Cow genome map


           Conread name:
           rspc031_h17.y1
        

               Conread position:
               1-368
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               253
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               41, 23
               

               Conread position:
               2-245
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               2-286
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 17
               

               Conread position:
               2-378
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 117
               

               Conread position:
               2-383
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 74
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               275
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 301
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 308
               

               Conread position:
               3-242
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               17, 124
               

               Conread position:
               3-342
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               258
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               18, 124
               

               Conread position:
               3-360
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               259
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               16, 36
               

               Conread position:
               3-365
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               270
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               16, 125
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 125
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               279
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               18, 320
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 125
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 126
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               17, 123
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 122
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 16
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               285
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               283
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               18, 313
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               274
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               16, 105
               

               Conread position:
               4-382
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 54
               

               Conread position:
               6-283
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               73, 25
               

               Conread position:
               7-381
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 57
               

               Conread position:
               11-237
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               14, 109
               

               Conread position:
               17-219
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               27, 101
               

               Conread position:
               17-220
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               27, 71
               

               Conread position:
               17-375
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 51
               

               Conread position:
               17-379
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 52
               

               Conread position:
               17-381
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 135
               

               Conread position:
               17-384
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 81
               

               Conread position:
               17-384
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 101
               

               Conread position:
               17-384
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 109
               

               Conread position:
               19-378
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 22
               

               Conread position:
               19-380
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 80
               

               Conread position:
               19-383
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               23, 43
               

               Conread position:
               21-271
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               14, 104
               

               Conread position:
               24-384
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 101
               

               Conread position:
               27-381
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-382
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 98
               

               Conread position:
               27-382
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-383
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 99
               

               Conread position:
               27-383
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 11
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 78
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 98
               

               Conread position:
               28-384
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               254
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               16, 90
               

               Conread position:
               35-384
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 90
               

               Conread position:
               38-382
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               112, 75
               

               Conread position:
               38-384
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 19
               

               Conread position:
               41-374
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 35
               

               Conread position:
               43-314
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 73
               

               Conread position:
               44-384
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               256
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               106, 40
               

               Conread position:
               50-330
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               191, 66
               

               Conread position:
               50-382
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 73
               

               Conread position:
               54-375
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 69
               

               Conread position:
               64-384
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               235
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               95-380
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 7
               

               Conread position:
               115-383
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               14, 123
               

               Conread position:
               154-384
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               9, 135
               

               Conread position:
               154-384
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 135
               

               Conread position:
               154-384
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               9, 135
               

               Conread position:
               154-384
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               9, 86
               

               Conread position:
               161-348
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               70, 118
               

               Conread position:
               161-369
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               70, 132
               

               Conread position:
               161-370
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               69, 130
               

               Conread position:
               161-376
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               72, 32
               

               Conread position:
               161-377
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               161-378
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               70, 128
               

               Conread position:
               161-382
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               70, 131
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               70, 25
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               77, 122
               

               Conread position:
               172-375
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               59, 115
               

               Conread position:
               184-381
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               158, 52
               

               Conread position:
               193-384
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               52, 14
               

               Conread position:
               219-384
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               123, 19
               

               Conread position:
               223-380
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               123, 16
               

               Conread position:
               229-381
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               113, 11
               

               Conread position:
               236-384
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               106, 50
               

               Conread position:
               257-383
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               5, 29
               

               Conread position:
               258-378
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               82, 26
               
Show alignments to all cow chromosomes.