Cow genome map


           Conread name:
           rspc031_h17.y1
        

               Conread position:
               1-368
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               41, 18
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               3-176
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               17, 117
               

               Conread position:
               3-245
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               16, 49
               

               Conread position:
               3-372
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 179
               

               Conread position:
               3-372
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               16, 63
               

               Conread position:
               3-374
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 115
               

               Conread position:
               3-375
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 126
               

               Conread position:
               3-380
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               18, 313
               

               Conread position:
               3-382
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               281
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               18, 315
               

               Conread position:
               3-383
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               18, 49
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 126
               

               Conread position:
               4-384
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               21, 312
               

               Conread position:
               5-384
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 115
               

               Conread position:
               6-377
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               242
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               10, 14
               

               Conread position:
               7-267
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 80
               

               Conread position:
               10-378
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               8, 109
               

               Conread position:
               11-287
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 220
               

               Conread position:
               17-176
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               31, 101
               

               Conread position:
               17-382
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 70
               

               Conread position:
               17-382
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               27, 78
               

               Conread position:
               17-384
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 102
               

               Conread position:
               17-384
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 102
               

               Conread position:
               19-377
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               22, 36
               

               Conread position:
               19-380
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 108
               

               Conread position:
               19-381
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               266
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               11, 66
               

               Conread position:
               20-384
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 105
               

               Conread position:
               24-374
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               16, 63
               

               Conread position:
               24-384
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 101
               

               Conread position:
               25-384
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               245
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               60, 68
               

               Conread position:
               27-224
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-342
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               236
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               23, 67
               

               Conread position:
               27-381
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 91
               

               Conread position:
               27-383
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 78
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 99
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               28-237
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               16, 47
               

               Conread position:
               38-383
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               36, 58
               

               Conread position:
               45-384
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               192, 46
               

               Conread position:
               49-384
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               248
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               97, 67
               

               Conread position:
               50-381
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 73
               

               Conread position:
               50-382
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               245
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               190, 41
               

               Conread position:
               50-382
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               101, 35
               

               Conread position:
               50-384
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 73
               

               Conread position:
               50-384
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 53
               

               Conread position:
               54-384
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 69
               

               Conread position:
               60-384
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 62
               

               Conread position:
               103-372
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               19, 141
               

               Conread position:
               117-378
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 22
               

               Conread position:
               154-370
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               9, 142
               

               Conread position:
               154-384
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               9, 139
               

               Conread position:
               158-378
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               12, 129
               

               Conread position:
               161-375
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               70, 118
               

               Conread position:
               161-377
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               70, 132
               

               Conread position:
               161-380
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               69, 131
               

               Conread position:
               161-381
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               79, 19
               

               Conread position:
               161-382
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               70, 130
               

               Conread position:
               161-382
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               70, 94
               

               Conread position:
               161-383
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               62, 126
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               70, 126
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 131
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               69, 119
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               76, 130
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               70, 130
               

               Conread position:
               169-320
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               62, 122
               

               Conread position:
               169-384
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               62, 122
               

               Conread position:
               215-380
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               25, 77
               

               Conread position:
               226-384
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               20, 13
               
Show alignments to all cow chromosomes.