-450
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 162
               

               Conread position:
               5-499
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 109
               

               Conread position:
               5-500
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               355
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               43, 341
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               341
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               28, 98
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 16
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 152
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 49
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 17
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               348
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               48, 56
               

               Conread position:
               5-507
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 96
               

               Conread position:
               5-509
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 110
               

               Conread position:
               6-392
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 96
               

               Conread position:
               6-501
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 108
               

               Conread position:
               7-495
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 95
               

               Conread position:
               7-495
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 94
               

               Conread position:
               7-501
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 27
               

               Conread position:
               8-502
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               321
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               46, 60
               

               Conread position:
               9-435
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 109
               

               Conread position:
               10-392
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 91
               

               Conread position:
               11-501
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 217
               

               Conread position:
               12-329
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               237
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               36, 102
               

               Conread position:
               30-472
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               309
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               30, 73
               

               Conread position:
               39-501
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 12
               

               Conread position:
               40-436
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 70
               

               Conread position:
               58-429
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 39
               

               Conread position:
               60-501
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 50
               

               Conread position:
               64-389
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               190, 33
               

               Conread position:
               64-501
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 33
               

               Conread position:
               71-499
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 39
               

               Conread position:
               73-437
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               11, 85
               

               Conread position:
               90-501
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 20
               

               Conread position:
               90-505
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               293
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               26, 7
               

               Conread position:
               97-501
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 13
               

               Conread position:
               108-501
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 136
               

               Conread position:
               115-491
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               106, 40
               

               Conread position:
               115-501
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               34, 88
               

               Conread position:
               115-501
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               268
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               142, 16
               

               Conread position:
               118-434
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               70, 164
               

               Conread position:
               122-503
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               132, 38
               

               Conread position:
               127-419
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               57, 126
               

               Conread position:
               127-492
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               252
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               125, 30
               

               Conread position:
               127-500
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               162, 82
               

               Conread position:
               136-500
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 89
               

               Conread position:
               137-501
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               117, 275
               

               Conread position:
               160-498
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               97, 202
               

               Conread position:
               160-501
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               248
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               91, 114
               

               Conread position:
               192-492
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               77, 168
               

               Conread position:
               192-501
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               77, 238
               

               Conread position:
               202-435
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               206-500
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               28, 200
               

               Conread position:
               223-498
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               31, 200
               

               Conread position:
               224-508
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               13, 45
               

               Conread position:
               260-497
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               30, 139
               

               Conread position:
               264-451
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               25, 136
               

               Conread position:
               288-543
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               56, 10
               
Show alignments to all cow chromosomes.