Cow genome map


           Conread name:
           rspc030_i12.y1
        

               Conread position:
               5-378
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 49
               

               Conread position:
               5-386
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 109
               

               Conread position:
               5-402
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 109
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 97
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 14
               

               Conread position:
               5-436
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               301
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               30, 125
               

               Conread position:
               5-446
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 106
               

               Conread position:
               5-453
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 93
               

               Conread position:
               5-492
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 30
               

               Conread position:
               5-495
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 15
               

               Conread position:
               5-499
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 37
               

               Conread position:
               5-499
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 101
               

               Conread position:
               5-500
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 56
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 96
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 224
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 106
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 92
               

               Conread position:
               5-539
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 93
               

               Conread position:
               5-543
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 106
               

               Conread position:
               6-392
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 105
               

               Conread position:
               6-439
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 95
               

               Conread position:
               6-495
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               343
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               42, 110
               

               Conread position:
               6-500
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 18
               

               Conread position:
               7-464
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               314
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               28, 51
               

               Conread position:
               7-480
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 108
               

               Conread position:
               7-493
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 51
               

               Conread position:
               8-493
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               326
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               41, 106
               

               Conread position:
               8-499
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               333
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               41, 106
               

               Conread position:
               11-500
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               323
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               46, 90
               

               Conread position:
               17-501
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 151
               

               Conread position:
               19-501
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               344
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               16, 46
               

               Conread position:
               23-432
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 78
               

               Conread position:
               25-501
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 86
               

               Conread position:
               36-435
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 15
               

               Conread position:
               39-495
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               300
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               48, 58
               

               Conread position:
               40-435
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               149, 24
               

               Conread position:
               45-501
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 65
               

               Conread position:
               45-501
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 65
               

               Conread position:
               60-499
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               298
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               38, 100
               

               Conread position:
               61-392
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               248
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               26, 15
               

               Conread position:
               61-501
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 31
               

               Conread position:
               62-430
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 43
               

               Conread position:
               64-445
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               64-501
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 48
               

               Conread position:
               71-420
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 40
               

               Conread position:
               71-501
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               289
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               39, 44
               

               Conread position:
               74-392
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               236
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               43, 36
               

               Conread position:
               78-437
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               40, 19
               

               Conread position:
               79-541
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               306
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               20, 111
               

               Conread position:
               86-495
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               296
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               89-501
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               283
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               27, 21
               

               Conread position:
               93-437
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               122, 100
               

               Conread position:
               102-501
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               281
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               13, 72
               

               Conread position:
               103-501
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               278
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               16, 7
               

               Conread position:
               104-495
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               117-435
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               234
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               126, 275
               

               Conread position:
               123-453
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               5, 48
               

               Conread position:
               146-435
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               95, 122
               

               Conread position:
               157-501
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 28
               

               Conread position:
               166-501
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               242
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               71, 195
               

               Conread position:
               166-501
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               84, 77
               

               Conread position:
               176-392
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               178-439
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               135, 187
               

               Conread position:
               180-501
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               184-439
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               70, 118
               

               Conread position:
               184-491
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               33, 73
               

               Conread position:
               187-501
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               56, 22
               

               Conread position:
               207-501
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               47, 30
               

               Conread position:
               211-501
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               77, 157
               

               Conread position:
               212-495
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               31, 58
               

               Conread position:
               220-500
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               34, 135
               

               Conread position:
               240-543
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               52, 13
               

               Conread position:
               245-507
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               46, 157
               

               Conread position:
               247-431
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               7, 77
               

               Conread position:
               251-501
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               39, 147
               

               Conread position:
               251-502
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               41, 183
               

               Conread position:
               258-439
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               264-488
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               40, 90
               

               Conread position:
               264-501
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               20, 140
               

               Conread position:
               264-536
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               149, 85
               

               Conread position:
               285-543
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               59, 7
               

               Conread position:
               288-501
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               149, 72
               

               Conread position:
               288-502
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               307-501
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               141, 115
               
Show alignments to all cow chromosomes.