Cow genome map
| Conread name: | rspc030_i12.y1 |
| Conread position: | 5-407 |
| Cow position: | chr15:41360548-41360946 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 53 |
| Conread position: | 5-427 |
| Cow position: | chr15:20352255-20351816 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 88 |
| Conread position: | 5-435 |
| Cow position: | chr15:30047120-30047569 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 109 |
| Conread position: | 5-435 |
| Cow position: | chr15:34206783-34207211 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 36, 23 |
| Conread position: | 5-439 |
| Cow position: | chr15:47042209-47042658 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 121 |
| Conread position: | 5-443 |
| Cow position: | chr15:17233600-17233161 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 36, 44 |
| Conread position: | 5-445 |
| Cow position: | chr15:608572-608112 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 59 |
| Conread position: | 5-450 |
| Cow position: | chr15:10456584-10457054 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 162 |
| Conread position: | 5-499 |
| Cow position: | chr15:18720730-18720238 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 109 |
| Conread position: | 5-500 |
| Cow position: | chr15:6905968-6905441 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 355 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 43, 341 |
| Conread position: | 5-501 |
| Cow position: | chr15:6226781-6227275 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 341 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 28, 98 |
| Conread position: | 5-501 |
| Cow position: | chr15:14871157-14870656 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 16 |
| Conread position: | 5-501 |
| Cow position: | chr15:16543048-16543537 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 152 |
| Conread position: | 5-501 |
| Cow position: | chr15:26896305-26896798 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 49 |
| Conread position: | 5-501 |
| Cow position: | chr15:36435621-36435103 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 17 |
| Conread position: | 5-501 |
| Cow position: | chr15:37382038-37381530 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 348 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 48, 56 |
| Conread position: | 5-507 |
| Cow position: | chr15:5234589-5235096 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 96 |
| Conread position: | 5-509 |
| Cow position: | chr15:26078954-26079453 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 110 |
| Conread position: | 6-392 |
| Cow position: | chr15:23567711-23568108 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 96 |
| Conread position: | 6-501 |
| Cow position: | chr15:24968202-24967702 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 108 |
| Conread position: | 7-495 |
| Cow position: | chr15:52482415-52482922 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 95 |
| Conread position: | 7-495 |
| Cow position: | chr15:53164433-53163927 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 94 |
| Conread position: | 7-501 |
| Cow position: | chr15:22532652-22532154 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 27 |
| Conread position: | 8-502 |
| Cow position: | chr15:16604232-16603730 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 321 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 9-435 |
| Cow position: | chr15:20486801-20487227 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 109 |
| Conread position: | 10-392 |
| Cow position: | chr15:13515780-13515385 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 91 |
| Conread position: | 11-501 |
| Cow position: | chr15:46563067-46563576 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 217 |
| Conread position: | 12-329 |
| Cow position: | chr15:23486764-23487086 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 237 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 36, 102 |
| Conread position: | 30-472 |
| Cow position: | chr15:30316199-30316632 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 309 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 30, 73 |
| Conread position: | 39-501 |
| Cow position: | chr15:36259214-36259696 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 12 |
| Conread position: | 40-436 |
| Cow position: | chr15:16307793-16307397 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 70 |
| Conread position: | 58-429 |
| Cow position: | chr15:4093566-4093951 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 39 |
| Conread position: | 60-501 |
| Cow position: | chr15:11011252-11011692 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 50 |
| Conread position: | 64-389 |
| Cow position: | chr15:9928709-9928381 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 190, 33 |
| Conread position: | 64-501 |
| Cow position: | chr15:16823289-16822851 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 33 |
| Conread position: | 71-499 |
| Cow position: | chr15:27972869-27973303 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 39 |
| Conread position: | 73-437 |
| Cow position: | chr15:33625297-33624931 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 11, 85 |
| Conread position: | 90-501 |
| Cow position: | chr15:12304968-12304540 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 20 |
| Conread position: | 90-505 |
| Cow position: | chr15:17763226-17762804 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 293 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 26, 7 |
| Conread position: | 97-501 |
| Cow position: | chr15:39598558-39598146 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 13 |
| Conread position: | 108-501 |
| Cow position: | chr15:47843797-47844187 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 136 |
| Conread position: | 115-491 |
| Cow position: | chr15:44658662-44658277 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 106, 40 |
| Conread position: | 115-501 |
| Cow position: | chr15:225501-225902 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 34, 88 |
| Conread position: | 115-501 |
| Cow position: | chr15:1722549-1722940 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 268 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 142, 16 |
| Conread position: | 118-434 |
| Cow position: | chr15:49258176-49257841 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 70, 164 |
| Conread position: | 122-503 |
| Cow position: | chr15:23696622-23697003 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 132, 38 |
| Conread position: | 127-419 |
| Cow position: | chr15:24128320-24128023 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 57, 126 |
| Conread position: | 127-492 |
| Cow position: | chr15:33643376-33643001 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 252 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 125, 30 |
| Conread position: | 127-500 |
| Cow position: | chr15:5420592-5420980 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 162, 82 |
| Conread position: | 136-500 |
| Cow position: | chr15:25907194-25906820 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 89 |
| Conread position: | 137-501 |
| Cow position: | chr15:41125287-41125656 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 117, 275 |
| Conread position: | 160-498 |
| Cow position: | chr15:8354304-8353945 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 97, 202 |
| Conread position: | 160-501 |
| Cow position: | chr15:36888084-36887740 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 91, 114 |
| Conread position: | 192-492 |
| Cow position: | chr15:36353897-36353579 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 77, 168 |
| Conread position: | 192-501 |
| Cow position: | chr15:53716661-53716335 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 77, 238 |
| Conread position: | 202-435 |
| Cow position: | chr15:30470751-30470996 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 206-500 |
| Cow position: | chr15:51307465-51307768 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 28, 200 |
| Conread position: | 223-498 |
| Cow position: | chr15:14888443-14888733 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 31, 200 |
| Conread position: | 224-508 |
| Cow position: | chr15:49784094-49784387 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 13, 45 |
| Conread position: | 260-497 |
| Cow position: | chr15:52809426-52809661 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 30, 139 |
| Conread position: | 264-451 |
| Cow position: | chr15:44237571-44237378 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 136 |
| Conread position: | 288-543 |
| Cow position: | chr15:26851105-26851361 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 56, 10 |
Show alignments to all cow chromosomes.