Cow genome map
Conread name: | rspc030_i12.y1 |
Conread position: | 5-378 |
Cow position: | chr6:1944443-1944809 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 97 |
Conread position: | 5-386 |
Cow position: | chr6:60859590-60859197 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 299 |
Conread position: | 5-391 |
Cow position: | chr6:28811282-28810889 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 265 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 43, 110 |
Conread position: | 5-437 |
Cow position: | chr6:24004260-24004691 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 295 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 43, 102 |
Conread position: | 5-439 |
Cow position: | chr6:12550981-12551427 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 96 |
Conread position: | 5-455 |
Cow position: | chr6:10176585-10176131 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 93 |
Conread position: | 5-492 |
Cow position: | chr6:9008894-9008407 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 49 |
Conread position: | 5-495 |
Cow position: | chr6:13688098-13687594 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 167 |
Conread position: | 5-495 |
Cow position: | chr6:32121624-32122117 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 109 |
Conread position: | 5-498 |
Cow position: | chr6:45690896-45690393 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 112 |
Conread position: | 5-499 |
Cow position: | chr6:12337698-12338216 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 96 |
Conread position: | 5-500 |
Cow position: | chr6:15305302-15305798 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 35 |
Conread position: | 5-501 |
Cow position: | chr6:16699975-16700482 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 106 |
Conread position: | 5-501 |
Cow position: | chr6:17414740-17414222 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 111 |
Conread position: | 5-501 |
Cow position: | chr6:26728813-26728316 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 96 |
Conread position: | 5-501 |
Cow position: | chr6:32867493-32866993 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 109 |
Conread position: | 5-501 |
Cow position: | chr6:49398904-49398401 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 110 |
Conread position: | 5-508 |
Cow position: | chr6:46465541-46466053 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 177 |
Conread position: | 6-429 |
Cow position: | chr6:4864824-4864400 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 283 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 35, 95 |
Conread position: | 6-445 |
Cow position: | chr6:54867226-54867678 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 124 |
Conread position: | 7-499 |
Cow position: | chr6:35725807-35726316 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 318 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 41, 84 |
Conread position: | 7-501 |
Cow position: | chr6:17557090-17557603 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 330 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 41, 95 |
Conread position: | 7-508 |
Cow position: | chr6:10106285-10105748 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 111 |
Conread position: | 9-500 |
Cow position: | chr6:54132540-54133038 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 282, 44 |
Conread position: | 12-501 |
Cow position: | chr6:22332678-22332167 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 316 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 29, 407 |
Conread position: | 36-533 |
Cow position: | chr6:52478677-52478150 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 22 |
Conread position: | 37-500 |
Cow position: | chr6:31535823-31535346 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 62 |
Conread position: | 43-435 |
Cow position: | chr6:9736884-9736508 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 54 |
Conread position: | 45-435 |
Cow position: | chr6:54991235-54990848 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 207, 52 |
Conread position: | 45-501 |
Cow position: | chr6:38853901-38853428 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 65 |
Conread position: | 48-483 |
Cow position: | chr6:26915090-26915538 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 125 |
Conread position: | 49-420 |
Cow position: | chr6:20098203-20097821 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 61 |
Conread position: | 51-439 |
Cow position: | chr6:13040215-13040595 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 60 |
Conread position: | 60-427 |
Cow position: | chr6:60350527-60350147 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 50 |
Conread position: | 61-337 |
Cow position: | chr6:9322932-9323204 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 199 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 57, 49 |
Conread position: | 61-501 |
Cow position: | chr6:19401635-19402073 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 302 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 158, 104 |
Conread position: | 63-501 |
Cow position: | chr6:49422001-49421568 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 299 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 53, 34 |
Conread position: | 64-501 |
Cow position: | chr6:60144401-60143971 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 298 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 229, 102 |
Conread position: | 65-499 |
Cow position: | chr6:46860390-46859944 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 32 |
Conread position: | 66-502 |
Cow position: | chr6:38207717-38207257 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 31 |
Conread position: | 66-506 |
Cow position: | chr6:4383271-4383707 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 31 |
Conread position: | 67-407 |
Cow position: | chr6:23248184-23247841 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 43 |
Conread position: | 68-437 |
Cow position: | chr6:55282509-55282138 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 29 |
Conread position: | 70-499 |
Cow position: | chr6:8965872-8966314 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 36 |
Conread position: | 71-437 |
Cow position: | chr6:28977248-28976885 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 28 |
Conread position: | 71-499 |
Cow position: | chr6:36202611-36203047 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 86 |
Conread position: | 71-499 |
Cow position: | chr6:44194762-44194330 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 212, 93 |
Conread position: | 72-449 |
Cow position: | chr6:53651824-53652205 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 39 |
Conread position: | 72-501 |
Cow position: | chr6:53460787-53460343 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 25 |
Conread position: | 73-294 |
Cow position: | chr6:1889296-1889084 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 152 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 49, 24 |
Conread position: | 73-499 |
Cow position: | chr6:35435788-35436213 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 285 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 22, 98 |
Conread position: | 77-447 |
Cow position: | chr6:6400739-6401113 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 274 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 41, 9 |
Conread position: | 83-501 |
Cow position: | chr6:53025003-53024583 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 298 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 35, 27 |
Conread position: | 86-436 |
Cow position: | chr6:528478-528130 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 233 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 32, 20 |
Conread position: | 86-501 |
Cow position: | chr6:10400097-10399680 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 292 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 31, 24 |
Conread position: | 93-502 |
Cow position: | chr6:21456885-21456448 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 23 |
Conread position: | 94-501 |
Cow position: | chr6:29484897-29485311 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 195, 18 |
Conread position: | 103-529 |
Cow position: | chr6:47574719-47575145 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 70 |
Conread position: | 116-501 |
Cow position: | chr6:54936405-54936785 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 257 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 49, 25 |
Conread position: | 128-501 |
Cow position: | chr6:62669710-62670099 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 263 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 17, 30 |
Conread position: | 129-453 |
Cow position: | chr6:48112045-48112366 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 232 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 110, 45 |
Conread position: | 136-399 |
Cow position: | chr6:61608355-61608628 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 269 |
Conread position: | 136-501 |
Cow position: | chr6:7128552-7128176 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 257 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 106, 24 |
Conread position: | 136-504 |
Cow position: | chr6:60739863-60740241 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 253 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 85, 36 |
Conread position: | 140-435 |
Cow position: | chr6:46283146-46282851 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 212 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 149, 43 |
Conread position: | 153-500 |
Cow position: | chr6:60118011-60118369 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 233 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 68, 21 |
Conread position: | 155-471 |
Cow position: | chr6:38640094-38640432 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 229 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 86, 219 |
Conread position: | 156-495 |
Cow position: | chr6:29000058-28999735 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 238 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 211, 30 |
Conread position: | 168-358 |
Cow position: | chr6:37376647-37376438 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 154 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 170-439 |
Cow position: | chr6:50975936-50976205 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 185 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 119, 73 |
Conread position: | 170-499 |
Cow position: | chr6:7119732-7119404 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 220 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 118, 72 |
Conread position: | 170-501 |
Cow position: | chr6:23402111-23401767 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 225 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 84, 49 |
Conread position: | 174-501 |
Cow position: | chr6:22850363-22850024 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 227 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 42, 83 |
Conread position: | 182-501 |
Cow position: | chr6:59603317-59602987 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 222 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 60, 73 |
Conread position: | 196-420 |
Cow position: | chr6:66375426-66375195 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 158 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 51, 205 |
Conread position: | 214-446 |
Cow position: | chr6:23466107-23465871 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 165 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 23, 157 |
Conread position: | 219-495 |
Cow position: | chr6:694220-693923 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 202 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 75, 137 |
Conread position: | 219-500 |
Cow position: | chr6:17068722-17068428 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 202 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 20, 278 |
Conread position: | 220-447 |
Cow position: | chr6:29248419-29248640 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 160 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 34, 80 |
Conread position: | 222-501 |
Cow position: | chr6:18118122-18117823 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 204 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 30, 143 |
Conread position: | 224-501 |
Cow position: | chr6:50504389-50504684 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 202 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 24, 32 |
Conread position: | 240-541 |
Cow position: | chr6:60468190-60468497 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 213 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 50, 8 |
Conread position: | 245-501 |
Cow position: | chr6:2078863-2078588 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 187 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 258-498 |
Cow position: | chr6:37466071-37466302 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 171 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 118, 36 |
Conread position: | 264-500 |
Cow position: | chr6:48097626-48097376 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 176 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 29, 234 |
Conread position: | 267-501 |
Cow position: | chr6:30023872-30024105 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 175 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 77, 31 |
Conread position: | 269-501 |
Cow position: | chr6:53546016-53546257 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 170 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 31, 130 |
Conread position: | 313-501 |
Cow position: | chr6:23938091-23938279 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 130 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.