Cow genome map
Conread name: | rspc031_h17.y1 |
Conread position: | 2-220 |
Cow position: | chr19:30371491-30371697 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 158 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 17, 9 |
Conread position: | 2-235 |
Cow position: | chr19:353212-352984 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 177 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 17, 117 |
Conread position: | 2-252 |
Cow position: | chr19:24748377-24748644 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 196 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 17, 118 |
Conread position: | 2-375 |
Cow position: | chr19:32238404-32238064 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 265 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 17, 9 |
Conread position: | 2-383 |
Cow position: | chr19:801433-801801 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 268 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 17, 9 |
Conread position: | 2-384 |
Cow position: | chr19:4252919-4252548 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 9 |
Conread position: | 3-178 |
Cow position: | chr19:39687446-39687626 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 142 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 16, 55 |
Conread position: | 3-271 |
Cow position: | chr19:7487490-7487757 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 194 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 15, 123 |
Conread position: | 3-373 |
Cow position: | chr19:52152847-52152451 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 272 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 18, 123 |
Conread position: | 3-377 |
Cow position: | chr19:685248-685657 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 278 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 18, 318 |
Conread position: | 3-378 |
Cow position: | chr19:32212664-32212257 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 274 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 22, 315 |
Conread position: | 3-384 |
Cow position: | chr19:171646-172020 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 15 |
Conread position: | 3-384 |
Cow position: | chr19:772011-772419 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 283 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 18, 95 |
Conread position: | 3-384 |
Cow position: | chr19:39389957-39390331 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 23 |
Conread position: | 3-384 |
Cow position: | chr19:40853002-40852621 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 273 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 16, 47 |
Conread position: | 6-381 |
Cow position: | chr19:4533320-4532941 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 261 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 38, 11 |
Conread position: | 11-384 |
Cow position: | chr19:33857-34233 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 106 |
Conread position: | 11-384 |
Cow position: | chr19:76805-76424 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 115 |
Conread position: | 12-384 |
Cow position: | chr19:351115-350766 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 107 |
Conread position: | 16-332 |
Cow position: | chr19:32223975-32223654 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 100 |
Conread position: | 17-178 |
Cow position: | chr19:32665011-32665176 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 123 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 27, 101 |
Conread position: | 17-377 |
Cow position: | chr19:6552855-6553209 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 258 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 25, 72 |
Conread position: | 17-380 |
Cow position: | chr19:1031572-1031919 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 258 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 27, 101 |
Conread position: | 17-384 |
Cow position: | chr19:416110-416455 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 266 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 27, 102 |
Conread position: | 17-384 |
Cow position: | chr19:29209018-29209376 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 61 |
Conread position: | 19-380 |
Cow position: | chr19:42649615-42649262 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 241 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 24, 68 |
Conread position: | 23-372 |
Cow position: | chr19:27053373-27053034 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 35 |
Conread position: | 27-381 |
Cow position: | chr19:440178-439840 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 248 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 23, 98 |
Conread position: | 27-384 |
Cow position: | chr19:203421-203771 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 258 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 23, 70 |
Conread position: | 27-384 |
Cow position: | chr19:10672852-10672497 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 98 |
Conread position: | 27-384 |
Cow position: | chr19:28582176-28581832 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 14 |
Conread position: | 27-384 |
Cow position: | chr19:33872698-33873048 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 98 |
Conread position: | 27-384 |
Cow position: | chr19:33941071-33941421 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 85 |
Conread position: | 27-384 |
Cow position: | chr19:55078204-55078555 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 98 |
Conread position: | 31-384 |
Cow position: | chr19:544446-544081 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 255 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 123, 7 |
Conread position: | 38-354 |
Cow position: | chr19:562239-561924 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 11 |
Conread position: | 38-379 |
Cow position: | chr19:260902-261244 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 79 |
Conread position: | 42-382 |
Cow position: | chr19:40888162-40887839 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 245 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 300, 68 |
Conread position: | 50-293 |
Cow position: | chr19:894081-893843 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 183 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 190, 73 |
Conread position: | 50-384 |
Cow position: | chr19:4384957-4385294 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 243 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 86, 73 |
Conread position: | 134-372 |
Cow position: | chr19:32665085-32665330 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 173 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 17, 6 |
Conread position: | 143-384 |
Cow position: | chr19:378311-378076 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 182 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 190, 95 |
Conread position: | 154-378 |
Cow position: | chr19:32193155-32193386 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 163 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 9, 135 |
Conread position: | 158-375 |
Cow position: | chr19:547969-548196 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 167 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 60, 35 |
Conread position: | 158-377 |
Cow position: | chr19:43143294-43143517 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 158 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 12, 132 |
Conread position: | 161-381 |
Cow position: | chr19:37487-37713 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 166 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 70, 132 |
Conread position: | 161-382 |
Cow position: | chr19:7341652-7341879 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 169 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 70, 131 |
Conread position: | 161-384 |
Cow position: | chr19:28592870-28593086 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 159 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 181, 74 |
Conread position: | 175-272 |
Cow position: | chr19:39687854-39687951 (view UCSC Genome Browser custom track) |
Alignm length: | 98 |
Alignm identity: | 81 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 252-384 |
Cow position: | chr19:30371953-30372085 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 107 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 84, 33 |
Conread position: | 260-381 |
Cow position: | chr19:39688235-39688355 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 101 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 80, 26 |
Conread position: | 261-384 |
Cow position: | chr19:7487999-7488122 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 98 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 81, 25 |
Show alignments to all cow chromosomes.