Cow genome map


           Conread name:
           rspc030_i12.y1
        

               Conread position:
               5-378
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 97
               

               Conread position:
               5-386
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 299
               

               Conread position:
               5-391
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               265
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               43, 110
               

               Conread position:
               5-437
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               295
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               43, 102
               

               Conread position:
               5-439
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 96
               

               Conread position:
               5-455
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 93
               

               Conread position:
               5-492
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 49
               

               Conread position:
               5-495
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 167
               

               Conread position:
               5-495
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 109
               

               Conread position:
               5-498
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 112
               

               Conread position:
               5-499
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 96
               

               Conread position:
               5-500
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 106
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 111
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 96
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 109
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 110
               

               Conread position:
               5-508
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 177
               

               Conread position:
               6-429
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               283
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               35, 95
               

               Conread position:
               6-445
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 124
               

               Conread position:
               7-499
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               318
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               41, 84
               

               Conread position:
               7-501
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               330
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               41, 95
               

               Conread position:
               7-508
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 111
               

               Conread position:
               9-500
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 44
               

               Conread position:
               12-501
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               316
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               29, 407
               

               Conread position:
               36-533
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 22
               

               Conread position:
               37-500
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 62
               

               Conread position:
               43-435
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 54
               

               Conread position:
               45-435
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 52
               

               Conread position:
               45-501
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 65
               

               Conread position:
               48-483
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 125
               

               Conread position:
               49-420
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 61
               

               Conread position:
               51-439
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 60
               

               Conread position:
               60-427
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 50
               

               Conread position:
               61-337
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               57, 49
               

               Conread position:
               61-501
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               302
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               158, 104
               

               Conread position:
               63-501
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               299
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               53, 34
               

               Conread position:
               64-501
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               298
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               229, 102
               

               Conread position:
               65-499
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 32
               

               Conread position:
               66-502
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 31
               

               Conread position:
               66-506
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 31
               

               Conread position:
               67-407
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 43
               

               Conread position:
               68-437
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 29
               

               Conread position:
               70-499
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 36
               

               Conread position:
               71-437
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 28
               

               Conread position:
               71-499
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 86
               

               Conread position:
               71-499
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 93
               

               Conread position:
               72-449
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 39
               

               Conread position:
               72-501
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 25
               

               Conread position:
               73-294
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               49, 24
               

               Conread position:
               73-499
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               22, 98
               

               Conread position:
               77-447
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               41, 9
               

               Conread position:
               83-501
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               298
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               35, 27
               

               Conread position:
               86-436
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               32, 20
               

               Conread position:
               86-501
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               292
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               31, 24
               

               Conread position:
               93-502
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 23
               

               Conread position:
               94-501
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 18
               

               Conread position:
               103-529
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 70
               

               Conread position:
               116-501
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               257
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               49, 25
               

               Conread position:
               128-501
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               17, 30
               

               Conread position:
               129-453
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               110, 45
               

               Conread position:
               136-399
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 269
               

               Conread position:
               136-501
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               106, 24
               

               Conread position:
               136-504
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               253
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               85, 36
               

               Conread position:
               140-435
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               149, 43
               

               Conread position:
               153-500
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               68, 21
               

               Conread position:
               155-471
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               86, 219
               

               Conread position:
               156-495
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               238
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               211, 30
               

               Conread position:
               168-358
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               170-439
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               119, 73
               

               Conread position:
               170-499
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               118, 72
               

               Conread position:
               170-501
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               84, 49
               

               Conread position:
               174-501
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               42, 83
               

               Conread position:
               182-501
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               60, 73
               

               Conread position:
               196-420
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               51, 205
               

               Conread position:
               214-446
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               23, 157
               

               Conread position:
               219-495
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               75, 137
               

               Conread position:
               219-500
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               20, 278
               

               Conread position:
               220-447
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               34, 80
               

               Conread position:
               222-501
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               30, 143
               

               Conread position:
               224-501
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               24, 32
               

               Conread position:
               240-541
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               50, 8
               

               Conread position:
               245-501
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               258-498
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               118, 36
               

               Conread position:
               264-500
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 234
               

               Conread position:
               267-501
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               77, 31
               

               Conread position:
               269-501
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               31, 130
               

               Conread position:
               313-501
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.