Cow genome map


           Conread name:
           rspc030_i12.y1
        

               Conread position:
               5-405
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               286
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               49, 19
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 101
               

               Conread position:
               5-439
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               15, 109
               

               Conread position:
               5-445
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               303
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               43, 104
               

               Conread position:
               5-445
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 105
               

               Conread position:
               5-446
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 94
               

               Conread position:
               5-471
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 109
               

               Conread position:
               5-490
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               336
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               44, 94
               

               Conread position:
               5-490
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 96
               

               Conread position:
               5-500
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 110
               

               Conread position:
               5-500
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               331
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               36, 81
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 106
               

               Conread position:
               5-504
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 106
               

               Conread position:
               5-504
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 14
               

               Conread position:
               5-541
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 82
               

               Conread position:
               6-408
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               112, 29
               

               Conread position:
               6-499
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 109
               

               Conread position:
               6-501
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 109
               

               Conread position:
               6-501
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               357
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               40, 118
               

               Conread position:
               6-506
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 48
               

               Conread position:
               6-532
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 91
               

               Conread position:
               7-499
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 47
               

               Conread position:
               7-508
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               343
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               53, 93
               

               Conread position:
               13-501
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               333
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               26, 12
               

               Conread position:
               30-501
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 48
               

               Conread position:
               33-501
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               320
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               88, 30
               

               Conread position:
               40-501
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 128
               

               Conread position:
               48-501
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 49
               

               Conread position:
               48-501
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 63
               

               Conread position:
               48-501
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 6
               

               Conread position:
               59-501
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 24
               

               Conread position:
               60-446
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 50
               

               Conread position:
               60-495
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               289
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               39, 51
               

               Conread position:
               69-436
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               244
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               175, 37
               

               Conread position:
               69-510
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 42
               

               Conread position:
               73-449
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 37
               

               Conread position:
               79-481
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               279
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               32, 91
               

               Conread position:
               92-446
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 97
               

               Conread position:
               92-501
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 18
               

               Conread position:
               97-435
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               21, 13
               

               Conread position:
               100-501
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               9, 73
               

               Conread position:
               103-406
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               107-501
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               11, 111
               

               Conread position:
               107-501
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 189
               

               Conread position:
               113-500
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               253
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               141, 16
               

               Conread position:
               115-501
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 135
               

               Conread position:
               115-540
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 167
               

               Conread position:
               116-492
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               137, 14
               

               Conread position:
               134-499
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 239
               

               Conread position:
               136-386
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               136-437
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               150, 34
               

               Conread position:
               136-501
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 221
               

               Conread position:
               138-501
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               245
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               116, 44
               

               Conread position:
               157-464
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               5, 108
               

               Conread position:
               170-473
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               82, 184
               

               Conread position:
               172-501
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               242
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               71, 190
               

               Conread position:
               177-420
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               63, 184
               

               Conread position:
               189-501
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               101, 62
               

               Conread position:
               192-501
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               230
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               61, 163
               

               Conread position:
               193-499
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               59, 102
               

               Conread position:
               224-501
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               31, 134
               

               Conread position:
               240-437
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               62, 9
               

               Conread position:
               269-501
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               38, 49
               

               Conread position:
               286-501
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               151, 187
               

               Conread position:
               288-501
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               292-501
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 58
               
Show alignments to all cow chromosomes.