Cow genome map
Conread name: | rspc030_i12.y1 |
Conread position: | 2-501 |
Cow position: | chr4:3687589-3688109 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 8 |
Conread position: | 2-501 |
Cow position: | chr4:48485657-48486176 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 7 |
Conread position: | 5-359 |
Cow position: | chr4:24458433-24458073 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 98 |
Conread position: | 5-400 |
Cow position: | chr4:51898668-51899076 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 403 |
Conread position: | 5-407 |
Cow position: | chr4:16799522-16799108 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 279 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 197, 94 |
Conread position: | 5-427 |
Cow position: | chr4:12903483-12903919 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 110 |
Conread position: | 5-435 |
Cow position: | chr4:3850223-3850657 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 225, 92 |
Conread position: | 5-435 |
Cow position: | chr4:7704643-7704219 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 284 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 30, 111 |
Conread position: | 5-437 |
Cow position: | chr4:53100472-53100909 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 114 |
Conread position: | 5-440 |
Cow position: | chr4:11872246-11871811 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 109 |
Conread position: | 5-446 |
Cow position: | chr4:9815683-9815232 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 106 |
Conread position: | 5-485 |
Cow position: | chr4:68387461-68387952 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 93 |
Conread position: | 5-486 |
Cow position: | chr4:21392131-21391658 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 43 |
Conread position: | 5-496 |
Cow position: | chr4:42424134-42423630 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 17 |
Conread position: | 5-498 |
Cow position: | chr4:5610403-5609914 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 108 |
Conread position: | 5-499 |
Cow position: | chr4:275132-275622 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 96 |
Conread position: | 5-499 |
Cow position: | chr4:40414965-40414450 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 146 |
Conread position: | 5-500 |
Cow position: | chr4:21531963-21531461 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 44 |
Conread position: | 5-500 |
Cow position: | chr4:53207974-53208462 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 43 |
Conread position: | 5-501 |
Cow position: | chr4:4085463-4084928 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 11 |
Conread position: | 5-501 |
Cow position: | chr4:20328046-20327543 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 106 |
Conread position: | 5-501 |
Cow position: | chr4:51850865-51851392 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 106 |
Conread position: | 5-501 |
Cow position: | chr4:61897866-61897372 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 81 |
Conread position: | 5-532 |
Cow position: | chr4:4319476-4318943 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 79 |
Conread position: | 6-390 |
Cow position: | chr4:39231856-39231460 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 108 |
Conread position: | 6-506 |
Cow position: | chr4:33971229-33970719 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 29 |
Conread position: | 7-336 |
Cow position: | chr4:22215988-22215646 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 109 |
Conread position: | 7-337 |
Cow position: | chr4:2422252-2422584 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 105 |
Conread position: | 7-407 |
Cow position: | chr4:24002301-24001889 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 107 |
Conread position: | 7-437 |
Cow position: | chr4:509230-508801 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 104 |
Conread position: | 7-501 |
Cow position: | chr4:21064701-21065205 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 100 |
Conread position: | 7-501 |
Cow position: | chr4:56240178-56239684 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 108 |
Conread position: | 9-480 |
Cow position: | chr4:66256356-66256841 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 321 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 35, 53 |
Conread position: | 12-528 |
Cow position: | chr4:37915656-37915132 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 80 |
Conread position: | 14-420 |
Cow position: | chr4:38952234-38952644 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 87 |
Conread position: | 15-434 |
Cow position: | chr4:20603-21017 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 279 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 21, 69 |
Conread position: | 22-444 |
Cow position: | chr4:23599856-23600280 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 89 |
Conread position: | 43-501 |
Cow position: | chr4:54937594-54938060 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 159 |
Conread position: | 45-453 |
Cow position: | chr4:36730900-36731312 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 65 |
Conread position: | 48-403 |
Cow position: | chr4:45775628-45775264 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 241 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 70, 54 |
Conread position: | 53-510 |
Cow position: | chr4:3340670-3341144 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 319 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 203, 5 |
Conread position: | 55-446 |
Cow position: | chr4:7847547-7847163 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 254 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 161, 30 |
Conread position: | 58-391 |
Cow position: | chr4:44451253-44451578 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 214 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 147, 108 |
Conread position: | 59-381 |
Cow position: | chr4:20298993-20299326 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 52 |
Conread position: | 64-501 |
Cow position: | chr4:59785045-59785500 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 47 |
Conread position: | 65-337 |
Cow position: | chr4:19438188-19438473 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 213 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 191, 105 |
Conread position: | 65-495 |
Cow position: | chr4:28772337-28771895 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 45 |
Conread position: | 66-391 |
Cow position: | chr4:46550115-46550442 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 44 |
Conread position: | 66-427 |
Cow position: | chr4:47348563-47348924 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 257 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 52, 44 |
Conread position: | 71-453 |
Cow position: | chr4:19699835-19700217 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 227 |
Conread position: | 71-508 |
Cow position: | chr4:8769846-8770281 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 292 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 46, 26 |
Conread position: | 80-392 |
Cow position: | chr4:49089539-49089840 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 219 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 37, 30 |
Conread position: | 81-471 |
Cow position: | chr4:62921111-62920726 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 264 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 156, 70 |
Conread position: | 84-445 |
Cow position: | chr4:7808327-7808687 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 260 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 24, 13 |
Conread position: | 86-444 |
Cow position: | chr4:58881215-58880849 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 11 |
Conread position: | 88-423 |
Cow position: | chr4:21233118-21232779 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 62 |
Conread position: | 88-501 |
Cow position: | chr4:29291275-29291686 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 22 |
Conread position: | 90-501 |
Cow position: | chr4:26659060-26659480 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 294 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 29, 20 |
Conread position: | 103-337 |
Cow position: | chr4:19463258-19463504 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 182 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 15, 7 |
Conread position: | 108-536 |
Cow position: | chr4:36290379-36290837 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 310 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 10, 441 |
Conread position: | 114-500 |
Cow position: | chr4:59277701-59277295 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 260 |
Conread position: | 118-501 |
Cow position: | chr4:38935141-38935538 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 60 |
Conread position: | 129-446 |
Cow position: | chr4:51768906-51769219 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 221 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 94, 43 |
Conread position: | 129-530 |
Cow position: | chr4:38944471-38944048 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 290 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 101, 232 |
Conread position: | 135-393 |
Cow position: | chr4:11331889-11332161 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 208 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 14, 22 |
Conread position: | 136-501 |
Cow position: | chr4:13344342-13344716 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 263 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 26, 119 |
Conread position: | 136-501 |
Cow position: | chr4:68805828-68806183 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 248 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 265, 53 |
Conread position: | 138-446 |
Cow position: | chr4:65175341-65175030 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 202 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 8, 124 |
Conread position: | 138-533 |
Cow position: | chr4:17774547-17774153 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 279 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 116, 7 |
Conread position: | 156-501 |
Cow position: | chr4:45077252-45076899 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 239 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 133, 27 |
Conread position: | 159-501 |
Cow position: | chr4:3421447-3421804 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 253 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 131, 95 |
Conread position: | 160-501 |
Cow position: | chr4:34022766-34022406 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 250 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 94, 202 |
Conread position: | 169-435 |
Cow position: | chr4:59377743-59378015 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 184 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 13, 85 |
Conread position: | 174-446 |
Cow position: | chr4:19501249-19500977 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 193 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 68, 85 |
Conread position: | 187-501 |
Cow position: | chr4:48409418-48409105 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 225 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 55, 63 |
Conread position: | 188-499 |
Cow position: | chr4:19118855-19119197 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 226 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 192-501 |
Cow position: | chr4:20027248-20026925 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 225 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 29, 66 |
Conread position: | 193-434 |
Cow position: | chr4:54927586-54927335 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 170 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 59, 167 |
Conread position: | 204-501 |
Cow position: | chr4:52832153-52831835 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 220 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 50, 59 |
Conread position: | 209-427 |
Cow position: | chr4:48396924-48396698 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 161 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 45, 76 |
Conread position: | 258-501 |
Cow position: | chr4:60719022-60719272 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 174 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 23, 172 |
Conread position: | 264-440 |
Cow position: | chr4:19323901-19324085 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 136 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 26, 94 |
Conread position: | 264-501 |
Cow position: | chr4:65463568-65463333 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 171 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 37, 78 |
Conread position: | 267-499 |
Cow position: | chr4:59002202-59001960 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 167 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 25, 99 |
Conread position: | 290-492 |
Cow position: | chr4:38210014-38209804 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 148 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 147, 0 |
Conread position: | 299-498 |
Cow position: | chr4:44903264-44903461 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 137 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 156, 62 |
Conread position: | 304-501 |
Cow position: | chr4:21506981-21506786 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 140 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 34, 46 |
Show alignments to all cow chromosomes.