Cow genome map


           Conread name:
           rspc030_i12.y1
        

               Conread position:
               5-292
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 169
               

               Conread position:
               5-374
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               5-382
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               266
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               44, 109
               

               Conread position:
               5-392
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               43, 168
               

               Conread position:
               5-431
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 93
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               300
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               60, 48
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 106
               

               Conread position:
               5-438
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               302
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               44, 112
               

               Conread position:
               5-446
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 60
               

               Conread position:
               5-446
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 96
               

               Conread position:
               5-483
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 83
               

               Conread position:
               5-490
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 53
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 304
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               346
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               43, 61
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 358
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 64
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 179
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 110
               

               Conread position:
               5-530
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 96
               

               Conread position:
               6-439
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 435
               

               Conread position:
               6-499
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 112
               

               Conread position:
               6-501
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 140
               

               Conread position:
               6-504
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 253
               

               Conread position:
               7-386
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               259
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               34, 83
               

               Conread position:
               7-427
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 107
               

               Conread position:
               7-502
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               350
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               9, 384
               

               Conread position:
               8-527
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 108
               

               Conread position:
               9-501
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               338
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               32, 94
               

               Conread position:
               9-501
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 93
               

               Conread position:
               13-435
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               279
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               20-501
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 82
               

               Conread position:
               36-435
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               40-437
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               271
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               203, 70
               

               Conread position:
               48-404
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               251
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               70, 62
               

               Conread position:
               60-435
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 36
               

               Conread position:
               60-449
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               183, 18
               

               Conread position:
               60-492
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               298
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               13, 39
               

               Conread position:
               64-386
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               9, 110
               

               Conread position:
               64-501
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 48
               

               Conread position:
               65-501
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 45
               

               Conread position:
               65-504
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 32
               

               Conread position:
               71-392
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               153, 26
               

               Conread position:
               71-445
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               273
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               71-492
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               291
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               28, 40
               

               Conread position:
               71-501
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               295
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               44, 39
               

               Conread position:
               71-501
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               301
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               45, 39
               

               Conread position:
               73-501
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 37
               

               Conread position:
               74-436
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               31, 99
               

               Conread position:
               74-501
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               280
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               181, 102
               

               Conread position:
               78-501
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               299
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               172, 71
               

               Conread position:
               81-452
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               261
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               37, 29
               

               Conread position:
               82-392
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               10, 82
               

               Conread position:
               83-446
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 27
               

               Conread position:
               83-499
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 27
               

               Conread position:
               84-501
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               292
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               15, 27
               

               Conread position:
               89-492
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               135, 68
               

               Conread position:
               99-437
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               154, 26
               

               Conread position:
               104-498
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               276
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               139, 9
               

               Conread position:
               108-501
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               273
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               8, 78
               

               Conread position:
               115-407
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               87, 55
               

               Conread position:
               118-337
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               136, 35
               

               Conread position:
               124-405
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               90, 128
               

               Conread position:
               124-501
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               145, 33
               

               Conread position:
               128-501
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               88, 262
               

               Conread position:
               129-437
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               229
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               125, 31
               

               Conread position:
               129-501
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               28, 50
               

               Conread position:
               136-384
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               101, 81
               

               Conread position:
               136-501
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               254
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               152, 51
               

               Conread position:
               138-439
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               220
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               108, 178
               

               Conread position:
               145-501
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               257
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               98, 43
               

               Conread position:
               191-437
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               57, 215
               

               Conread position:
               192-472
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               63, 168
               

               Conread position:
               192-501
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               62, 180
               

               Conread position:
               209-392
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               34, 152
               

               Conread position:
               231-501
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               260-501
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               32, 55
               

               Conread position:
               264-501
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               28, 138
               

               Conread position:
               266-501
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               24, 135
               

               Conread position:
               267-501
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               26, 89
               

               Conread position:
               280-501
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               11, 41
               

               Conread position:
               286-501
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               111, 25
               

               Conread position:
               292-501
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               294-501
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               50, 56
               

               Conread position:
               317-501
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               317-501
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               352-507
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               49, 42
               
Show alignments to all cow chromosomes.