Cow genome map
Conread name: | rspc030_i12.y1 |
Conread position: | 2-501 |
Cow position: | chr28:4070641-4071151 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 8 |
Conread position: | 4-501 |
Cow position: | chr28:25056649-25057149 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 111 |
Conread position: | 5-407 |
Cow position: | chr28:23675827-23676228 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 278 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 113, 92 |
Conread position: | 5-420 |
Cow position: | chr28:18590949-18591373 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 83 |
Conread position: | 5-436 |
Cow position: | chr28:11752466-11752020 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 402 |
Conread position: | 5-437 |
Cow position: | chr28:21598574-21598130 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 297 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 41, 97 |
Conread position: | 5-489 |
Cow position: | chr28:4138999-4138486 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 339 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 30, 183 |
Conread position: | 5-489 |
Cow position: | chr28:30303508-30303027 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 28 |
Conread position: | 5-491 |
Cow position: | chr28:11585528-11585026 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 17 |
Conread position: | 5-500 |
Cow position: | chr28:3914389-3914897 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 105 |
Conread position: | 5-501 |
Cow position: | chr28:8347401-8347927 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 360 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 43, 121 |
Conread position: | 5-501 |
Cow position: | chr28:10589350-10588840 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 140 |
Conread position: | 5-501 |
Cow position: | chr28:11426857-11426355 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 30 |
Conread position: | 5-501 |
Cow position: | chr28:13473986-13474492 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 95 |
Conread position: | 5-501 |
Cow position: | chr28:16919482-16918981 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 108 |
Conread position: | 5-501 |
Cow position: | chr28:21844635-21845144 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 96 |
Conread position: | 5-501 |
Cow position: | chr28:26614574-26615046 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 99 |
Conread position: | 5-502 |
Cow position: | chr28:661792-662294 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 342 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 36, 124 |
Conread position: | 5-502 |
Cow position: | chr28:3745882-3746391 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 77 |
Conread position: | 5-505 |
Cow position: | chr28:16211418-16210905 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 109 |
Conread position: | 5-508 |
Cow position: | chr28:14997743-14998264 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 96 |
Conread position: | 5-543 |
Cow position: | chr28:22332229-22332769 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 70 |
Conread position: | 6-391 |
Cow position: | chr28:20312954-20313351 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 280 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 38, 109 |
Conread position: | 6-407 |
Cow position: | chr28:21380561-21380969 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 86 |
Conread position: | 6-439 |
Cow position: | chr28:12964257-12964689 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 108 |
Conread position: | 6-480 |
Cow position: | chr28:5203885-5204362 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 50 |
Conread position: | 6-501 |
Cow position: | chr28:8787230-8787732 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 110 |
Conread position: | 7-495 |
Cow position: | chr28:5684385-5684887 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 194 |
Conread position: | 7-500 |
Cow position: | chr28:16346835-16346346 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 57 |
Conread position: | 9-501 |
Cow position: | chr28:26151708-26152204 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 316 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 178, 33 |
Conread position: | 9-531 |
Cow position: | chr28:33884093-33884625 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 354 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 35, 20 |
Conread position: | 13-498 |
Cow position: | chr28:5931034-5931534 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 334 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 28, 107 |
Conread position: | 27-440 |
Cow position: | chr28:31110301-31109880 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 76 |
Conread position: | 33-501 |
Cow position: | chr28:24966099-24966579 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 330 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 85, 64 |
Conread position: | 46-501 |
Cow position: | chr28:23008004-23007549 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 312 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 66, 118 |
Conread position: | 48-499 |
Cow position: | chr28:26743348-26743822 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 315 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 70, 49 |
Conread position: | 51-439 |
Cow position: | chr28:5128998-5128605 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 237, 46 |
Conread position: | 59-463 |
Cow position: | chr28:25596369-25596778 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 232, 103 |
Conread position: | 59-476 |
Cow position: | chr28:3408480-3408054 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 281 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 59, 38 |
Conread position: | 59-501 |
Cow position: | chr28:20963795-20963354 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 292 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 97, 38 |
Conread position: | 60-435 |
Cow position: | chr28:18934191-18934572 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 254 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 25, 5 |
Conread position: | 61-435 |
Cow position: | chr28:19026264-19025887 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 264 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 57, 49 |
Conread position: | 64-407 |
Cow position: | chr28:26922622-26922278 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 241 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 54, 33 |
Conread position: | 66-501 |
Cow position: | chr28:3493040-3492594 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 31 |
Conread position: | 68-501 |
Cow position: | chr28:16370328-16369896 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 29 |
Conread position: | 71-501 |
Cow position: | chr28:26719109-26719523 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 294 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 182, 39 |
Conread position: | 71-508 |
Cow position: | chr28:1099893-1099477 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 300 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 47, 39 |
Conread position: | 73-446 |
Cow position: | chr28:5236849-5236477 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 249 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 151, 38 |
Conread position: | 73-453 |
Cow position: | chr28:2898746-2899123 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 255 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 41, 37 |
Conread position: | 79-534 |
Cow position: | chr28:31841583-31841121 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 309 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 38, 31 |
Conread position: | 83-501 |
Cow position: | chr28:9636696-9636264 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 27 |
Conread position: | 86-499 |
Cow position: | chr28:34430663-34430232 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 284 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 33, 24 |
Conread position: | 88-500 |
Cow position: | chr28:11884757-11884339 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 22 |
Conread position: | 90-480 |
Cow position: | chr28:2132155-2131765 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 246 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 203, 112 |
Conread position: | 97-501 |
Cow position: | chr28:4016304-4016716 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 13 |
Conread position: | 100-420 |
Cow position: | chr28:24017779-24018087 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 214 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 8, 55 |
Conread position: | 102-508 |
Cow position: | chr28:4090263-4089859 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 288 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 152, 11 |
Conread position: | 115-501 |
Cow position: | chr28:5437299-5436893 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 276 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 127, 148 |
Conread position: | 115-501 |
Cow position: | chr28:29416924-29416532 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 172, 123 |
Conread position: | 117-501 |
Cow position: | chr28:12598140-12598529 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 255 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 99, 137 |
Conread position: | 135-435 |
Cow position: | chr28:11829130-11828844 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 121 |
Conread position: | 137-499 |
Cow position: | chr28:30937852-30937492 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 261 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 100, 128 |
Conread position: | 138-543 |
Cow position: | chr28:26982931-26982499 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 280 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 83, 268 |
Conread position: | 139-501 |
Cow position: | chr28:9684504-9684144 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 258 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 151, 94 |
Conread position: | 145-329 |
Cow position: | chr28:657625-657439 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 140 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 154, 15 |
Conread position: | 168-413 |
Cow position: | chr28:2872760-2873015 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 180 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 86, 6 |
Conread position: | 172-501 |
Cow position: | chr28:24082116-24082463 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 244 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 58, 16 |
Conread position: | 194-446 |
Cow position: | chr28:8140350-8140609 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 176 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 41, 209 |
Conread position: | 206-500 |
Cow position: | chr28:11079186-11079492 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 217 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 40, 141 |
Conread position: | 219-502 |
Cow position: | chr28:19564335-19564041 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 201 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 70, 199 |
Conread position: | 224-435 |
Cow position: | chr28:16246165-16245947 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 151 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 65, 39 |
Conread position: | 224-501 |
Cow position: | chr28:4181900-4182194 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 204 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 18, 250 |
Conread position: | 226-499 |
Cow position: | chr28:22813165-22813439 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 186 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 67, 18 |
Conread position: | 240-480 |
Cow position: | chr28:7350576-7350825 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 176 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 53, 9 |
Conread position: | 244-501 |
Cow position: | chr28:7619231-7618967 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 184 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 44, 114 |
Conread position: | 251-493 |
Cow position: | chr28:3740809-3741054 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 167 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 42, 100 |
Conread position: | 258-500 |
Cow position: | chr28:32358055-32358296 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 168 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 179, 22 |
Conread position: | 258-501 |
Cow position: | chr28:4013022-4013276 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 182 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 260-497 |
Cow position: | chr28:7132138-7131902 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 169 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 179, 31 |
Conread position: | 282-501 |
Cow position: | chr28:5254839-5255064 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 161 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 17, 10 |
Conread position: | 286-490 |
Cow position: | chr28:3445511-3445298 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 152 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 133, 25 |
Conread position: | 288-480 |
Cow position: | chr28:11816696-11816507 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 140 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 11, 63 |
Conread position: | 297-501 |
Cow position: | chr28:29850835-29850629 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 142 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 141, 0 |
Conread position: | 298-501 |
Cow position: | chr28:8304228-8304435 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 147 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 41, 60 |
Conread position: | 301-543 |
Cow position: | chr28:16879557-16879808 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 168 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 43, 49 |
Conread position: | 313-501 |
Cow position: | chr28:30902122-30902314 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 138 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 25, 37 |
Show alignments to all cow chromosomes.