Cow genome map


           Conread name:
           rspc030_i12.y1
        

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 109
               

               Conread position:
               5-439
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 115
               

               Conread position:
               5-446
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 66
               

               Conread position:
               5-446
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 101
               

               Conread position:
               5-451
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 429
               

               Conread position:
               5-457
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 96
               

               Conread position:
               5-480
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 109
               

               Conread position:
               5-499
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               330
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               46, 117
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 94
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 174
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               338
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               113, 43
               

               Conread position:
               7-500
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 104
               

               Conread position:
               15-406
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               281
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               14, 48
               

               Conread position:
               32-501
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 78
               

               Conread position:
               33-437
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               277
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               85, 47
               

               Conread position:
               40-435
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 81
               

               Conread position:
               48-499
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 62
               

               Conread position:
               58-502
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               313
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               60, 52
               

               Conread position:
               63-495
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 107
               

               Conread position:
               64-499
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 33
               

               Conread position:
               64-501
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               279
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               226, 33
               

               Conread position:
               67-501
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 43
               

               Conread position:
               69-435
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               257
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               221, 40
               

               Conread position:
               71-495
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 39
               

               Conread position:
               78-543
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 33
               

               Conread position:
               79-437
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               30, 95
               

               Conread position:
               86-498
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               168, 11
               

               Conread position:
               89-386
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               29, 21
               

               Conread position:
               91-501
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               277
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               27, 19
               

               Conread position:
               106-381
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               12, 48
               

               Conread position:
               112-542
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               104, 48
               

               Conread position:
               135-501
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               11, 7
               

               Conread position:
               136-498
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               119, 153
               

               Conread position:
               137-407
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               137-458
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               245
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               122, 49
               

               Conread position:
               137-501
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               271
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               120, 270
               

               Conread position:
               138-446
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               217
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               104, 116
               

               Conread position:
               143-407
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               146, 17
               

               Conread position:
               148-501
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               29, 96
               

               Conread position:
               162-492
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               237
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               73, 15
               

               Conread position:
               172-500
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               9, 32
               

               Conread position:
               174-495
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               225
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               74, 13
               

               Conread position:
               178-446
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               75, 233
               

               Conread position:
               179-499
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               159, 112
               

               Conread position:
               188-420
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               49, 217
               

               Conread position:
               192-501
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               60, 169
               

               Conread position:
               199-501
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               61, 38
               

               Conread position:
               201-501
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               49, 158
               

               Conread position:
               220-501
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               34, 271
               

               Conread position:
               225-501
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               29, 66
               

               Conread position:
               229-540
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               33, 24
               

               Conread position:
               240-492
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               49, 9
               

               Conread position:
               240-500
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               49, 9
               

               Conread position:
               245-501
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               58, 116
               

               Conread position:
               258-501
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               33, 100
               

               Conread position:
               258-514
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               183, 32
               

               Conread position:
               259-480
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               33, 93
               

               Conread position:
               265-538
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               33, 141
               

               Conread position:
               288-501
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               56, 62
               

               Conread position:
               292-502
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               109, 102
               

               Conread position:
               294-501
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               104, 99
               

               Conread position:
               307-501
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               310-540
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               91, 84
               
Show alignments to all cow chromosomes.