Cow genome map

Conread name: rspc031_h17.y1

Conread position: 2-220
Cow position: chr19:30371491-30371697 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 17, 9

Conread position: 2-235
Cow position: chr19:353212-352984 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 17, 117

Conread position: 2-252
Cow position: chr19:24748377-24748644 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 17, 118

Conread position: 2-375
Cow position: chr19:32238404-32238064 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 265
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 9

Conread position: 2-383
Cow position: chr19:801433-801801 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 268
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 17, 9

Conread position: 2-384
Cow position: chr19:4252919-4252548 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 9

Conread position: 3-178
Cow position: chr19:39687446-39687626 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 16, 55

Conread position: 3-271
Cow position: chr19:7487490-7487757 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 15, 123

Conread position: 3-373
Cow position: chr19:52152847-52152451 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 272
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 18, 123

Conread position: 3-377
Cow position: chr19:685248-685657 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 278
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 18, 318

Conread position: 3-378
Cow position: chr19:32212664-32212257 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 274
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 22, 315

Conread position: 3-384
Cow position: chr19:171646-172020 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 3-384
Cow position: chr19:772011-772419 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 283
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 95

Conread position: 3-384
Cow position: chr19:39389957-39390331 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 23

Conread position: 3-384
Cow position: chr19:40853002-40852621 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 273
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 47

Conread position: 6-381
Cow position: chr19:4533320-4532941 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 261
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 38, 11

Conread position: 11-384
Cow position: chr19:33857-34233 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 106

Conread position: 11-384
Cow position: chr19:76805-76424 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 115

Conread position: 12-384
Cow position: chr19:351115-350766 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 107

Conread position: 16-332
Cow position: chr19:32223975-32223654 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 100

Conread position: 17-178
Cow position: chr19:32665011-32665176 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 101

Conread position: 17-377
Cow position: chr19:6552855-6553209 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 258
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 25, 72

Conread position: 17-380
Cow position: chr19:1031572-1031919 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 258
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 27, 101

Conread position: 17-384
Cow position: chr19:416110-416455 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 266
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 27, 102

Conread position: 17-384
Cow position: chr19:29209018-29209376 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 61

Conread position: 19-380
Cow position: chr19:42649615-42649262 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 241
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 68

Conread position: 23-372
Cow position: chr19:27053373-27053034 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 35

Conread position: 27-381
Cow position: chr19:440178-439840 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 248
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 23, 98

Conread position: 27-384
Cow position: chr19:203421-203771 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 23, 70

Conread position: 27-384
Cow position: chr19:10672852-10672497 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 98

Conread position: 27-384
Cow position: chr19:28582176-28581832 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 14

Conread position: 27-384
Cow position: chr19:33872698-33873048 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 98

Conread position: 27-384
Cow position: chr19:33941071-33941421 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 85

Conread position: 27-384
Cow position: chr19:55078204-55078555 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 98

Conread position: 31-384
Cow position: chr19:544446-544081 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 255
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 123, 7

Conread position: 38-354
Cow position: chr19:562239-561924 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 11

Conread position: 38-379
Cow position: chr19:260902-261244 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 79

Conread position: 42-382
Cow position: chr19:40888162-40887839 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 300, 68

Conread position: 50-293
Cow position: chr19:894081-893843 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 190, 73

Conread position: 50-384
Cow position: chr19:4384957-4385294 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 243
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 86, 73

Conread position: 134-372
Cow position: chr19:32665085-32665330 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 6

Conread position: 143-384
Cow position: chr19:378311-378076 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 190, 95

Conread position: 154-378
Cow position: chr19:32193155-32193386 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 9, 135

Conread position: 158-375
Cow position: chr19:547969-548196 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 35

Conread position: 158-377
Cow position: chr19:43143294-43143517 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 132

Conread position: 161-381
Cow position: chr19:37487-37713 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 70, 132

Conread position: 161-382
Cow position: chr19:7341652-7341879 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 70, 131

Conread position: 161-384
Cow position: chr19:28592870-28593086 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 181, 74

Conread position: 175-272
Cow position: chr19:39687854-39687951 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 252-384
Cow position: chr19:30371953-30372085 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 84, 33

Conread position: 260-381
Cow position: chr19:39688235-39688355 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 80, 26

Conread position: 261-384
Cow position: chr19:7487999-7488122 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 81, 25

Show alignments to all cow chromosomes.