Cow genome map


           Conread name:
           rspc030_i12.y1
        

               Conread position:
               2-407
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 9
               

               Conread position:
               4-501
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               326
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               50, 10
               

               Conread position:
               5-309
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               39, 53
               

               Conread position:
               5-416
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 23
               

               Conread position:
               5-420
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 109
               

               Conread position:
               5-434
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 109
               

               Conread position:
               5-439
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 110
               

               Conread position:
               5-446
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 17
               

               Conread position:
               5-451
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 93
               

               Conread position:
               5-492
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               339
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               44, 109
               

               Conread position:
               5-499
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 351
               

               Conread position:
               5-499
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 30
               

               Conread position:
               5-499
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 95
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               323
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               24, 162
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 109
               

               Conread position:
               5-508
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               322
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               30, 107
               

               Conread position:
               6-495
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 108
               

               Conread position:
               6-501
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               349
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               89, 48
               

               Conread position:
               6-501
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 169
               

               Conread position:
               6-525
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 110
               

               Conread position:
               7-501
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 109
               

               Conread position:
               8-516
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               325
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               43, 20
               

               Conread position:
               11-407
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 90
               

               Conread position:
               11-501
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               341
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               30, 144
               

               Conread position:
               20-543
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 181
               

               Conread position:
               33-417
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 185
               

               Conread position:
               40-386
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               250
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               15, 71
               

               Conread position:
               45-373
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               73, 52
               

               Conread position:
               48-435
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               265
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               221, 62
               

               Conread position:
               59-435
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               257
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               195, 29
               

               Conread position:
               60-439
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 37
               

               Conread position:
               64-501
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               321
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               41, 80
               

               Conread position:
               65-390
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               237
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               53, 32
               

               Conread position:
               67-392
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               51, 23
               

               Conread position:
               67-435
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 23
               

               Conread position:
               69-446
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               69-501
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 41
               

               Conread position:
               71-385
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               47, 39
               

               Conread position:
               71-420
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 40
               

               Conread position:
               71-435
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               185, 164
               

               Conread position:
               71-501
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 39
               

               Conread position:
               71-501
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               71-501
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 99
               

               Conread position:
               71-508
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 26
               

               Conread position:
               73-391
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               161, 24
               

               Conread position:
               76-500
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 35
               

               Conread position:
               81-501
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               288
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               36, 29
               

               Conread position:
               83-501
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 80
               

               Conread position:
               86-501
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               169, 20
               

               Conread position:
               92-429
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               161, 21
               

               Conread position:
               94-501
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               270
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               24, 16
               

               Conread position:
               94-528
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 182
               

               Conread position:
               115-359
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               140, 87
               

               Conread position:
               120-501
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               276
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               132, 18
               

               Conread position:
               123-501
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               22, 46
               

               Conread position:
               128-501
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 280
               

               Conread position:
               129-495
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               87, 49
               

               Conread position:
               132-501
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               122, 294
               

               Conread position:
               145-501
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               90, 8
               

               Conread position:
               161-427
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               130, 23
               

               Conread position:
               170-501
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               20, 69
               

               Conread position:
               172-492
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               42, 64
               

               Conread position:
               172-501
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               54, 45
               

               Conread position:
               173-480
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               81, 23
               

               Conread position:
               176-528
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               254
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               67, 37
               

               Conread position:
               181-491
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               62, 7
               

               Conread position:
               190-499
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               211, 73
               

               Conread position:
               194-501
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               75, 206
               

               Conread position:
               198-501
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               219-514
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               24, 135
               

               Conread position:
               224-499
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               28, 43
               

               Conread position:
               224-501
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               17, 71
               

               Conread position:
               235-420
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               58, 14
               

               Conread position:
               242-501
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               156, 47
               

               Conread position:
               251-501
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               93, 99
               

               Conread position:
               251-501
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               42, 73
               

               Conread position:
               257-500
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               258-501
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               32, 57
               

               Conread position:
               258-501
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               33, 79
               

               Conread position:
               261-501
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               76, 26
               

               Conread position:
               264-501
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               267-501
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               25, 9
               

               Conread position:
               267-501
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               175, 31
               

               Conread position:
               285-495
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               53, 65
               

               Conread position:
               286-501
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               117, 10
               

               Conread position:
               288-501
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               293-501
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               51, 57
               

               Conread position:
               293-504
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 87
               

               Conread position:
               305-501
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               33, 44
               

               Conread position:
               320-500
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               101, 0
               
Show alignments to all cow chromosomes.