Cow genome map

Conread name: rspc031_h17.y1

Conread position: 2-251
Cow position:
Alignm length: 273
Alignm identity: 201
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 17, 139

Conread position: 2-370
Cow position:
Alignm length: 373
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 82

Conread position: 2-375
Cow position:
Alignm length: 377
Alignm identity: 271
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 22

Conread position: 2-380
Cow position:
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 82

Conread position: 2-382
Cow position:
Alignm length: 387
Alignm identity: 274
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 17, 117

Conread position: 2-383
Cow position:
Alignm length: 400
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 64

Conread position: 2-384
Cow position:
Alignm length: 395
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 126

Conread position: 3-201
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 111

Conread position: 3-271
Cow position:
Alignm length: 281
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 123

Conread position: 3-309
Cow position:
Alignm length: 340
Alignm identity: 240
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 17, 103

Conread position: 3-375
Cow position:
Alignm length: 389
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 105

Conread position: 3-378
Cow position:
Alignm length: 379
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 36

Conread position: 3-378
Cow position:
Alignm length: 383
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 150

Conread position: 3-380
Cow position:
Alignm length: 387
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 122

Conread position: 3-381
Cow position:
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 125

Conread position: 3-382
Cow position:
Alignm length: 405
Alignm identity: 270
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 18, 250

Conread position: 3-383
Cow position:
Alignm length: 390
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 125

Conread position: 3-384
Cow position:
Alignm length: 391
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 123

Conread position: 3-384
Cow position:
Alignm length: 395
Alignm identity: 270
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 16, 126

Conread position: 3-384
Cow position:
Alignm length: 395
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 119

Conread position: 3-384
Cow position:
Alignm length: 392
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 25

Conread position: 3-384
Cow position:
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 3-384
Cow position:
Alignm length: 391
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 128

Conread position: 4-237
Cow position:
Alignm length: 237
Alignm identity: 169
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 146, 10

Conread position: 5-376
Cow position:
Alignm length: 381
Alignm identity: 247
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 13, 98

Conread position: 5-378
Cow position:
Alignm length: 390
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 122

Conread position: 5-381
Cow position:
Alignm length: 384
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 114

Conread position: 5-382
Cow position:
Alignm length: 388
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 61

Conread position: 7-289
Cow position:
Alignm length: 294
Alignm identity: 204
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 121

Conread position: 7-372
Cow position:
Alignm length: 384
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 294

Conread position: 7-381
Cow position:
Alignm length: 409
Alignm identity: 271
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 310

Conread position: 10-378
Cow position:
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 74

Conread position: 10-384
Cow position:
Alignm length: 384
Alignm identity: 265
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 28, 9

Conread position: 17-227
Cow position:
Alignm length: 216
Alignm identity: 164
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 27, 43

Conread position: 17-237
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 74

Conread position: 17-342
Cow position:
Alignm length: 337
Alignm identity: 226
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 69

Conread position: 17-376
Cow position:
Alignm length: 366
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 146

Conread position: 17-378
Cow position:
Alignm length: 368
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 18

Conread position: 17-381
Cow position:
Alignm length: 370
Alignm identity: 255
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 25, 99

Conread position: 17-383
Cow position:
Alignm length: 373
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 101

Conread position: 17-383
Cow position:
Alignm length: 371
Alignm identity: 255
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 127, 31

Conread position: 17-384
Cow position:
Alignm length: 374
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 101

Conread position: 17-384
Cow position:
Alignm length: 379
Alignm identity: 270
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 15, 46

Conread position: 17-384
Cow position:
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 95

Conread position: 17-384
Cow position:
Alignm length: 372
Alignm identity: 260
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 30, 20

Conread position: 19-244
Cow position:
Alignm length: 249
Alignm identity: 190
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 21, 123

Conread position: 19-312
Cow position:
Alignm length: 306
Alignm identity: 219
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 23, 79

Conread position: 19-368
Cow position:
Alignm length: 356
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 49

Conread position: 19-378
Cow position:
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 99

Conread position: 21-370
Cow position:
Alignm length: 363
Alignm identity: 257
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 21, 61

Conread position: 21-380
Cow position:
Alignm length: 369
Alignm identity: 244
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 94

Conread position: 23-384
Cow position:
Alignm length: 371
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 102

Conread position: 25-384
Cow position:
Alignm length: 373
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 58

Conread position: 27-361
Cow position:
Alignm length: 344
Alignm identity: 244
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 23, 98

Conread position: 27-374
Cow position:
Alignm length: 356
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 98

Conread position: 27-381
Cow position:
Alignm length: 358
Alignm identity: 255
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 23, 98

Conread position: 27-381
Cow position:
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 53

Conread position: 27-382
Cow position:
Alignm length: 366
Alignm identity: 258
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 28, 42

Conread position: 27-382
Cow position:
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 99

Conread position: 27-384
Cow position:
Alignm length: 361
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 98

Conread position: 27-384
Cow position:
Alignm length: 378
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 98

Conread position: 27-384
Cow position:
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 99

Conread position: 27-384
Cow position:
Alignm length: 367
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 98

Conread position: 27-384
Cow position:
Alignm length: 384
Alignm identity: 265
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 23, 91

Conread position: 28-382
Cow position:
Alignm length: 365
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 81

Conread position: 33-225
Cow position:
Alignm length: 202
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 114, 90

Conread position: 38-263
Cow position:
Alignm length: 230
Alignm identity: 171
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 112, 78

Conread position: 38-372
Cow position:
Alignm length: 339
Alignm identity: 229
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 112, 54

Conread position: 38-384
Cow position:
Alignm length: 353
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 38

Conread position: 38-384
Cow position:
Alignm length: 354
Alignm identity: 229
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 190, 78

Conread position: 38-384
Cow position:
Alignm length: 353
Alignm identity: 259
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 46, 79

Conread position: 41-379
Cow position:
Alignm length: 349
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 25

Conread position: 41-384
Cow position:
Alignm length: 347
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 82

Conread position: 43-215
Cow position:
Alignm length: 177
Alignm identity: 136
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 74

Conread position: 43-384
Cow position:
Alignm length: 345
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 80

Conread position: 45-261
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 207, 70

Conread position: 50-381
Cow position:
Alignm length: 339
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 73

Conread position: 50-383
Cow position:
Alignm length: 339
Alignm identity: 238
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 187, 66

Conread position: 50-384
Cow position:
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 73

Conread position: 60-384
Cow position:
Alignm length: 341
Alignm identity: 204
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 81, 20

Conread position: 63-384
Cow position:
Alignm length: 327
Alignm identity: 228
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 87, 20

Conread position: 67-374
Cow position:
Alignm length: 318
Alignm identity: 212
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 85, 19

Conread position: 67-384
Cow position:
Alignm length: 325
Alignm identity: 218
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 50

Conread position: 69-379
Cow position:
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 55

Conread position: 69-383
Cow position:
Alignm length: 323
Alignm identity: 236
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 168, 33

Conread position: 84-384
Cow position:
Alignm length: 307
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 5, 34

Conread position: 88-384
Cow position:
Alignm length: 303
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 35

Conread position: 108-383
Cow position:
Alignm length: 282
Alignm identity: 197
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 132, 42

Conread position: 154-384
Cow position:
Alignm length: 240
Alignm identity: 165
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 16, 135

Conread position: 154-384
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 9, 99

Conread position: 154-384
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 9, 135

Conread position: 158-384
Cow position:
Alignm length: 237
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 135

Conread position: 161-332
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 130

Conread position: 161-374
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 62, 131

Conread position: 161-377
Cow position:
Alignm length: 223
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 97

Conread position: 161-377
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 72, 131

Conread position: 161-381
Cow position:
Alignm length: 228
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 76, 130

Conread position: 161-383
Cow position:
Alignm length: 231
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 119

Conread position: 161-384
Cow position:
Alignm length: 232
Alignm identity: 159
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 131

Conread position: 161-384
Cow position:
Alignm length: 229
Alignm identity: 166
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 70, 128

Conread position: 161-384
Cow position:
Alignm length: 233
Alignm identity: 166
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 70, 118

Conread position: 161-384
Cow position:
Alignm length: 231
Alignm identity: 160
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 70, 126

Conread position: 161-384
Cow position:
Alignm length: 233
Alignm identity: 168
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 70, 131

Conread position: 161-384
Cow position:
Alignm length: 231
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 70, 128

Conread position: 161-384
Cow position:
Alignm length: 231
Alignm identity: 159
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 70, 130

Conread position: 183-380
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 13

Conread position: 184-378
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 47, 30

Conread position: 184-384
Cow position:
Alignm length: 208
Alignm identity: 145
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 108

Conread position: 207-383
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 86

Conread position: 237-378
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 105, 36

Conread position: 252-384
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 32

Show alignments to all cow chromosomes.