Cow genome map


           Conread name:
           rspc030_i12.y1
        

               Conread position:
               2-439
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 47
               

               Conread position:
               4-501
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 95
               

               Conread position:
               5-350
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 108
               

               Conread position:
               5-359
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               277
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               68, 49
               

               Conread position:
               5-406
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               288
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               36, 97
               

               Conread position:
               5-407
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 177
               

               Conread position:
               5-427
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 107
               

               Conread position:
               5-439
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 109
               

               Conread position:
               5-445
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 20
               

               Conread position:
               5-446
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 94
               

               Conread position:
               5-446
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 109
               

               Conread position:
               5-446
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 109
               

               Conread position:
               5-446
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 110
               

               Conread position:
               5-450
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               316
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               36, 83
               

               Conread position:
               5-487
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 156
               

               Conread position:
               5-492
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 49
               

               Conread position:
               5-495
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               331
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               49, 93
               

               Conread position:
               5-498
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 109
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 109
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 49
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 74
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 34
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               343
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               43, 109
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 19
               

               Conread position:
               5-501
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 96
               

               Conread position:
               6-435
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               295
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               25, 62
               

               Conread position:
               6-446
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 181
               

               Conread position:
               6-500
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 160
               

               Conread position:
               7-501
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 82
               

               Conread position:
               8-501
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 97
               

               Conread position:
               15-501
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 159
               

               Conread position:
               40-435
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 62
               

               Conread position:
               40-501
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               312
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               136, 43
               

               Conread position:
               48-440
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 64
               

               Conread position:
               58-501
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 236
               

               Conread position:
               61-495
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 16
               

               Conread position:
               61-542
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               330
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               59, 23
               

               Conread position:
               64-431
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               240
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               54, 46
               

               Conread position:
               64-501
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 45
               

               Conread position:
               64-501
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 46
               

               Conread position:
               65-446
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               263
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               52, 45
               

               Conread position:
               69-435
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 41
               

               Conread position:
               70-492
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 40
               

               Conread position:
               71-436
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               46, 39
               

               Conread position:
               71-500
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 28
               

               Conread position:
               71-500
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 178
               

               Conread position:
               71-501
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 26
               

               Conread position:
               73-427
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               45, 5
               

               Conread position:
               74-377
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 36
               

               Conread position:
               75-501
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 95
               

               Conread position:
               79-501
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               279
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               176, 18
               

               Conread position:
               81-402
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               206, 16
               

               Conread position:
               81-501
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               295
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               37, 18
               

               Conread position:
               81-501
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 29
               

               Conread position:
               87-501
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 120
               

               Conread position:
               90-501
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 20
               

               Conread position:
               94-501
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               280
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               249, 16
               

               Conread position:
               98-506
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 12
               

               Conread position:
               99-499
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 406
               

               Conread position:
               115-407
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               47, 69
               

               Conread position:
               115-437
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               40, 81
               

               Conread position:
               117-501
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 103
               

               Conread position:
               136-501
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               152, 129
               

               Conread position:
               136-501
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               258
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               202, 36
               

               Conread position:
               136-501
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 55
               

               Conread position:
               137-501
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               84, 118
               

               Conread position:
               140-501
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               251
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               16, 216
               

               Conread position:
               151-499
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               262
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               103, 120
               

               Conread position:
               153-501
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 85
               

               Conread position:
               161-396
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               85, 241
               

               Conread position:
               161-498
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               93, 39
               

               Conread position:
               161-538
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               268
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               126, 91
               

               Conread position:
               164-407
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               174-495
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               42, 192
               

               Conread position:
               174-508
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               241
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               116, 245
               

               Conread position:
               175-501
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               29, 185
               

               Conread position:
               185-436
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               68, 222
               

               Conread position:
               189-543
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               54, 14
               

               Conread position:
               191-501
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               43, 208
               

               Conread position:
               203-507
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               223
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               62, 41
               

               Conread position:
               210-501
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               33, 75
               

               Conread position:
               214-501
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               214-501
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               29, 154
               

               Conread position:
               224-500
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               66, 31
               

               Conread position:
               230-509
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               60, 25
               

               Conread position:
               239-541
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               14, 64
               

               Conread position:
               240-435
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               52, 17
               

               Conread position:
               240-501
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               52, 9
               

               Conread position:
               240-501
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               12, 59
               

               Conread position:
               259-501
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 197
               

               Conread position:
               261-491
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 141
               

               Conread position:
               267-501
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               20, 138
               

               Conread position:
               278-501
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               66, 72
               

               Conread position:
               286-534
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               286-535
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               58, 64
               

               Conread position:
               287-499
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               290-501
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               292-501
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               132, 117
               

               Conread position:
               298-500
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               299-502
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               45, 51
               

               Conread position:
               317-491
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               114, 0
               
Show alignments to all cow chromosomes.