Cow genome map
| Conread name: | rspc031_h17.y1 |
| Conread position: | 2-235 |
| Cow position: | chr20:10846914-10846680 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 185 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 2-384 |
| Cow position: | chr20:3252744-3252373 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 16 |
| Conread position: | 2-384 |
| Cow position: | chr20:8314031-8313667 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 3-279 |
| Cow position: | chr20:4800228-4799957 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 23, 113 |
| Conread position: | 3-372 |
| Cow position: | chr20:10103160-10102791 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 96 |
| Conread position: | 3-376 |
| Cow position: | chr20:15064134-15064523 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 124 |
| Conread position: | 3-378 |
| Cow position: | chr20:11276899-11276526 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 125 |
| Conread position: | 3-384 |
| Cow position: | chr20:12439361-12438995 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 271 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 16, 125 |
| Conread position: | 3-384 |
| Cow position: | chr20:13762295-13762672 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 128 |
| Conread position: | 4-378 |
| Cow position: | chr20:19437326-19437725 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 273 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 17, 80 |
| Conread position: | 4-384 |
| Cow position: | chr20:23798261-23798648 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 125 |
| Conread position: | 5-374 |
| Cow position: | chr20:13681691-13681328 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 115 |
| Conread position: | 5-380 |
| Cow position: | chr20:22205928-22206295 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 13, 39 |
| Conread position: | 7-382 |
| Cow position: | chr20:21392965-21393337 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 29 |
| Conread position: | 11-174 |
| Cow position: | chr20:3032380-3032549 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 109 |
| Conread position: | 17-220 |
| Cow position: | chr20:5483622-5483823 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 27, 102 |
| Conread position: | 17-377 |
| Cow position: | chr20:8994403-8994057 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 289, 24 |
| Conread position: | 20-384 |
| Cow position: | chr20:28160170-28160547 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 258 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 30, 278 |
| Conread position: | 20-384 |
| Cow position: | chr20:30683743-30684105 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 105 |
| Conread position: | 21-271 |
| Cow position: | chr20:28566298-28566050 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 29, 131 |
| Conread position: | 27-381 |
| Cow position: | chr20:21913750-21914089 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 27-382 |
| Cow position: | chr20:28593148-28593511 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 263 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 13, 91 |
| Conread position: | 27-383 |
| Cow position: | chr20:7117059-7116705 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 98 |
| Conread position: | 27-384 |
| Cow position: | chr20:5534359-5534708 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 27-384 |
| Cow position: | chr20:8005101-8004747 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 27-384 |
| Cow position: | chr20:15291460-15291814 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 97 |
| Conread position: | 27-384 |
| Cow position: | chr20:23470249-23469894 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 27-384 |
| Cow position: | chr20:35118663-35119013 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 99 |
| Conread position: | 38-229 |
| Cow position: | chr20:24614007-24614189 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 189, 78 |
| Conread position: | 38-374 |
| Cow position: | chr20:37578878-37579210 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 86 |
| Conread position: | 38-380 |
| Cow position: | chr20:18316162-18315817 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 70 |
| Conread position: | 38-384 |
| Cow position: | chr20:19006177-19005863 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 109, 78 |
| Conread position: | 50-384 |
| Cow position: | chr20:27868634-27868963 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 53 |
| Conread position: | 53-384 |
| Cow position: | chr20:25851546-25851224 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 70 |
| Conread position: | 95-384 |
| Cow position: | chr20:4800175-4799879 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 38 |
| Conread position: | 154-342 |
| Cow position: | chr20:19192707-19192902 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 9, 127 |
| Conread position: | 154-384 |
| Cow position: | chr20:31123934-31124172 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 9, 135 |
| Conread position: | 158-384 |
| Cow position: | chr20:24614083-24614316 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 22, 134 |
| Conread position: | 161-377 |
| Cow position: | chr20:822295-822517 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 70, 131 |
| Conread position: | 184-381 |
| Cow position: | chr20:29947746-29947949 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 53, 107 |
| Conread position: | 215-382 |
| Cow position: | chr20:15098272-15098104 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 14, 72 |
| Conread position: | 257-384 |
| Cow position: | chr20:3270362-3270489 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 76, 28 |
Show alignments to all cow chromosomes.