Cow genome map
| Conread name: | rspc030_i12.y1 |
| Conread position: | 2-501 |
| Cow position: | chr24:31811834-31812349 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 7 |
| Conread position: | 5-338 |
| Cow position: | chr24:29027701-29028033 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 93 |
| Conread position: | 5-396 |
| Cow position: | chr24:29180550-29180935 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 286 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 43, 96 |
| Conread position: | 5-446 |
| Cow position: | chr24:201984-201538 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 109 |
| Conread position: | 5-446 |
| Cow position: | chr24:11118938-11119377 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 294 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 94, 52 |
| Conread position: | 5-446 |
| Cow position: | chr24:32205147-32204695 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 111 |
| Conread position: | 5-453 |
| Cow position: | chr24:28496939-28496476 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 96 |
| Conread position: | 5-483 |
| Cow position: | chr24:20874329-20874826 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 30 |
| Conread position: | 5-495 |
| Cow position: | chr24:44041357-44040853 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 347 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 87, 106 |
| Conread position: | 5-498 |
| Cow position: | chr24:15057040-15057545 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 95 |
| Conread position: | 5-499 |
| Cow position: | chr24:30235527-30236034 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 116 |
| Conread position: | 5-500 |
| Cow position: | chr24:23556679-23556174 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 100 |
| Conread position: | 5-501 |
| Cow position: | chr24:211630-212134 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 109 |
| Conread position: | 5-501 |
| Cow position: | chr24:2402728-2402213 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 99 |
| Conread position: | 5-501 |
| Cow position: | chr24:15246975-15246494 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 20 |
| Conread position: | 5-501 |
| Cow position: | chr24:18374441-18374928 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 19 |
| Conread position: | 5-501 |
| Cow position: | chr24:33372211-33372710 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 79 |
| Conread position: | 5-501 |
| Cow position: | chr24:37650328-37650839 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 49 |
| Conread position: | 5-537 |
| Cow position: | chr24:24491361-24490826 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 29 |
| Conread position: | 6-427 |
| Cow position: | chr24:31323938-31324365 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 298 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 67, 86 |
| Conread position: | 7-470 |
| Cow position: | chr24:6149681-6150139 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 107 |
| Conread position: | 7-500 |
| Cow position: | chr24:39483127-39483626 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 75 |
| Conread position: | 7-501 |
| Cow position: | chr24:27844869-27844369 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 107 |
| Conread position: | 7-539 |
| Cow position: | chr24:28303699-28303159 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 105 |
| Conread position: | 33-501 |
| Cow position: | chr24:26929268-26928777 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 319 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 85, 77 |
| Conread position: | 61-495 |
| Cow position: | chr24:1269511-1269935 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 51 |
| Conread position: | 61-501 |
| Cow position: | chr24:36404436-36403992 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 12 |
| Conread position: | 62-470 |
| Cow position: | chr24:27726294-27725878 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 293 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 56, 48 |
| Conread position: | 64-501 |
| Cow position: | chr24:17860539-17860098 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 96 |
| Conread position: | 64-503 |
| Cow position: | chr24:31816297-31816741 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 46 |
| Conread position: | 68-407 |
| Cow position: | chr24:19769213-19769550 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 6, 43 |
| Conread position: | 73-501 |
| Cow position: | chr24:35675264-35675695 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 37 |
| Conread position: | 75-501 |
| Cow position: | chr24:30314313-30313865 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 35 |
| Conread position: | 82-533 |
| Cow position: | chr24:16994624-16995075 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 36, 15 |
| Conread position: | 89-501 |
| Cow position: | chr24:39226735-39227137 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 286 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 29, 21 |
| Conread position: | 92-501 |
| Cow position: | chr24:27608358-27607947 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 68 |
| Conread position: | 115-501 |
| Cow position: | chr24:37299073-37298678 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 101, 30 |
| Conread position: | 127-407 |
| Cow position: | chr24:24457472-24457189 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 94, 34 |
| Conread position: | 127-408 |
| Cow position: | chr24:22224952-22225249 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 282 |
| Conread position: | 129-457 |
| Cow position: | chr24:31359099-31359430 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 270 |
| Conread position: | 136-379 |
| Cow position: | chr24:39833732-39833482 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 136-499 |
| Cow position: | chr24:34396390-34396028 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 116, 17 |
| Conread position: | 137-501 |
| Cow position: | chr24:5633252-5632864 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 79, 267 |
| Conread position: | 139-543 |
| Cow position: | chr24:28990351-28990765 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 285 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 6, 50 |
| Conread position: | 160-429 |
| Cow position: | chr24:30897734-30897455 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 95, 259 |
| Conread position: | 172-501 |
| Cow position: | chr24:19800662-19801003 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 43, 218 |
| Conread position: | 175-501 |
| Cow position: | chr24:18999866-19000207 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 47, 67 |
| Conread position: | 176-333 |
| Cow position: | chr24:17492135-17492287 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 179-480 |
| Cow position: | chr24:18357230-18356910 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 62, 94 |
| Conread position: | 180-501 |
| Cow position: | chr24:37037723-37038055 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 74, 37 |
| Conread position: | 217-501 |
| Cow position: | chr24:27713543-27713246 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 224-501 |
| Cow position: | chr24:28233917-28234205 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 30, 142 |
| Conread position: | 229-501 |
| Cow position: | chr24:29561701-29561415 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 26, 132 |
| Conread position: | 240-438 |
| Cow position: | chr24:39791428-39791630 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 52, 9 |
| Conread position: | 240-534 |
| Cow position: | chr24:39523558-39523251 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 51, 9 |
| Conread position: | 251-499 |
| Cow position: | chr24:230175-230442 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 258-500 |
| Cow position: | chr24:37823434-37823687 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 37, 141 |
| Conread position: | 259-501 |
| Cow position: | chr24:20364503-20364252 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 267-501 |
| Cow position: | chr24:25122268-25122501 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 160, 28 |
| Conread position: | 269-501 |
| Cow position: | chr24:37975066-37974819 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 23, 133 |
| Conread position: | 287-501 |
| Cow position: | chr24:33244336-33244550 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 288-517 |
| Cow position: | chr24:28344326-28344559 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 6, 125 |
| Conread position: | 293-501 |
| Cow position: | chr24:5360666-5360875 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 45, 58 |
Show alignments to all cow chromosomes.