Cow genome map


           Conread name:
           rspc031_h17.y1
        

               Conread position:
               2-176
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               17, 40
               

               Conread position:
               2-218
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               2-309
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               5, 18
               

               Conread position:
               2-375
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 92
               

               Conread position:
               2-380
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 113
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               3-211
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               15, 117
               

               Conread position:
               3-377
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 171
               

               Conread position:
               3-382
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               18, 311
               

               Conread position:
               3-383
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               17, 76
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               277
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               18, 314
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 126
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               286
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               18, 123
               

               Conread position:
               4-272
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               18, 116
               

               Conread position:
               5-384
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 94
               

               Conread position:
               7-371
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 38
               

               Conread position:
               7-384
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               278
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               13, 218
               

               Conread position:
               7-384
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 24
               

               Conread position:
               11-374
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               7, 80
               

               Conread position:
               12-190
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               7, 114
               

               Conread position:
               12-271
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               29, 113
               

               Conread position:
               17-288
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               27, 101
               

               Conread position:
               17-379
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               243
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               26, 76
               

               Conread position:
               17-382
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 25
               

               Conread position:
               17-382
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 100
               

               Conread position:
               17-384
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 76
               

               Conread position:
               17-384
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               325, 20
               

               Conread position:
               19-384
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               260
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               23, 65
               

               Conread position:
               20-235
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               22, 105
               

               Conread position:
               25-377
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 100
               

               Conread position:
               27-381
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 99
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 98
               

               Conread position:
               28-384
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 97
               

               Conread position:
               28-384
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               256
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               14, 89
               

               Conread position:
               31-383
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 94
               

               Conread position:
               38-374
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 28
               

               Conread position:
               41-371
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 68
               

               Conread position:
               44-384
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 72
               

               Conread position:
               50-349
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 74
               

               Conread position:
               50-380
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 73
               

               Conread position:
               50-381
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               104, 48
               

               Conread position:
               50-384
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 73
               

               Conread position:
               50-384
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               100, 73
               

               Conread position:
               53-383
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 70
               

               Conread position:
               53-384
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 71
               

               Conread position:
               103-384
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 20
               

               Conread position:
               108-324
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               40, 14
               

               Conread position:
               116-371
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 172
               

               Conread position:
               119-384
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 100
               

               Conread position:
               119-384
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               112, 29
               

               Conread position:
               134-374
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               16, 72
               

               Conread position:
               151-384
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               128, 88
               

               Conread position:
               158-384
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               67, 121
               

               Conread position:
               161-335
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               79, 19
               

               Conread position:
               161-381
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               70, 129
               

               Conread position:
               161-382
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               70, 131
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               72, 133
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               70, 126
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               73, 133
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               70, 118
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               70, 130
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               70, 131
               

               Conread position:
               165-326
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               132, 19
               

               Conread position:
               169-379
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               62, 122
               

               Conread position:
               169-379
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               62, 122
               

               Conread position:
               186-384
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               54, 103
               

               Conread position:
               208-384
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               221-384
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               11, 25
               

               Conread position:
               224-382
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 62
               

               Conread position:
               248-384
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               94, 37
               
Show alignments to all cow chromosomes.