Cow genome map


           Conread name:
           rspc031_h17.y1
        

               Conread position:
               1-342
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               40, 16
               

               Conread position:
               2-170
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               17, 107
               

               Conread position:
               2-223
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               17, 97
               

               Conread position:
               2-377
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 123
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               3-225
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               16, 78
               

               Conread position:
               3-378
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 16
               

               Conread position:
               3-381
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               17, 190
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 95
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 111
               

               Conread position:
               4-384
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 122
               

               Conread position:
               6-377
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 114
               

               Conread position:
               6-384
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 70
               

               Conread position:
               7-220
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 113
               

               Conread position:
               12-194
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               30, 107
               

               Conread position:
               12-267
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               10, 107
               

               Conread position:
               12-271
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               10, 69
               

               Conread position:
               14-171
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               27, 70
               

               Conread position:
               17-272
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               27, 101
               

               Conread position:
               17-384
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               265
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               27, 103
               

               Conread position:
               17-384
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               259
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               323, 99
               

               Conread position:
               17-384
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 101
               

               Conread position:
               17-384
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 101
               

               Conread position:
               19-283
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               15, 25
               

               Conread position:
               19-379
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 97
               

               Conread position:
               21-384
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 98
               

               Conread position:
               23-384
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 82
               

               Conread position:
               27-272
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               21, 101
               

               Conread position:
               27-276
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               15, 76
               

               Conread position:
               27-332
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               228
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-342
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-374
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 57
               

               Conread position:
               27-375
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 98
               

               Conread position:
               27-380
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 53
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 78
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 82
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 90
               

               Conread position:
               29-379
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 96
               

               Conread position:
               38-239
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               80, 155
               

               Conread position:
               38-374
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               113, 40
               

               Conread position:
               38-378
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               112, 22
               

               Conread position:
               38-383
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 22
               

               Conread position:
               44-342
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               50-384
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 53
               

               Conread position:
               50-384
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 65
               

               Conread position:
               50-384
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 61
               

               Conread position:
               60-327
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               60-376
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 66
               

               Conread position:
               119-384
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               116, 23
               

               Conread position:
               119-384
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               115, 31
               

               Conread position:
               133-383
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               11, 51
               

               Conread position:
               144-384
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               104, 94
               

               Conread position:
               152-384
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               82, 14
               

               Conread position:
               154-384
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               9, 139
               

               Conread position:
               154-384
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               9, 64
               

               Conread position:
               157-384
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               41, 131
               

               Conread position:
               159-384
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               19, 134
               

               Conread position:
               161-378
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               181, 77
               

               Conread position:
               161-379
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               70, 119
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               70, 130
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               76, 19
               

               Conread position:
               162-382
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 89
               

               Conread position:
               162-384
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               180, 18
               

               Conread position:
               177-378
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               72, 20
               

               Conread position:
               224-381
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               118, 24
               

               Conread position:
               227-384
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               114, 33
               

               Conread position:
               228-384
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               9, 60
               

               Conread position:
               252-384
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               90, 34
               
Show alignments to all cow chromosomes.