Cow genome map
| Conread name: | rspc031_h17.y1 |
| Conread position: | 1-237 |
| Cow position: | chr12:32182874-32183108 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 18, 58 |
| Conread position: | 2-379 |
| Cow position: | chr12:22331955-22332323 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 2-383 |
| Cow position: | chr12:21197156-21197543 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 125 |
| Conread position: | 2-384 |
| Cow position: | chr12:22206407-22206034 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 14 |
| Conread position: | 2-384 |
| Cow position: | chr12:26947914-26947556 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 10 |
| Conread position: | 3-299 |
| Cow position: | chr12:22121054-22121351 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 123 |
| Conread position: | 3-381 |
| Cow position: | chr12:2281869-2282254 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 60 |
| Conread position: | 3-381 |
| Cow position: | chr12:43032073-43031671 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 18, 312 |
| Conread position: | 3-384 |
| Cow position: | chr12:6407314-6406936 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 126 |
| Conread position: | 3-384 |
| Cow position: | chr12:42860483-42860104 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 122 |
| Conread position: | 5-271 |
| Cow position: | chr12:48404106-48404371 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 20, 115 |
| Conread position: | 7-271 |
| Cow position: | chr12:21058639-21058370 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 10-161 |
| Cow position: | chr12:15954344-15954192 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 32, 7 |
| Conread position: | 10-379 |
| Cow position: | chr12:3630542-3630897 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 23, 7 |
| Conread position: | 17-315 |
| Cow position: | chr12:45260999-45261298 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 27, 76 |
| Conread position: | 18-174 |
| Cow position: | chr12:8310396-8310556 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 26, 100 |
| Conread position: | 23-220 |
| Cow position: | chr12:21940864-21941058 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 130, 21 |
| Conread position: | 27-287 |
| Cow position: | chr12:28766743-28766487 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 98 |
| Conread position: | 27-384 |
| Cow position: | chr12:11097598-11097952 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 66 |
| Conread position: | 27-384 |
| Cow position: | chr12:27933586-27933235 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 28-245 |
| Cow position: | chr12:21901337-21901546 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 16, 90 |
| Conread position: | 41-377 |
| Cow position: | chr12:1867843-1868169 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 109, 154 |
| Conread position: | 49-308 |
| Cow position: | chr12:2195-2453 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 98, 67 |
| Conread position: | 50-384 |
| Cow position: | chr12:252676-252347 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 73 |
| Conread position: | 50-384 |
| Cow position: | chr12:8678737-8678408 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 241 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 46, 53 |
| Conread position: | 53-384 |
| Cow position: | chr12:1401878-1402204 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 70 |
| Conread position: | 63-314 |
| Cow position: | chr12:9709085-9708819 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 238 |
| Conread position: | 63-381 |
| Cow position: | chr12:25101670-25101357 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 233 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 33, 49 |
| Conread position: | 118-378 |
| Cow position: | chr12:21426145-21426408 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 119-384 |
| Cow position: | chr12:21883465-21883738 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 112, 23 |
| Conread position: | 134-384 |
| Cow position: | chr12:21255193-21254945 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 97, 13 |
| Conread position: | 151-382 |
| Cow position: | chr12:15951773-15951544 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 89 |
| Conread position: | 154-308 |
| Cow position: | chr12:7425124-7425285 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 127 |
| Conread position: | 154-384 |
| Cow position: | chr12:26141286-26141524 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 9, 135 |
| Conread position: | 161-384 |
| Cow position: | chr12:3360395-3360621 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 72, 130 |
| Conread position: | 161-384 |
| Cow position: | chr12:21207179-21207405 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 64, 132 |
| Conread position: | 161-384 |
| Cow position: | chr12:32653029-32653258 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 70, 131 |
| Conread position: | 161-384 |
| Cow position: | chr12:37558041-37558270 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 70, 126 |
| Conread position: | 205-384 |
| Cow position: | chr12:21941311-21941490 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 6 |
| Conread position: | 252-384 |
| Cow position: | chr12:8310763-8310895 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 252-384 |
| Cow position: | chr12:21901532-21901667 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 89, 33 |
Show alignments to all cow chromosomes.