Cow genome map


           Conread name:
           rspc030_i12.y1
        

               Conread position:
               5-386
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 105
               

               Conread position:
               5-436
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               289
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               39, 96
               

               Conread position:
               5-446
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               49, 107
               

               Conread position:
               5-446
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 398
               

               Conread position:
               5-453
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               310
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               43, 100
               

               Conread position:
               5-493
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 99
               

               Conread position:
               5-495
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 82
               

               Conread position:
               5-499
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 19
               

               Conread position:
               5-499
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 125
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               344
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               49, 106
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 49
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 109
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 24
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               334
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               44, 97
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 105
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 105
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 159
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               352
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               36, 168
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 111
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               348
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               43, 89
               

               Conread position:
               5-504
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               341
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               146, 43
               

               Conread position:
               5-537
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 98
               

               Conread position:
               5-539
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 130
               

               Conread position:
               5-541
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 106
               

               Conread position:
               6-402
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               279
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               25, 106
               

               Conread position:
               6-447
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 73
               

               Conread position:
               6-475
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 95
               

               Conread position:
               6-495
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               341
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               6-501
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 185
               

               Conread position:
               7-386
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 106
               

               Conread position:
               7-439
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 157
               

               Conread position:
               7-439
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 104
               

               Conread position:
               8-397
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 93
               

               Conread position:
               8-501
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               339
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               40, 93
               

               Conread position:
               10-437
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 101
               

               Conread position:
               11-408
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               33, 404
               

               Conread position:
               25-421
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               294
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               23, 147
               

               Conread position:
               30-495
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 18
               

               Conread position:
               40-501
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 57
               

               Conread position:
               46-446
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 51
               

               Conread position:
               54-536
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 57
               

               Conread position:
               59-500
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 38
               

               Conread position:
               60-501
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 37
               

               Conread position:
               60-505
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 37
               

               Conread position:
               64-435
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               54, 20
               

               Conread position:
               71-435
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               47, 39
               

               Conread position:
               71-495
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 39
               

               Conread position:
               71-499
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 86
               

               Conread position:
               71-500
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               296
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               219, 11
               

               Conread position:
               71-500
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 39
               

               Conread position:
               71-501
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 39
               

               Conread position:
               72-499
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               300
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               73-393
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               182, 84
               

               Conread position:
               74-395
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               228
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               181, 100
               

               Conread position:
               78-396
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               40, 19
               

               Conread position:
               81-501
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 29
               

               Conread position:
               82-450
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               20, 140
               

               Conread position:
               84-501
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               289
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               185, 26
               

               Conread position:
               92-501
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               123, 89
               

               Conread position:
               92-531
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               302
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               24, 18
               

               Conread position:
               97-505
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 13
               

               Conread position:
               103-500
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               277
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               15, 7
               

               Conread position:
               104-501
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 69
               

               Conread position:
               108-501
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 131
               

               Conread position:
               115-435
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               238
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               135, 55
               

               Conread position:
               115-436
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               136, 41
               

               Conread position:
               115-495
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               272
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               175, 22
               

               Conread position:
               115-501
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               148, 57
               

               Conread position:
               120-538
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               92, 279
               

               Conread position:
               123-437
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               165, 49
               

               Conread position:
               123-443
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               169, 49
               

               Conread position:
               135-501
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               216, 39
               

               Conread position:
               136-407
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               136-501
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               268
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               107, 36
               

               Conread position:
               140-489
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               81, 197
               

               Conread position:
               156-396
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               65, 101
               

               Conread position:
               157-501
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               247
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               27, 63
               

               Conread position:
               160-501
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               247
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               131, 80
               

               Conread position:
               174-501
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               78, 129
               

               Conread position:
               176-502
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               74, 26
               

               Conread position:
               180-441
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               35, 266
               

               Conread position:
               180-501
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               74, 103
               

               Conread position:
               189-446
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               58, 91
               

               Conread position:
               192-435
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               192-500
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               94, 59
               

               Conread position:
               209-420
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               43, 152
               

               Conread position:
               216-501
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               20, 170
               

               Conread position:
               223-501
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               31, 183
               

               Conread position:
               224-501
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               226-500
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 83
               

               Conread position:
               238-501
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               23, 148
               

               Conread position:
               240-501
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               52, 9
               

               Conread position:
               244-501
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               245-492
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               45, 108
               

               Conread position:
               245-501
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               47, 113
               

               Conread position:
               245-501
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               43, 156
               

               Conread position:
               245-538
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               47, 94
               

               Conread position:
               264-508
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               31, 93
               

               Conread position:
               270-501
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 132
               

               Conread position:
               285-501
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               286-499
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               155, 52
               

               Conread position:
               287-507
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               63, 11
               

               Conread position:
               299-541
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 96
               
Show alignments to all cow chromosomes.