Cow genome map


           Conread name:
           rspc030_i12.y1
        

               Conread position:
               4-397
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 108
               

               Conread position:
               4-431
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               297
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               37, 100
               

               Conread position:
               5-295
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               43, 33
               

               Conread position:
               5-391
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 109
               

               Conread position:
               5-392
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 43
               

               Conread position:
               5-419
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               292
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               113, 26
               

               Conread position:
               5-427
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 109
               

               Conread position:
               5-436
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 109
               

               Conread position:
               5-492
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 96
               

               Conread position:
               5-492
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 77
               

               Conread position:
               5-500
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 52
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               332
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               30, 61
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 17
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 281
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 279
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 61
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 128
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 87
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 96
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 59
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 121
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               342
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               19, 103
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 96
               

               Conread position:
               6-392
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 8
               

               Conread position:
               6-446
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 116
               

               Conread position:
               6-500
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 72
               

               Conread position:
               6-501
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 106
               

               Conread position:
               6-501
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               338
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               48, 58
               

               Conread position:
               7-408
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               282, 41
               

               Conread position:
               7-414
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               281
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               47, 91
               

               Conread position:
               7-436
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               285
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               46, 93
               

               Conread position:
               7-501
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 21
               

               Conread position:
               7-529
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 107
               

               Conread position:
               7-531
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 41
               

               Conread position:
               8-335
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 67
               

               Conread position:
               13-501
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 98
               

               Conread position:
               21-501
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 151
               

               Conread position:
               30-499
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 96
               

               Conread position:
               37-501
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 17
               

               Conread position:
               38-498
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               313
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               80, 72
               

               Conread position:
               48-295
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               172, 44
               

               Conread position:
               48-407
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 169
               

               Conread position:
               51-386
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               240
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               67, 59
               

               Conread position:
               60-433
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               60-446
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 50
               

               Conread position:
               60-499
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 37
               

               Conread position:
               64-501
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 46
               

               Conread position:
               64-501
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 24
               

               Conread position:
               65-435
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 46
               

               Conread position:
               65-499
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               293
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               53, 37
               

               Conread position:
               71-435
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               46, 39
               

               Conread position:
               72-539
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               73-501
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 34
               

               Conread position:
               78-435
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               40, 32
               

               Conread position:
               79-534
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 424
               

               Conread position:
               81-437
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               132, 16
               

               Conread position:
               81-499
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 16
               

               Conread position:
               84-407
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               34, 26
               

               Conread position:
               89-435
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 21
               

               Conread position:
               89-501
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               29, 8
               

               Conread position:
               92-290
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               27, 18
               

               Conread position:
               95-507
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 208
               

               Conread position:
               107-407
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               226
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               6, 301
               

               Conread position:
               108-501
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 254
               

               Conread position:
               115-541
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 50
               

               Conread position:
               118-435
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               129, 42
               

               Conread position:
               118-541
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 246
               

               Conread position:
               127-436
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               136, 35
               

               Conread position:
               127-472
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 46
               

               Conread position:
               136-435
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               114, 133
               

               Conread position:
               136-435
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               99, 117
               

               Conread position:
               136-501
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               255
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               155, 36
               

               Conread position:
               137-482
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               245
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               155, 130
               

               Conread position:
               137-501
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               259
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               117, 82
               

               Conread position:
               145-407
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               155, 25
               

               Conread position:
               147-501
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               110, 39
               

               Conread position:
               147-502
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               15, 42
               

               Conread position:
               160-437
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               131, 30
               

               Conread position:
               161-501
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               240
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               89, 68
               

               Conread position:
               165-431
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               86, 131
               

               Conread position:
               168-500
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               34, 197
               

               Conread position:
               172-378
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               172-499
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               49, 136
               

               Conread position:
               173-501
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               140, 80
               

               Conread position:
               175-508
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               14, 70
               

               Conread position:
               176-436
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               75, 126
               

               Conread position:
               178-501
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               64, 10
               

               Conread position:
               196-502
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               54, 168
               

               Conread position:
               214-501
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 59
               

               Conread position:
               240-501
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               52, 9
               

               Conread position:
               258-501
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               34, 100
               

               Conread position:
               266-501
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               266-501
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 75
               

               Conread position:
               278-501
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 72
               

               Conread position:
               287-501
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               114, 16
               

               Conread position:
               287-501
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               290-499
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               54, 60
               

               Conread position:
               292-501
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               111, 68
               

               Conread position:
               308-492
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               313-501
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               90, 81
               

               Conread position:
               349-501
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               88, 0
               
Show alignments to all cow chromosomes.