Cow genome map

Conread name: rspc031_h17.y1

Conread position: 1-379
Cow position:
Alignm length: 388
Alignm identity: 256
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 39

Conread position: 2-258
Cow position:
Alignm length: 264
Alignm identity: 178
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 10

Conread position: 2-300
Cow position:
Alignm length: 302
Alignm identity: 210
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 13, 117

Conread position: 2-376
Cow position:
Alignm length: 381
Alignm identity: 238
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 17, 117

Conread position: 2-381
Cow position:
Alignm length: 387
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 9

Conread position: 2-382
Cow position:
Alignm length: 399
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 126

Conread position: 2-384
Cow position:
Alignm length: 390
Alignm identity: 260
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 17, 61

Conread position: 2-384
Cow position:
Alignm length: 396
Alignm identity: 274
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 17, 127

Conread position: 2-384
Cow position:
Alignm length: 388
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 16

Conread position: 2-384
Cow position:
Alignm length: 390
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 10

Conread position: 2-384
Cow position:
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 26

Conread position: 3-148
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 116

Conread position: 3-180
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 117

Conread position: 3-229
Cow position:
Alignm length: 233
Alignm identity: 156
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 124

Conread position: 3-329
Cow position:
Alignm length: 338
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 14

Conread position: 3-331
Cow position:
Alignm length: 364
Alignm identity: 255
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 18, 100

Conread position: 3-381
Cow position:
Alignm length: 402
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 114

Conread position: 3-381
Cow position:
Alignm length: 390
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 83

Conread position: 3-383
Cow position:
Alignm length: 388
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 122

Conread position: 3-383
Cow position:
Alignm length: 404
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 124

Conread position: 3-384
Cow position:
Alignm length: 384
Alignm identity: 264
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 242, 15

Conread position: 3-384
Cow position:
Alignm length: 391
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 123

Conread position: 3-384
Cow position:
Alignm length: 393
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 74

Conread position: 3-384
Cow position:
Alignm length: 390
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 89

Conread position: 3-384
Cow position:
Alignm length: 388
Alignm identity: 269
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 16, 78

Conread position: 5-384
Cow position:
Alignm length: 414
Alignm identity: 281
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 15, 242

Conread position: 7-384
Cow position:
Alignm length: 385
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 70

Conread position: 7-384
Cow position:
Alignm length: 411
Alignm identity: 283
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 13, 310

Conread position: 8-378
Cow position:
Alignm length: 383
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 67

Conread position: 9-375
Cow position:
Alignm length: 372
Alignm identity: 241
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 111

Conread position: 10-382
Cow position:
Alignm length: 405
Alignm identity: 270
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 11, 308

Conread position: 10-383
Cow position:
Alignm length: 388
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 175

Conread position: 11-245
Cow position:
Alignm length: 238
Alignm identity: 174
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 14, 108

Conread position: 12-384
Cow position:
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 42

Conread position: 16-326
Cow position:
Alignm length: 320
Alignm identity: 217
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 58

Conread position: 16-380
Cow position:
Alignm length: 372
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 59

Conread position: 17-233
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 27, 101

Conread position: 17-235
Cow position:
Alignm length: 221
Alignm identity: 160
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 52

Conread position: 17-245
Cow position:
Alignm length: 233
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 101

Conread position: 17-245
Cow position:
Alignm length: 237
Alignm identity: 178
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 27, 96

Conread position: 17-256
Cow position:
Alignm length: 244
Alignm identity: 174
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 27, 101

Conread position: 17-293
Cow position:
Alignm length: 282
Alignm identity: 197
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 101

Conread position: 17-374
Cow position:
Alignm length: 359
Alignm identity: 234
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 75

Conread position: 17-374
Cow position:
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 58

Conread position: 17-375
Cow position:
Alignm length: 372
Alignm identity: 257
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 26, 51

Conread position: 17-383
Cow position:
Alignm length: 373
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 101

Conread position: 17-384
Cow position:
Alignm length: 388
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 109

Conread position: 17-384
Cow position:
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 48

Conread position: 17-384
Cow position:
Alignm length: 372
Alignm identity: 268
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 20, 102

Conread position: 17-384
Cow position:
Alignm length: 388
Alignm identity: 268
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 16, 64

Conread position: 17-384
Cow position:
Alignm length: 370
Alignm identity: 256
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 30, 94

Conread position: 19-375
Cow position:
Alignm length: 362
Alignm identity: 236
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 133, 22

Conread position: 19-382
Cow position:
Alignm length: 389
Alignm identity: 264
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 23, 99

Conread position: 20-360
Cow position:
Alignm length: 349
Alignm identity: 239
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 20, 106

Conread position: 20-384
Cow position:
Alignm length: 397
Alignm identity: 266
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 31, 63

Conread position: 20-384
Cow position:
Alignm length: 374
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 105

Conread position: 21-384
Cow position:
Alignm length: 369
Alignm identity: 253
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 29, 84

Conread position: 21-384
Cow position:
Alignm length: 371
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 102

Conread position: 22-148
Cow position:
Alignm length: 127
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 23-383
Cow position:
Alignm length: 371
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 84

Conread position: 24-375
Cow position:
Alignm length: 359
Alignm identity: 240
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 102

Conread position: 27-283
Cow position:
Alignm length: 265
Alignm identity: 189
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 23, 101

Conread position: 27-372
Cow position:
Alignm length: 355
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 99

Conread position: 27-377
Cow position:
Alignm length: 361
Alignm identity: 252
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 12, 88

Conread position: 27-381
Cow position:
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 98

Conread position: 27-381
Cow position:
Alignm length: 364
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 98

Conread position: 27-383
Cow position:
Alignm length: 367
Alignm identity: 258
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 23, 99

Conread position: 27-384
Cow position:
Alignm length: 368
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 78

Conread position: 27-384
Cow position:
Alignm length: 368
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 98

Conread position: 27-384
Cow position:
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 99

Conread position: 27-384
Cow position:
Alignm length: 367
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 65

Conread position: 27-384
Cow position:
Alignm length: 365
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 98

Conread position: 27-384
Cow position:
Alignm length: 365
Alignm identity: 251
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 24, 8

Conread position: 27-384
Cow position:
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 98

Conread position: 28-384
Cow position:
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 96

Conread position: 29-384
Cow position:
Alignm length: 365
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 68

Conread position: 29-384
Cow position:
Alignm length: 369
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 45

Conread position: 31-381
Cow position:
Alignm length: 358
Alignm identity: 242
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 202, 7

Conread position: 38-339
Cow position:
Alignm length: 311
Alignm identity: 212
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 111, 78

Conread position: 38-380
Cow position:
Alignm length: 350
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 85

Conread position: 38-381
Cow position:
Alignm length: 348
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 22

Conread position: 38-382
Cow position:
Alignm length: 351
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 85

Conread position: 38-384
Cow position:
Alignm length: 354
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 85

Conread position: 41-381
Cow position:
Alignm length: 350
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 67

Conread position: 45-313
Cow position:
Alignm length: 274
Alignm identity: 160
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 105, 71

Conread position: 49-384
Cow position:
Alignm length: 346
Alignm identity: 223
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 46, 37

Conread position: 50-381
Cow position:
Alignm length: 347
Alignm identity: 231
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 103, 73

Conread position: 53-271
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 184, 70

Conread position: 53-384
Cow position:
Alignm length: 343
Alignm identity: 236
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 80, 38

Conread position: 57-384
Cow position:
Alignm length: 343
Alignm identity: 238
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 92, 66

Conread position: 60-383
Cow position:
Alignm length: 331
Alignm identity: 227
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 6, 55

Conread position: 63-384
Cow position:
Alignm length: 338
Alignm identity: 231
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 91, 61

Conread position: 63-384
Cow position:
Alignm length: 324
Alignm identity: 222
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 236, 53

Conread position: 64-384
Cow position:
Alignm length: 325
Alignm identity: 227
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 110, 17

Conread position: 78-382
Cow position:
Alignm length: 313
Alignm identity: 227
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 11, 25

Conread position: 84-375
Cow position:
Alignm length: 294
Alignm identity: 214
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 161, 39

Conread position: 115-384
Cow position:
Alignm length: 277
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 116, 164

Conread position: 119-384
Cow position:
Alignm length: 271
Alignm identity: 180
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 114, 23

Conread position: 119-384
Cow position:
Alignm length: 273
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 112, 23

Conread position: 128-374
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 20, 162

Conread position: 131-378
Cow position:
Alignm length: 256
Alignm identity: 186
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 20, 61

Conread position: 151-384
Cow position:
Alignm length: 237
Alignm identity: 174
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 89

Conread position: 154-371
Cow position:
Alignm length: 228
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 135

Conread position: 154-380
Cow position:
Alignm length: 237
Alignm identity: 170
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 9, 141

Conread position: 154-382
Cow position:
Alignm length: 238
Alignm identity: 164
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 9, 135

Conread position: 158-374
Cow position:
Alignm length: 228
Alignm identity: 161
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 13, 131

Conread position: 161-374
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 70, 130

Conread position: 161-378
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 69, 130

Conread position: 161-378
Cow position:
Alignm length: 226
Alignm identity: 162
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 70, 130

Conread position: 161-379
Cow position:
Alignm length: 225
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 131

Conread position: 161-380
Cow position:
Alignm length: 227
Alignm identity: 158
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 70, 131

Conread position: 161-382
Cow position:
Alignm length: 229
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 24

Conread position: 161-384
Cow position:
Alignm length: 231
Alignm identity: 168
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 70, 131

Conread position: 165-384
Cow position:
Alignm length: 226
Alignm identity: 159
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 67, 101

Conread position: 172-382
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 66

Conread position: 173-382
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 58, 119

Conread position: 174-384
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 168, 27

Conread position: 203-384
Cow position:
Alignm length: 185
Alignm identity: 141
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 37, 84

Conread position: 204-378
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 28, 87

Conread position: 240-381
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 260-384
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 82, 25

Show alignments to all cow chromosomes.