Cow genome map

Conread name: rspc030_i12.y1

Conread position: 4-480
Cow position:
Alignm length: 500
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 177

Conread position: 4-543
Cow position:
Alignm length: 567
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 406

Conread position: 5-358
Cow position:
Alignm length: 371
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 111

Conread position: 5-371
Cow position:
Alignm length: 375
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 212

Conread position: 5-384
Cow position:
Alignm length: 390
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 105

Conread position: 5-386
Cow position:
Alignm length: 399
Alignm identity: 276
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 43, 96

Conread position: 5-386
Cow position:
Alignm length: 403
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 111

Conread position: 5-391
Cow position:
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 98

Conread position: 5-429
Cow position:
Alignm length: 437
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 66

Conread position: 5-435
Cow position:
Alignm length: 441
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 81

Conread position: 5-436
Cow position:
Alignm length: 448
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 31

Conread position: 5-437
Cow position:
Alignm length: 450
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 14

Conread position: 5-439
Cow position:
Alignm length: 448
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 123

Conread position: 5-480
Cow position:
Alignm length: 487
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 50

Conread position: 5-480
Cow position:
Alignm length: 496
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 71

Conread position: 5-498
Cow position:
Alignm length: 518
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 111

Conread position: 5-499
Cow position:
Alignm length: 515
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 24

Conread position: 5-499
Cow position:
Alignm length: 514
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 20

Conread position: 5-499
Cow position:
Alignm length: 512
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 350

Conread position: 5-500
Cow position:
Alignm length: 515
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 43

Conread position: 5-501
Cow position:
Alignm length: 513
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 85

Conread position: 5-501
Cow position:
Alignm length: 514
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 84

Conread position: 5-501
Cow position:
Alignm length: 527
Alignm identity: 347
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 43, 101

Conread position: 5-501
Cow position:
Alignm length: 519
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 96

Conread position: 5-501
Cow position:
Alignm length: 517
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 406

Conread position: 5-501
Cow position:
Alignm length: 511
Alignm identity: 334
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 39, 22

Conread position: 5-501
Cow position:
Alignm length: 509
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 43

Conread position: 5-501
Cow position:
Alignm length: 512
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 43

Conread position: 5-501
Cow position:
Alignm length: 520
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 89

Conread position: 5-501
Cow position:
Alignm length: 520
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 111

Conread position: 5-502
Cow position:
Alignm length: 517
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 93

Conread position: 5-508
Cow position:
Alignm length: 523
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 112

Conread position: 6-399
Cow position:
Alignm length: 412
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 108

Conread position: 6-427
Cow position:
Alignm length: 440
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 110

Conread position: 6-437
Cow position:
Alignm length: 449
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 109

Conread position: 6-439
Cow position:
Alignm length: 447
Alignm identity: 291
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 43, 113

Conread position: 6-445
Cow position:
Alignm length: 454
Alignm identity: 305
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 35, 82

Conread position: 6-501
Cow position:
Alignm length: 521
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 62

Conread position: 6-541
Cow position:
Alignm length: 553
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 108

Conread position: 7-420
Cow position:
Alignm length: 426
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 100

Conread position: 7-446
Cow position:
Alignm length: 459
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 63

Conread position: 8-439
Cow position:
Alignm length: 452
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 103

Conread position: 8-498
Cow position:
Alignm length: 525
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 102

Conread position: 8-501
Cow position:
Alignm length: 516
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 159

Conread position: 9-435
Cow position:
Alignm length: 436
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 105

Conread position: 13-501
Cow position:
Alignm length: 511
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 98

Conread position: 19-481
Cow position:
Alignm length: 490
Alignm identity: 325
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 22, 95

Conread position: 21-501
Cow position:
Alignm length: 495
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 80

Conread position: 36-501
Cow position:
Alignm length: 482
Alignm identity: 318
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 227, 28

Conread position: 39-467
Cow position:
Alignm length: 440
Alignm identity: 284
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 182, 71

Conread position: 42-446
Cow position:
Alignm length: 412
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 68

Conread position: 45-501
Cow position:
Alignm length: 476
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 135

Conread position: 48-295
Cow position:
Alignm length: 252
Alignm identity: 189
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 68, 113

Conread position: 48-493
Cow position:
Alignm length: 451
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 62

Conread position: 50-372
Cow position:
Alignm length: 339
Alignm identity: 238
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 68, 60

Conread position: 53-501
Cow position:
Alignm length: 456
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 59

Conread position: 64-427
Cow position:
Alignm length: 370
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 47

Conread position: 64-430
Cow position:
Alignm length: 372
Alignm identity: 246
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 54, 46

Conread position: 64-495
Cow position:
Alignm length: 439
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 46

Conread position: 64-502
Cow position:
Alignm length: 447
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 373, 96

Conread position: 65-446
Cow position:
Alignm length: 394
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 13

Conread position: 69-446
Cow position:
Alignm length: 380
Alignm identity: 247
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 220, 41

Conread position: 71-498
Cow position:
Alignm length: 435
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 39

Conread position: 71-501
Cow position:
Alignm length: 454
Alignm identity: 288
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 39

Conread position: 72-435
Cow position:
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 24

Conread position: 75-392
Cow position:
Alignm length: 333
Alignm identity: 226
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 43, 32

Conread position: 75-501
Cow position:
Alignm length: 436
Alignm identity: 291
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 179, 87

Conread position: 78-499
Cow position:
Alignm length: 430
Alignm identity: 281
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 39, 19

Conread position: 81-427
Cow position:
Alignm length: 359
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 29

Conread position: 81-453
Cow position:
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 29

Conread position: 81-492
Cow position:
Alignm length: 435
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 7

Conread position: 82-501
Cow position:
Alignm length: 438
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 88

Conread position: 86-501
Cow position:
Alignm length: 423
Alignm identity: 283
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 80, 153

Conread position: 89-496
Cow position:
Alignm length: 414
Alignm identity: 281
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 29, 21

Conread position: 90-503
Cow position:
Alignm length: 425
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 20

Conread position: 97-436
Cow position:
Alignm length: 353
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 13

Conread position: 97-502
Cow position:
Alignm length: 435
Alignm identity: 273
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 121, 0

Conread position: 115-386
Cow position:
Alignm length: 278
Alignm identity: 192
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 105, 55

Conread position: 115-402
Cow position:
Alignm length: 301
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 87

Conread position: 117-501
Cow position:
Alignm length: 403
Alignm identity: 268
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 125, 60

Conread position: 118-447
Cow position:
Alignm length: 341
Alignm identity: 232
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 93, 44

Conread position: 122-501
Cow position:
Alignm length: 396
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 241

Conread position: 127-408
Cow position:
Alignm length: 288
Alignm identity: 189
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 89, 170

Conread position: 127-498
Cow position:
Alignm length: 387
Alignm identity: 262
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 62, 51

Conread position: 136-435
Cow position:
Alignm length: 311
Alignm identity: 203
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 117, 36

Conread position: 137-501
Cow position:
Alignm length: 395
Alignm identity: 259
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 221

Conread position: 139-501
Cow position:
Alignm length: 383
Alignm identity: 243
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 270

Conread position: 145-502
Cow position:
Alignm length: 392
Alignm identity: 268
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 102, 29

Conread position: 152-446
Cow position:
Alignm length: 305
Alignm identity: 200
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 64, 267

Conread position: 157-436
Cow position:
Alignm length: 293
Alignm identity: 198
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 109, 7

Conread position: 160-435
Cow position:
Alignm length: 294
Alignm identity: 203
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 94, 0

Conread position: 160-501
Cow position:
Alignm length: 345
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 83, 140

Conread position: 161-469
Cow position:
Alignm length: 320
Alignm identity: 228
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 131, 82

Conread position: 161-501
Cow position:
Alignm length: 351
Alignm identity: 230
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 92, 25

Conread position: 166-439
Cow position:
Alignm length: 283
Alignm identity: 197
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 124, 77

Conread position: 171-386
Cow position:
Alignm length: 220
Alignm identity: 154
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 94

Conread position: 174-501
Cow position:
Alignm length: 343
Alignm identity: 240
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 74, 63

Conread position: 179-458
Cow position:
Alignm length: 293
Alignm identity: 198
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 75, 241

Conread position: 179-492
Cow position:
Alignm length: 329
Alignm identity: 229
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 110, 64

Conread position: 206-492
Cow position:
Alignm length: 311
Alignm identity: 211
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 78

Conread position: 206-501
Cow position:
Alignm length: 316
Alignm identity: 214
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 48, 76

Conread position: 208-472
Cow position:
Alignm length: 281
Alignm identity: 188
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 71

Conread position: 215-501
Cow position:
Alignm length: 299
Alignm identity: 202
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 140

Conread position: 225-499
Cow position:
Alignm length: 285
Alignm identity: 184
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 240-477
Cow position:
Alignm length: 252
Alignm identity: 176
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 9

Conread position: 251-501
Cow position:
Alignm length: 259
Alignm identity: 175
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 186, 41

Conread position: 257-499
Cow position:
Alignm length: 253
Alignm identity: 174
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 35, 144

Conread position: 264-439
Cow position:
Alignm length: 179
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 264-501
Cow position:
Alignm length: 241
Alignm identity: 167
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 68

Conread position: 266-500
Cow position:
Alignm length: 249
Alignm identity: 177
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 25, 91

Conread position: 273-489
Cow position:
Alignm length: 221
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 122

Conread position: 281-530
Cow position:
Alignm length: 260
Alignm identity: 171
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 120, 113

Conread position: 289-501
Cow position:
Alignm length: 215
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 124, 141

Conread position: 291-501
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 7

Conread position: 298-501
Cow position:
Alignm length: 210
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 139, 189

Show alignments to all cow chromosomes.