Cow genome map
Conread name: | rspc030_i12.y1 |
Conread position: | 5-292 |
Cow position: | chr21:21216404-21216115 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 169 |
Conread position: | 5-374 |
Cow position: | chr21:23192781-23192393 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 5-382 |
Cow position: | chr21:2367077-2367456 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 266 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 44, 109 |
Conread position: | 5-392 |
Cow position: | chr21:44515002-44515398 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 284 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 43, 168 |
Conread position: | 5-431 |
Cow position: | chr21:42414362-42413924 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 93 |
Conread position: | 5-435 |
Cow position: | chr21:395615-396044 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 300 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 60, 48 |
Conread position: | 5-435 |
Cow position: | chr21:33350482-33350918 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 106 |
Conread position: | 5-438 |
Cow position: | chr21:36795337-36795783 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 302 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 44, 112 |
Conread position: | 5-446 |
Cow position: | chr21:5392801-5392351 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 60 |
Conread position: | 5-446 |
Cow position: | chr21:36297216-36297680 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 96 |
Conread position: | 5-483 |
Cow position: | chr21:643074-643557 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 83 |
Conread position: | 5-490 |
Cow position: | chr21:31691218-31691713 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 53 |
Conread position: | 5-501 |
Cow position: | chr21:81807-82311 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 304 |
Conread position: | 5-501 |
Cow position: | chr21:23672483-23672997 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 346 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 43, 61 |
Conread position: | 5-501 |
Cow position: | chr21:24858048-24858568 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 358 |
Conread position: | 5-501 |
Cow position: | chr21:29069591-29069071 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 64 |
Conread position: | 5-501 |
Cow position: | chr21:29214418-29213907 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 179 |
Conread position: | 5-501 |
Cow position: | chr21:33983073-33982562 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 110 |
Conread position: | 5-530 |
Cow position: | chr21:37299202-37299747 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 96 |
Conread position: | 6-439 |
Cow position: | chr21:42384246-42384688 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 435 |
Conread position: | 6-499 |
Cow position: | chr21:38120841-38121329 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 112 |
Conread position: | 6-501 |
Cow position: | chr21:641322-641836 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 140 |
Conread position: | 6-504 |
Cow position: | chr21:19196430-19195906 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 253 |
Conread position: | 7-386 |
Cow position: | chr21:4905228-4904839 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 259 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 34, 83 |
Conread position: | 7-427 |
Cow position: | chr21:46263916-46264339 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 107 |
Conread position: | 7-502 |
Cow position: | chr21:6713800-6713271 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 350 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 9, 384 |
Conread position: | 8-527 |
Cow position: | chr21:11740392-11739842 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 108 |
Conread position: | 9-501 |
Cow position: | chr21:5971095-5970594 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 338 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 32, 94 |
Conread position: | 9-501 |
Cow position: | chr21:20160425-20160930 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 93 |
Conread position: | 13-435 |
Cow position: | chr21:23801375-23800951 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 279 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 33, 20 |
Conread position: | 20-501 |
Cow position: | chr21:34653836-34654322 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 82 |
Conread position: | 36-435 |
Cow position: | chr21:26244699-26245091 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 265 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 19, 40 |
Conread position: | 40-437 |
Cow position: | chr21:28626017-28626416 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 271 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 203, 70 |
Conread position: | 48-404 |
Cow position: | chr21:31662244-31662613 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 251 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 70, 62 |
Conread position: | 60-435 |
Cow position: | chr21:29484780-29485155 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 36 |
Conread position: | 60-449 |
Cow position: | chr21:18942032-18941645 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 267 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 183, 18 |
Conread position: | 60-492 |
Cow position: | chr21:27521531-27521098 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 298 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 13, 39 |
Conread position: | 64-386 |
Cow position: | chr21:35996971-35997300 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 220 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 9, 110 |
Conread position: | 64-501 |
Cow position: | chr21:24598459-24598895 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 48 |
Conread position: | 65-501 |
Cow position: | chr21:23586677-23587124 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 45 |
Conread position: | 65-504 |
Cow position: | chr21:22860803-22861247 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 32 |
Conread position: | 71-392 |
Cow position: | chr21:42841784-42841463 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 225 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 153, 26 |
Conread position: | 71-445 |
Cow position: | chr21:27569351-27568986 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 273 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 46, 26 |
Conread position: | 71-492 |
Cow position: | chr21:31253342-31253776 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 291 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 28, 40 |
Conread position: | 71-501 |
Cow position: | chr21:5238202-5238640 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 295 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 44, 39 |
Conread position: | 71-501 |
Cow position: | chr21:6051313-6051757 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 301 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 45, 39 |
Conread position: | 73-501 |
Cow position: | chr21:32559545-32559119 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 37 |
Conread position: | 74-436 |
Cow position: | chr21:13365151-13365522 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 249 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 31, 99 |
Conread position: | 74-501 |
Cow position: | chr21:45355646-45356067 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 280 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 181, 102 |
Conread position: | 78-501 |
Cow position: | chr21:47465307-47464867 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 299 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 172, 71 |
Conread position: | 81-452 |
Cow position: | chr21:28190845-28191225 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 261 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 37, 29 |
Conread position: | 82-392 |
Cow position: | chr21:18800715-18800400 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 220 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 10, 82 |
Conread position: | 83-446 |
Cow position: | chr21:9990333-9990696 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 203, 27 |
Conread position: | 83-499 |
Cow position: | chr21:802475-802073 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 27 |
Conread position: | 84-501 |
Cow position: | chr21:17183741-17184170 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 292 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 15, 27 |
Conread position: | 89-492 |
Cow position: | chr21:32339912-32339502 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 268 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 135, 68 |
Conread position: | 99-437 |
Cow position: | chr21:27624547-27624877 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 233 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 154, 26 |
Conread position: | 104-498 |
Cow position: | chr21:7825333-7824941 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 276 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 139, 9 |
Conread position: | 108-501 |
Cow position: | chr21:41590714-41590314 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 273 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 8, 78 |
Conread position: | 115-407 |
Cow position: | chr21:45921208-45920909 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 197 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 87, 55 |
Conread position: | 118-337 |
Cow position: | chr21:18041989-18041768 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 173 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 136, 35 |
Conread position: | 124-405 |
Cow position: | chr21:17637758-17638039 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 196 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 90, 128 |
Conread position: | 124-501 |
Cow position: | chr21:48234299-48233924 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 258 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 145, 33 |
Conread position: | 128-501 |
Cow position: | chr21:6910020-6909637 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 249 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 88, 262 |
Conread position: | 129-437 |
Cow position: | chr21:20260456-20260140 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 229 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 125, 31 |
Conread position: | 129-501 |
Cow position: | chr21:12462106-12461717 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 265 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 28, 50 |
Conread position: | 136-384 |
Cow position: | chr21:17856415-17856670 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 179 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 101, 81 |
Conread position: | 136-501 |
Cow position: | chr21:12301632-12301278 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 254 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 152, 51 |
Conread position: | 138-439 |
Cow position: | chr21:12723030-12723332 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 220 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 108, 178 |
Conread position: | 145-501 |
Cow position: | chr21:30222222-30222594 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 257 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 98, 43 |
Conread position: | 191-437 |
Cow position: | chr21:45262889-45262631 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 179 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 57, 215 |
Conread position: | 192-472 |
Cow position: | chr21:16569825-16570118 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 196 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 63, 168 |
Conread position: | 192-501 |
Cow position: | chr21:44214048-44214363 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 217 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 62, 180 |
Conread position: | 209-392 |
Cow position: | chr21:297694-297888 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 141 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 34, 152 |
Conread position: | 231-501 |
Cow position: | chr21:674655-674920 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 189 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 67, 24 |
Conread position: | 260-501 |
Cow position: | chr21:14126283-14126524 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 168 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 32, 55 |
Conread position: | 264-501 |
Cow position: | chr21:71585-71838 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 177 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 28, 138 |
Conread position: | 266-501 |
Cow position: | chr21:12104366-12104605 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 173 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 24, 135 |
Conread position: | 267-501 |
Cow position: | chr21:8426449-8426695 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 181 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 26, 89 |
Conread position: | 280-501 |
Cow position: | chr21:22850943-22851167 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 164 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 11, 41 |
Conread position: | 286-501 |
Cow position: | chr21:19868926-19868710 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 150 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 111, 25 |
Conread position: | 292-501 |
Cow position: | chr21:6851206-6851417 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 143 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 128, 0 |
Conread position: | 294-501 |
Cow position: | chr21:39393784-39394001 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 156 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 50, 56 |
Conread position: | 317-501 |
Cow position: | chr21:8506487-8506295 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 137 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 317-501 |
Cow position: | chr21:8509375-8509183 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 134 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 352-507 |
Cow position: | chr21:21158905-21159061 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 115 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 49, 42 |
Show alignments to all cow chromosomes.