Cow genome map
Conread name: | rspc031_h17.y1 |
Conread position: | 1-342 |
Cow position: | chr16:5588839-5589178 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 225 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 40, 16 |
Conread position: | 2-170 |
Cow position: | chr16:28234012-28233850 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 135 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 17, 107 |
Conread position: | 2-223 |
Cow position: | chr16:15368925-15369145 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 174 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 17, 97 |
Conread position: | 2-377 |
Cow position: | chr16:39818276-39818638 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 10 |
Conread position: | 2-384 |
Cow position: | chr16:1429859-1430248 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 123 |
Conread position: | 2-384 |
Cow position: | chr16:19714194-19713827 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 10 |
Conread position: | 3-225 |
Cow position: | chr16:7483122-7483338 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 162 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 16, 78 |
Conread position: | 3-378 |
Cow position: | chr16:18688485-18688103 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 16 |
Conread position: | 3-381 |
Cow position: | chr16:25340596-25340989 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 274 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 17, 190 |
Conread position: | 3-384 |
Cow position: | chr16:25084261-25084642 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 95 |
Conread position: | 3-384 |
Cow position: | chr16:40297536-40297154 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 111 |
Conread position: | 4-384 |
Cow position: | chr16:49257956-49257543 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 122 |
Conread position: | 6-377 |
Cow position: | chr16:16029421-16029776 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 238 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 11, 114 |
Conread position: | 6-384 |
Cow position: | chr16:29031562-29031937 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 70 |
Conread position: | 7-220 |
Cow position: | chr16:34527389-34527604 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 155 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 14, 113 |
Conread position: | 12-194 |
Cow position: | chr16:5888113-5888299 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 135 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 30, 107 |
Conread position: | 12-267 |
Cow position: | chr16:44673649-44673912 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 183 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 10, 107 |
Conread position: | 12-271 |
Cow position: | chr16:49955859-49955611 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 192 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 10, 69 |
Conread position: | 14-171 |
Cow position: | chr16:25152491-25152649 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 123 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 27, 70 |
Conread position: | 17-272 |
Cow position: | chr16:36282079-36282326 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 180 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 27, 101 |
Conread position: | 17-384 |
Cow position: | chr16:7905319-7905664 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 265 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 27, 103 |
Conread position: | 17-384 |
Cow position: | chr16:11051852-11052194 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 259 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 323, 99 |
Conread position: | 17-384 |
Cow position: | chr16:20255642-20255286 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 101 |
Conread position: | 17-384 |
Cow position: | chr16:29676640-29676284 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 101 |
Conread position: | 19-283 |
Cow position: | chr16:334647-334911 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 200 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 15, 25 |
Conread position: | 19-379 |
Cow position: | chr16:36232944-36232582 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 97 |
Conread position: | 21-384 |
Cow position: | chr16:25458815-25458454 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 98 |
Conread position: | 23-384 |
Cow position: | chr16:2728653-2728292 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 82 |
Conread position: | 27-272 |
Cow position: | chr16:23981846-23982089 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 180 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 21, 101 |
Conread position: | 27-276 |
Cow position: | chr16:26661344-26661589 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 186 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 15, 76 |
Conread position: | 27-332 |
Cow position: | chr16:29045697-29045999 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 228 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 23, 98 |
Conread position: | 27-342 |
Cow position: | chr16:2412349-2412039 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 235 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 23, 98 |
Conread position: | 27-374 |
Cow position: | chr16:16687536-16687878 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 57 |
Conread position: | 27-375 |
Cow position: | chr16:51083236-51083583 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 98 |
Conread position: | 27-380 |
Cow position: | chr16:2484471-2484120 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 98 |
Conread position: | 27-384 |
Cow position: | chr16:408364-408011 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 53 |
Conread position: | 27-384 |
Cow position: | chr16:1568777-1568429 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 78 |
Conread position: | 27-384 |
Cow position: | chr16:7677028-7676673 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 98 |
Conread position: | 27-384 |
Cow position: | chr16:9776803-9777152 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 98 |
Conread position: | 27-384 |
Cow position: | chr16:10204750-10204394 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 82 |
Conread position: | 27-384 |
Cow position: | chr16:12539257-12538904 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 98 |
Conread position: | 27-384 |
Cow position: | chr16:28472430-28472075 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 90 |
Conread position: | 29-379 |
Cow position: | chr16:25440284-25440630 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 96 |
Conread position: | 38-239 |
Cow position: | chr16:12302778-12302576 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 148 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 80, 155 |
Conread position: | 38-374 |
Cow position: | chr16:29981951-29982287 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 243 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 113, 40 |
Conread position: | 38-378 |
Cow position: | chr16:32934818-32935163 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 245 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 112, 22 |
Conread position: | 38-383 |
Cow position: | chr16:49236436-49236093 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 22 |
Conread position: | 44-342 |
Cow position: | chr16:54647030-54647311 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 200 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 50-384 |
Cow position: | chr16:14667097-14666767 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 53 |
Conread position: | 50-384 |
Cow position: | chr16:15183498-15183827 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 191, 65 |
Conread position: | 50-384 |
Cow position: | chr16:15565444-15565771 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 61 |
Conread position: | 60-327 |
Cow position: | chr16:37446646-37446390 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 196 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 60-376 |
Cow position: | chr16:42051647-42051330 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 66 |
Conread position: | 119-384 |
Cow position: | chr16:5918232-5918506 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 181 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 116, 23 |
Conread position: | 119-384 |
Cow position: | chr16:43898509-43898248 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 201 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 115, 31 |
Conread position: | 133-383 |
Cow position: | chr16:31593142-31592886 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 192 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 11, 51 |
Conread position: | 144-384 |
Cow position: | chr16:31538-31780 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 175 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 104, 94 |
Conread position: | 152-384 |
Cow position: | chr16:9929345-9929577 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 168 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 82, 14 |
Conread position: | 154-384 |
Cow position: | chr16:21185064-21185302 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 163 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 9, 139 |
Conread position: | 154-384 |
Cow position: | chr16:32605608-32605848 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 164 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 9, 64 |
Conread position: | 157-384 |
Cow position: | chr16:10437048-10437278 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 159 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 41, 131 |
Conread position: | 159-384 |
Cow position: | chr16:24881899-24881666 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 170 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 19, 134 |
Conread position: | 161-378 |
Cow position: | chr16:5660666-5660882 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 154 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 181, 77 |
Conread position: | 161-379 |
Cow position: | chr16:28171568-28171347 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 165 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 70, 119 |
Conread position: | 161-384 |
Cow position: | chr16:6942414-6942643 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 162 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 70, 130 |
Conread position: | 161-384 |
Cow position: | chr16:23253706-23253482 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 165 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 76, 19 |
Conread position: | 162-382 |
Cow position: | chr16:25157419-25157199 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 89 |
Conread position: | 162-384 |
Cow position: | chr16:15491515-15491728 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 165 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 180, 18 |
Conread position: | 177-378 |
Cow position: | chr16:31376413-31376212 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 144 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 72, 20 |
Conread position: | 224-381 |
Cow position: | chr16:42740554-42740399 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 129 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 118, 24 |
Conread position: | 227-384 |
Cow position: | chr16:26662619-26662771 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 120 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 114, 33 |
Conread position: | 228-384 |
Cow position: | chr16:15369304-15369459 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 119 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 9, 60 |
Conread position: | 252-384 |
Cow position: | chr16:6549632-6549500 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 105 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 90, 34 |
Show alignments to all cow chromosomes.