Cow genome map
| Conread name: | rspc030_i12.y1 |
| Conread position: | 2-501 |
| Cow position: | chr26:26888445-26887933 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 10 |
| Conread position: | 4-501 |
| Cow position: | chr26:16783501-16784029 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 147 |
| Conread position: | 5-386 |
| Cow position: | chr26:32653039-32652653 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 36, 101 |
| Conread position: | 5-407 |
| Cow position: | chr26:8700360-8699945 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 110 |
| Conread position: | 5-501 |
| Cow position: | chr26:4585520-4585007 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 167 |
| Conread position: | 5-501 |
| Cow position: | chr26:9604232-9604760 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 342 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 175 |
| Conread position: | 5-501 |
| Cow position: | chr26:20291992-20291488 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 109 |
| Conread position: | 5-501 |
| Cow position: | chr26:33112690-33112181 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 101 |
| Conread position: | 5-501 |
| Cow position: | chr26:33202368-33201866 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 96 |
| Conread position: | 5-502 |
| Cow position: | chr26:12145413-12144911 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 349 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 41, 66 |
| Conread position: | 6-500 |
| Cow position: | chr26:14951461-14950943 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 341 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 36, 216 |
| Conread position: | 6-500 |
| Cow position: | chr26:20260292-20260785 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 336 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 13-435 |
| Cow position: | chr26:27491804-27491371 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 65 |
| Conread position: | 22-501 |
| Cow position: | chr26:18825566-18825079 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 326 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 19, 92 |
| Conread position: | 25-499 |
| Cow position: | chr26:9491641-9492121 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 86 |
| Conread position: | 61-501 |
| Cow position: | chr26:8810882-8811335 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 109 |
| Conread position: | 64-446 |
| Cow position: | chr26:26294435-26294055 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 54, 46 |
| Conread position: | 64-505 |
| Cow position: | chr26:13801864-13802317 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 46 |
| Conread position: | 68-500 |
| Cow position: | chr26:35704142-35704577 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 43 |
| Conread position: | 71-446 |
| Cow position: | chr26:7148538-7148165 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 151, 26 |
| Conread position: | 98-501 |
| Cow position: | chr26:21637250-21636847 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 80 |
| Conread position: | 101-501 |
| Cow position: | chr26:25526036-25526451 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 288 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 108-359 |
| Cow position: | chr26:5306928-5307197 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 116-447 |
| Cow position: | chr26:31605212-31605546 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 243 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 127, 41 |
| Conread position: | 136-385 |
| Cow position: | chr26:16179384-16179642 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 80, 117 |
| Conread position: | 136-435 |
| Cow position: | chr26:22354238-22354544 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 80, 34 |
| Conread position: | 136-499 |
| Cow position: | chr26:13979307-13978928 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 78, 30 |
| Conread position: | 137-409 |
| Cow position: | chr26:25299422-25299703 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 82, 69 |
| Conread position: | 151-495 |
| Cow position: | chr26:22892609-22892249 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 110 |
| Conread position: | 157-446 |
| Cow position: | chr26:23583104-23582805 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 84, 101 |
| Conread position: | 158-500 |
| Cow position: | chr26:28250990-28251357 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 169-501 |
| Cow position: | chr26:20769709-20770055 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 243 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 121, 74 |
| Conread position: | 172-446 |
| Cow position: | chr26:12964839-12964556 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 82, 205 |
| Conread position: | 172-471 |
| Cow position: | chr26:33736693-33736381 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 79, 37 |
| Conread position: | 172-501 |
| Cow position: | chr26:647859-647518 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 243 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 120, 15 |
| Conread position: | 173-337 |
| Cow position: | chr26:31572110-31572278 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 75, 69 |
| Conread position: | 173-501 |
| Cow position: | chr26:9535376-9535718 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 64, 229 |
| Conread position: | 179-501 |
| Cow position: | chr26:14905946-14905612 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 13 |
| Conread position: | 183-446 |
| Cow position: | chr26:19110053-19110323 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 74, 26 |
| Conread position: | 194-501 |
| Cow position: | chr26:12893542-12893225 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 56 |
| Conread position: | 208-492 |
| Cow position: | chr26:24240569-24240879 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 46, 163 |
| Conread position: | 224-500 |
| Cow position: | chr26:14481639-14481363 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 66, 25 |
| Conread position: | 225-445 |
| Cow position: | chr26:7687330-7687106 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 29, 211 |
| Conread position: | 235-508 |
| Cow position: | chr26:23924770-23925055 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 246-501 |
| Cow position: | chr26:5665989-5666245 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 50, 14 |
| Conread position: | 274-501 |
| Cow position: | chr26:19591451-19591683 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 291-501 |
| Cow position: | chr26:34611195-34610982 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 313-501 |
| Cow position: | chr26:32517448-32517263 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
Show alignments to all cow chromosomes.