Cow genome map


           Conread name:
           rspc030_i12.y1
        

               Conread position:
               2-501
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 8
               

               Conread position:
               4-501
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 111
               

               Conread position:
               5-407
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               278
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               113, 92
               

               Conread position:
               5-420
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 83
               

               Conread position:
               5-436
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 402
               

               Conread position:
               5-437
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               297
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               41, 97
               

               Conread position:
               5-489
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               339
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               30, 183
               

               Conread position:
               5-489
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 28
               

               Conread position:
               5-491
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 17
               

               Conread position:
               5-500
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 105
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               360
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               43, 121
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 140
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 30
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 95
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 108
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 96
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 99
               

               Conread position:
               5-502
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               342
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               36, 124
               

               Conread position:
               5-502
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 77
               

               Conread position:
               5-505
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 109
               

               Conread position:
               5-508
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 96
               

               Conread position:
               5-543
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 70
               

               Conread position:
               6-391
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               280
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               38, 109
               

               Conread position:
               6-407
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 86
               

               Conread position:
               6-439
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 108
               

               Conread position:
               6-480
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 50
               

               Conread position:
               6-501
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 110
               

               Conread position:
               7-495
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 194
               

               Conread position:
               7-500
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 57
               

               Conread position:
               9-501
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               316
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               178, 33
               

               Conread position:
               9-531
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               354
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               35, 20
               

               Conread position:
               13-498
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               334
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               28, 107
               

               Conread position:
               27-440
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 76
               

               Conread position:
               33-501
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               330
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               85, 64
               

               Conread position:
               46-501
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               312
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               66, 118
               

               Conread position:
               48-499
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               315
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               70, 49
               

               Conread position:
               51-439
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 46
               

               Conread position:
               59-463
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 103
               

               Conread position:
               59-476
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               281
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               59, 38
               

               Conread position:
               59-501
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               292
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               97, 38
               

               Conread position:
               60-435
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               25, 5
               

               Conread position:
               61-435
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               264
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               57, 49
               

               Conread position:
               64-407
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               54, 33
               

               Conread position:
               66-501
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 31
               

               Conread position:
               68-501
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 29
               

               Conread position:
               71-501
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               294
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               182, 39
               

               Conread position:
               71-508
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               300
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               47, 39
               

               Conread position:
               73-446
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               151, 38
               

               Conread position:
               73-453
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               41, 37
               

               Conread position:
               79-534
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               309
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               38, 31
               

               Conread position:
               83-501
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 27
               

               Conread position:
               86-499
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               284
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               33, 24
               

               Conread position:
               88-500
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 22
               

               Conread position:
               90-480
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               203, 112
               

               Conread position:
               97-501
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 13
               

               Conread position:
               100-420
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 55
               

               Conread position:
               102-508
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               288
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               152, 11
               

               Conread position:
               115-501
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               276
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               127, 148
               

               Conread position:
               115-501
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 123
               

               Conread position:
               117-501
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               99, 137
               

               Conread position:
               135-435
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 121
               

               Conread position:
               137-499
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               261
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               100, 128
               

               Conread position:
               138-543
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               83, 268
               

               Conread position:
               139-501
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               151, 94
               

               Conread position:
               145-329
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               154, 15
               

               Conread position:
               168-413
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               86, 6
               

               Conread position:
               172-501
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               58, 16
               

               Conread position:
               194-446
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 209
               

               Conread position:
               206-500
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 141
               

               Conread position:
               219-502
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               70, 199
               

               Conread position:
               224-435
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               65, 39
               

               Conread position:
               224-501
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               18, 250
               

               Conread position:
               226-499
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               67, 18
               

               Conread position:
               240-480
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               53, 9
               

               Conread position:
               244-501
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               44, 114
               

               Conread position:
               251-493
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               42, 100
               

               Conread position:
               258-500
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               179, 22
               

               Conread position:
               258-501
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               260-497
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               179, 31
               

               Conread position:
               282-501
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               286-490
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               133, 25
               

               Conread position:
               288-480
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               11, 63
               

               Conread position:
               297-501
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               298-501
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               41, 60
               

               Conread position:
               301-543
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               43, 49
               

               Conread position:
               313-501
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               25, 37
               
Show alignments to all cow chromosomes.