Cow genome map
| Conread name: | rspc031_h17.y1 |
| Conread position: | 1-384 |
| Cow position: | chr1:72656371-72656745 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 1-384 |
| Cow position: | chr1:102435643-102435266 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 6 |
| Conread position: | 2-170 |
| Cow position: | chr1:28722204-28722376 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 16, 9 |
| Conread position: | 2-174 |
| Cow position: | chr1:59672474-59672648 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 2-211 |
| Cow position: | chr1:52323284-52323494 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 2-218 |
| Cow position: | chr1:45096987-45097207 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 2-245 |
| Cow position: | chr1:18406787-18406554 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 17, 10 |
| Conread position: | 2-299 |
| Cow position: | chr1:42289811-42290097 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 9, 16 |
| Conread position: | 2-317 |
| Cow position: | chr1:89740857-89740534 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 232 |
| Conread position: | 2-375 |
| Cow position: | chr1:57367750-57367379 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 123 |
| Conread position: | 2-381 |
| Cow position: | chr1:101858577-101858221 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 10 |
| Conread position: | 2-383 |
| Cow position: | chr1:40514109-40513728 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 37 |
| Conread position: | 2-383 |
| Cow position: | chr1:88634781-88635139 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 10 |
| Conread position: | 2-384 |
| Cow position: | chr1:28802022-28801664 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 10 |
| Conread position: | 3-271 |
| Cow position: | chr1:99909939-99910206 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 17, 123 |
| Conread position: | 3-373 |
| Cow position: | chr1:67285888-67286253 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 123 |
| Conread position: | 3-375 |
| Cow position: | chr1:3934764-3934400 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 125 |
| Conread position: | 3-378 |
| Cow position: | chr1:58223658-58224058 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 18, 307 |
| Conread position: | 3-378 |
| Cow position: | chr1:82651996-82652400 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 18, 123 |
| Conread position: | 3-379 |
| Cow position: | chr1:37455097-37455470 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 117 |
| Conread position: | 3-379 |
| Cow position: | chr1:62806425-62806044 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 127 |
| Conread position: | 3-380 |
| Cow position: | chr1:40685338-40684927 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 316 |
| Conread position: | 3-380 |
| Cow position: | chr1:85791049-85791455 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 282 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 18, 123 |
| Conread position: | 3-383 |
| Cow position: | chr1:57655908-57656320 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 17, 314 |
| Conread position: | 3-383 |
| Cow position: | chr1:58335216-58335598 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 273 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 16, 125 |
| Conread position: | 3-383 |
| Cow position: | chr1:73071646-73071256 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 187 |
| Conread position: | 3-384 |
| Cow position: | chr1:11863896-11863504 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 123 |
| Conread position: | 3-384 |
| Cow position: | chr1:22000571-22000195 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 124 |
| Conread position: | 3-384 |
| Cow position: | chr1:43019478-43019887 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 123 |
| Conread position: | 3-384 |
| Cow position: | chr1:59210785-59210372 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 279 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 18, 315 |
| Conread position: | 3-384 |
| Cow position: | chr1:82563864-82564267 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 18, 123 |
| Conread position: | 3-384 |
| Cow position: | chr1:88130140-88130520 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 127 |
| Conread position: | 3-384 |
| Cow position: | chr1:93853899-93854282 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 127 |
| Conread position: | 5-380 |
| Cow position: | chr1:30057942-30058304 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 148, 19 |
| Conread position: | 5-384 |
| Cow position: | chr1:33711451-33711823 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 240 |
| Conread position: | 5-384 |
| Cow position: | chr1:72187492-72187109 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 125 |
| Conread position: | 6-340 |
| Cow position: | chr1:40907508-40907845 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 6-384 |
| Cow position: | chr1:33550308-33550685 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 146 |
| Conread position: | 11-375 |
| Cow position: | chr1:79637554-79637178 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 118 |
| Conread position: | 11-384 |
| Cow position: | chr1:55324134-55323757 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 77 |
| Conread position: | 12-368 |
| Cow position: | chr1:42176974-42176638 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 30, 7 |
| Conread position: | 16-381 |
| Cow position: | chr1:8824464-8824821 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 9 |
| Conread position: | 17-196 |
| Cow position: | chr1:38414237-38414418 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 27, 101 |
| Conread position: | 17-245 |
| Cow position: | chr1:62854413-62854183 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 27, 109 |
| Conread position: | 17-384 |
| Cow position: | chr1:18244987-18244627 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 72 |
| Conread position: | 17-384 |
| Cow position: | chr1:63500856-63501223 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 23, 81 |
| Conread position: | 17-384 |
| Cow position: | chr1:82919243-82918889 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 101 |
| Conread position: | 17-384 |
| Cow position: | chr1:87244206-87244561 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 67 |
| Conread position: | 17-384 |
| Cow position: | chr1:101149254-101149605 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 38 |
| Conread position: | 19-195 |
| Cow position: | chr1:89478593-89478770 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 19-319 |
| Cow position: | chr1:76703948-76703650 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 23, 99 |
| Conread position: | 19-381 |
| Cow position: | chr1:72134835-72135200 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 100 |
| Conread position: | 19-384 |
| Cow position: | chr1:52233677-52233337 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 259 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 25, 99 |
| Conread position: | 21-239 |
| Cow position: | chr1:53364101-53364322 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 62 |
| Conread position: | 24-378 |
| Cow position: | chr1:25887722-25887380 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 18, 92 |
| Conread position: | 25-384 |
| Cow position: | chr1:89900275-89899939 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 93 |
| Conread position: | 25-384 |
| Cow position: | chr1:97123259-97123595 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 93 |
| Conread position: | 27-313 |
| Cow position: | chr1:91893591-91893312 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 15, 78 |
| Conread position: | 27-374 |
| Cow position: | chr1:72980689-72981026 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 27-381 |
| Cow position: | chr1:42735864-42736216 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 27-381 |
| Cow position: | chr1:49974780-49974429 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 27-381 |
| Cow position: | chr1:79336387-79336045 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 253 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 27-383 |
| Cow position: | chr1:56194524-56194169 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 99 |
| Conread position: | 27-383 |
| Cow position: | chr1:85781367-85781019 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 259 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 15, 98 |
| Conread position: | 27-384 |
| Cow position: | chr1:13254021-13253669 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 26 |
| Conread position: | 27-384 |
| Cow position: | chr1:25180624-25180269 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 27-384 |
| Cow position: | chr1:25549471-25549825 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 98 |
| Conread position: | 27-384 |
| Cow position: | chr1:55775565-55775916 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 27-384 |
| Cow position: | chr1:63606376-63606021 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 98 |
| Conread position: | 27-384 |
| Cow position: | chr1:69402400-69402754 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 78 |
| Conread position: | 27-384 |
| Cow position: | chr1:69923057-69922701 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 79 |
| Conread position: | 27-384 |
| Cow position: | chr1:72079889-72080240 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 27-384 |
| Cow position: | chr1:76546131-76545778 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 98 |
| Conread position: | 27-384 |
| Cow position: | chr1:76623537-76623183 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 98 |
| Conread position: | 27-384 |
| Cow position: | chr1:79457560-79457205 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 99 |
| Conread position: | 27-384 |
| Cow position: | chr1:85881158-85881513 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 27-384 |
| Cow position: | chr1:86699813-86699456 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 99 |
| Conread position: | 27-384 |
| Cow position: | chr1:94659284-94659639 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 38-283 |
| Cow position: | chr1:23050064-23050302 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 109, 79 |
| Conread position: | 38-378 |
| Cow position: | chr1:61732481-61732817 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 112, 43 |
| Conread position: | 38-379 |
| Cow position: | chr1:34688778-34689109 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 112, 56 |
| Conread position: | 38-384 |
| Cow position: | chr1:5501398-5501737 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 85 |
| Conread position: | 41-379 |
| Cow position: | chr1:82346603-82346278 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 301, 75 |
| Conread position: | 50-382 |
| Cow position: | chr1:17942393-17942052 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 57 |
| Conread position: | 50-384 |
| Cow position: | chr1:62245218-62244888 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 73 |
| Conread position: | 50-384 |
| Cow position: | chr1:76753217-76752888 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 73 |
| Conread position: | 50-384 |
| Cow position: | chr1:100597949-100597620 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 37 |
| Conread position: | 51-384 |
| Cow position: | chr1:13645176-13645484 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 291, 72 |
| Conread position: | 56-384 |
| Cow position: | chr1:57567386-57567712 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 16, 69 |
| Conread position: | 58-382 |
| Cow position: | chr1:1461883-1461568 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 51 |
| Conread position: | 60-384 |
| Cow position: | chr1:37420530-37420209 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 7 |
| Conread position: | 64-384 |
| Cow position: | chr1:3386560-3386244 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 59 |
| Conread position: | 64-384 |
| Cow position: | chr1:40953182-40953473 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 68-383 |
| Cow position: | chr1:102548667-102548967 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 174, 19 |
| Conread position: | 72-377 |
| Cow position: | chr1:79108570-79108862 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 78, 19 |
| Conread position: | 93-384 |
| Cow position: | chr1:97227233-97226938 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 56, 30 |
| Conread position: | 96-383 |
| Cow position: | chr1:67902959-67902655 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 54, 27 |
| Conread position: | 97-384 |
| Cow position: | chr1:28872556-28872839 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 217 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 143, 26 |
| Conread position: | 116-384 |
| Cow position: | chr1:59933023-59933307 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 26 |
| Conread position: | 118-378 |
| Cow position: | chr1:61308502-61308765 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 118, 29 |
| Conread position: | 118-383 |
| Cow position: | chr1:31366595-31366316 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 36, 180 |
| Conread position: | 118-383 |
| Cow position: | chr1:53198283-53198552 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 112, 29 |
| Conread position: | 119-384 |
| Cow position: | chr1:30023698-30023429 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 112, 23 |
| Conread position: | 134-382 |
| Cow position: | chr1:69536408-69536663 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 17, 6 |
| Conread position: | 135-383 |
| Cow position: | chr1:102555609-102555853 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 42 |
| Conread position: | 153-379 |
| Cow position: | chr1:30027995-30027775 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 81, 37 |
| Conread position: | 154-384 |
| Cow position: | chr1:8553852-8554090 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 135 |
| Conread position: | 154-384 |
| Cow position: | chr1:79921203-79920965 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 135 |
| Conread position: | 154-384 |
| Cow position: | chr1:99995569-99995334 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 12, 130 |
| Conread position: | 158-378 |
| Cow position: | chr1:67835596-67835375 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 11, 22 |
| Conread position: | 159-378 |
| Cow position: | chr1:21086941-21087164 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 69, 131 |
| Conread position: | 161-331 |
| Cow position: | chr1:33850793-33850965 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 129 |
| Conread position: | 161-376 |
| Cow position: | chr1:86548589-86548368 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 70, 134 |
| Conread position: | 161-378 |
| Cow position: | chr1:17037018-17036795 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 72, 126 |
| Conread position: | 161-378 |
| Cow position: | chr1:30284059-30283840 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 70, 42 |
| Conread position: | 161-378 |
| Cow position: | chr1:55276946-55276723 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 67, 130 |
| Conread position: | 161-378 |
| Cow position: | chr1:56489380-56489602 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 70, 130 |
| Conread position: | 161-378 |
| Cow position: | chr1:71563034-71562812 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 72, 130 |
| Conread position: | 161-378 |
| Cow position: | chr1:91898542-91898763 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 70, 128 |
| Conread position: | 161-381 |
| Cow position: | chr1:40052892-40053118 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 70, 130 |
| Conread position: | 161-382 |
| Cow position: | chr1:8027609-8027382 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 70, 130 |
| Conread position: | 161-382 |
| Cow position: | chr1:56162864-56163089 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 70, 131 |
| Conread position: | 161-384 |
| Cow position: | chr1:11292571-11292342 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 70, 130 |
| Conread position: | 161-384 |
| Cow position: | chr1:39543304-39543533 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 70, 131 |
| Conread position: | 161-384 |
| Cow position: | chr1:52172938-52172709 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 77, 130 |
| Conread position: | 161-384 |
| Cow position: | chr1:56722665-56722894 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 70, 130 |
| Conread position: | 161-384 |
| Cow position: | chr1:80359632-80359404 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 70, 130 |
| Conread position: | 161-384 |
| Cow position: | chr1:87449486-87449715 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 77, 130 |
| Conread position: | 161-384 |
| Cow position: | chr1:89425124-89425352 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 70, 17 |
| Conread position: | 161-384 |
| Cow position: | chr1:91719105-91718875 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 60, 131 |
| Conread position: | 165-342 |
| Cow position: | chr1:9382707-9382525 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 118 |
| Conread position: | 169-384 |
| Cow position: | chr1:13449732-13449953 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 61, 122 |
| Conread position: | 169-384 |
| Cow position: | chr1:88759107-88759329 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 64, 123 |
| Conread position: | 215-384 |
| Cow position: | chr1:68607961-68607786 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 20, 76 |
| Conread position: | 229-384 |
| Cow position: | chr1:89771071-89770920 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 9, 43 |
| Conread position: | 247-384 |
| Cow position: | chr1:28722417-28722554 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 95, 38 |
| Conread position: | 252-384 |
| Cow position: | chr1:89809996-89809864 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 90, 33 |
| Conread position: | 258-384 |
| Cow position: | chr1:38414448-38414570 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 84, 26 |
Show alignments to all cow chromosomes.