Cow genome map


           Conread name:
           rspc030_i12.y1
        

               Conread position:
               2-501
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 22
               

               Conread position:
               5-380
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               270
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               113, 49
               

               Conread position:
               5-392
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               36, 111
               

               Conread position:
               5-407
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               41, 102
               

               Conread position:
               5-408
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               286
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               36, 180
               

               Conread position:
               5-446
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 109
               

               Conread position:
               5-453
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 109
               

               Conread position:
               5-465
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 66
               

               Conread position:
               5-488
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 63
               

               Conread position:
               5-495
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               331
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               36, 142
               

               Conread position:
               5-499
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 20
               

               Conread position:
               5-499
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 110
               

               Conread position:
               5-500
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 50
               

               Conread position:
               5-500
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 96
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               321
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               49, 72
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 111
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 109
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 106
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 30
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 168
               

               Conread position:
               6-386
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 109
               

               Conread position:
               6-418
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 60
               

               Conread position:
               6-437
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               306
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               42, 107
               

               Conread position:
               7-446
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 94
               

               Conread position:
               8-476
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 106
               

               Conread position:
               10-438
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 81
               

               Conread position:
               13-501
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 41
               

               Conread position:
               17-501
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 7
               

               Conread position:
               30-542
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 67
               

               Conread position:
               32-392
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               253
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               22, 81
               

               Conread position:
               40-480
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 24
               

               Conread position:
               45-501
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 52
               

               Conread position:
               51-500
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               301
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               12, 35
               

               Conread position:
               54-480
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               290
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               18, 63
               

               Conread position:
               59-446
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 48
               

               Conread position:
               64-501
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 33
               

               Conread position:
               65-502
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 45
               

               Conread position:
               71-492
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               304
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               47, 16
               

               Conread position:
               73-295
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               44, 37
               

               Conread position:
               73-437
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               256
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               170, 332
               

               Conread position:
               75-495
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 36
               

               Conread position:
               78-501
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 32
               

               Conread position:
               79-435
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 18
               

               Conread position:
               89-447
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               29, 21
               

               Conread position:
               89-501
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 21
               

               Conread position:
               111-420
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               124, 40
               

               Conread position:
               119-438
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               134, 42
               

               Conread position:
               129-501
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               270
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               17, 116
               

               Conread position:
               136-446
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               81, 49
               

               Conread position:
               136-541
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 397
               

               Conread position:
               137-501
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               116, 20
               

               Conread position:
               147-501
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               258
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               107, 259
               

               Conread position:
               160-501
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 24
               

               Conread position:
               161-501
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 129
               

               Conread position:
               164-536
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               271
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               32, 81
               

               Conread position:
               168-541
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 15
               

               Conread position:
               185-498
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               108, 7
               

               Conread position:
               188-427
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               54, 62
               

               Conread position:
               188-501
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               102, 63
               

               Conread position:
               192-501
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               62, 43
               

               Conread position:
               196-404
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               199-501
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               86, 35
               

               Conread position:
               206-435
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               59, 49
               

               Conread position:
               206-501
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               92, 170
               

               Conread position:
               213-501
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               76, 18
               

               Conread position:
               240-495
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               52, 9
               

               Conread position:
               240-501
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               52, 9
               

               Conread position:
               240-501
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               49, 15
               

               Conread position:
               245-501
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               45, 107
               

               Conread position:
               261-543
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               161, 29
               

               Conread position:
               277-501
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               12, 124
               

               Conread position:
               285-498
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               6, 14
               

               Conread position:
               288-500
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               110, 106
               
Show alignments to all cow chromosomes.