Cow genome map
| Conread name: | rspc031_h17.y1 |
| Conread position: | 1-368 |
| Cow position: | chr10:4499115-4499486 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 2-384 |
| Cow position: | chr10:34685315-34685682 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 7 |
| Conread position: | 3-176 |
| Cow position: | chr10:39780445-39780265 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 17, 117 |
| Conread position: | 3-245 |
| Cow position: | chr10:29633421-29633179 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 16, 49 |
| Conread position: | 3-372 |
| Cow position: | chr10:38546822-38546449 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 179 |
| Conread position: | 3-372 |
| Cow position: | chr10:42735924-42736281 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 16, 63 |
| Conread position: | 3-374 |
| Cow position: | chr10:31523270-31523626 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 115 |
| Conread position: | 3-375 |
| Cow position: | chr10:32650144-32650518 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 126 |
| Conread position: | 3-380 |
| Cow position: | chr10:21401292-21400885 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 18, 313 |
| Conread position: | 3-382 |
| Cow position: | chr10:4192840-4192429 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 18, 315 |
| Conread position: | 3-383 |
| Cow position: | chr10:14803217-14803617 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 18, 49 |
| Conread position: | 3-384 |
| Cow position: | chr10:37769229-37769608 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 126 |
| Conread position: | 4-384 |
| Cow position: | chr10:281245-280834 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 21, 312 |
| Conread position: | 5-384 |
| Cow position: | chr10:54126871-54127248 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 115 |
| Conread position: | 6-377 |
| Cow position: | chr10:20536853-20537204 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 10, 14 |
| Conread position: | 7-267 |
| Cow position: | chr10:61296707-61296975 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 80 |
| Conread position: | 10-378 |
| Cow position: | chr10:42747521-42747881 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 8, 109 |
| Conread position: | 11-287 |
| Cow position: | chr10:42627878-42628158 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 220 |
| Conread position: | 17-176 |
| Cow position: | chr10:40425114-40425276 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 31, 101 |
| Conread position: | 17-382 |
| Cow position: | chr10:14951149-14951501 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 70 |
| Conread position: | 17-382 |
| Cow position: | chr10:62777777-62778126 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 267 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 27, 78 |
| Conread position: | 17-384 |
| Cow position: | chr10:25497785-25498141 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 102 |
| Conread position: | 17-384 |
| Cow position: | chr10:62216036-62216393 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 102 |
| Conread position: | 19-377 |
| Cow position: | chr10:29695670-29696028 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 22, 36 |
| Conread position: | 19-380 |
| Cow position: | chr10:60489082-60489452 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 108 |
| Conread position: | 19-381 |
| Cow position: | chr10:24299428-24299064 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 266 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 11, 66 |
| Conread position: | 20-384 |
| Cow position: | chr10:38539066-38538704 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 105 |
| Conread position: | 24-374 |
| Cow position: | chr10:34318822-34318486 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 16, 63 |
| Conread position: | 24-384 |
| Cow position: | chr10:21486347-21486702 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 101 |
| Conread position: | 25-384 |
| Cow position: | chr10:21382145-21382504 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 245 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 60, 68 |
| Conread position: | 27-224 |
| Cow position: | chr10:2123965-2123776 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 27-342 |
| Cow position: | chr10:37040521-37040830 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 236 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 23, 67 |
| Conread position: | 27-381 |
| Cow position: | chr10:7283248-7282900 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 91 |
| Conread position: | 27-383 |
| Cow position: | chr10:19143908-19143553 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 27-384 |
| Cow position: | chr10:1374971-1375322 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 27-384 |
| Cow position: | chr10:10581087-10581459 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 27-384 |
| Cow position: | chr10:22100674-22101027 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 78 |
| Conread position: | 27-384 |
| Cow position: | chr10:29847186-29846824 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 27-384 |
| Cow position: | chr10:37060361-37060716 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 99 |
| Conread position: | 27-384 |
| Cow position: | chr10:38345942-38345577 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 28-237 |
| Cow position: | chr10:41144881-41144680 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 16, 47 |
| Conread position: | 38-383 |
| Cow position: | chr10:2422330-2421985 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 36, 58 |
| Conread position: | 45-384 |
| Cow position: | chr10:182996-183330 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 192, 46 |
| Conread position: | 49-384 |
| Cow position: | chr10:276070-276379 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 248 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 97, 67 |
| Conread position: | 50-381 |
| Cow position: | chr10:8289425-8289753 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 73 |
| Conread position: | 50-382 |
| Cow position: | chr10:123783-124102 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 245 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 190, 41 |
| Conread position: | 50-382 |
| Cow position: | chr10:14859445-14859768 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 101, 35 |
| Conread position: | 50-384 |
| Cow position: | chr10:19511070-19511393 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 73 |
| Conread position: | 50-384 |
| Cow position: | chr10:62409395-62409066 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 53 |
| Conread position: | 54-384 |
| Cow position: | chr10:39041845-39041519 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 69 |
| Conread position: | 60-384 |
| Cow position: | chr10:57990496-57990178 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 62 |
| Conread position: | 103-372 |
| Cow position: | chr10:1938327-1938067 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 19, 141 |
| Conread position: | 117-378 |
| Cow position: | chr10:25565720-25565459 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 22 |
| Conread position: | 154-370 |
| Cow position: | chr10:32577849-32578075 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 9, 142 |
| Conread position: | 154-384 |
| Cow position: | chr10:51953054-51952816 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 9, 139 |
| Conread position: | 158-378 |
| Cow position: | chr10:39817791-39817563 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 12, 129 |
| Conread position: | 161-375 |
| Cow position: | chr10:39179350-39179570 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 70, 118 |
| Conread position: | 161-377 |
| Cow position: | chr10:19497356-19497134 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 70, 132 |
| Conread position: | 161-380 |
| Cow position: | chr10:41157013-41157238 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 69, 131 |
| Conread position: | 161-381 |
| Cow position: | chr10:19715486-19715263 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 79, 19 |
| Conread position: | 161-382 |
| Cow position: | chr10:41876480-41876701 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 130 |
| Conread position: | 161-382 |
| Cow position: | chr10:55092671-55092893 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 70, 94 |
| Conread position: | 161-383 |
| Cow position: | chr10:11686098-11685877 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 62, 126 |
| Conread position: | 161-384 |
| Cow position: | chr10:21466812-21467041 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 70, 126 |
| Conread position: | 161-384 |
| Cow position: | chr10:21741192-21740963 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 131 |
| Conread position: | 161-384 |
| Cow position: | chr10:28641046-28641276 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 69, 119 |
| Conread position: | 161-384 |
| Cow position: | chr10:41566669-41566894 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 76, 130 |
| Conread position: | 161-384 |
| Cow position: | chr10:47906339-47906566 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 70, 130 |
| Conread position: | 169-320 |
| Cow position: | chr10:32654331-32654487 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 62, 122 |
| Conread position: | 169-384 |
| Cow position: | chr10:57559982-57559761 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 62, 122 |
| Conread position: | 215-380 |
| Cow position: | chr10:2123500-2123329 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 25, 77 |
| Conread position: | 226-384 |
| Cow position: | chr10:25359029-25359185 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 20, 13 |
Show alignments to all cow chromosomes.