Cow genome map
| Conread name: | rspc031_h17.y1 |
| Conread position: | 2-176 |
| Cow position: | chr22:11029986-11030158 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 17, 40 |
| Conread position: | 2-218 |
| Cow position: | chr22:10077388-10077168 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 10 |
| Conread position: | 2-309 |
| Cow position: | chr22:1046718-1047021 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 5, 18 |
| Conread position: | 2-375 |
| Cow position: | chr22:1285604-1285228 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 92 |
| Conread position: | 2-380 |
| Cow position: | chr22:8136861-8136483 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 113 |
| Conread position: | 2-384 |
| Cow position: | chr22:118454-118103 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 2-384 |
| Cow position: | chr22:5672094-5672451 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 2-384 |
| Cow position: | chr22:40380550-40380912 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 10 |
| Conread position: | 3-211 |
| Cow position: | chr22:46636656-46636443 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 15, 117 |
| Conread position: | 3-377 |
| Cow position: | chr22:1320950-1321325 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 171 |
| Conread position: | 3-382 |
| Cow position: | chr22:692942-693350 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 18, 311 |
| Conread position: | 3-383 |
| Cow position: | chr22:5933667-5933270 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 17, 76 |
| Conread position: | 3-384 |
| Cow position: | chr22:35673056-35672643 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 277 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 18, 314 |
| Conread position: | 3-384 |
| Cow position: | chr22:39470187-39469805 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 126 |
| Conread position: | 3-384 |
| Cow position: | chr22:44489195-44489603 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 286 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 18, 123 |
| Conread position: | 4-272 |
| Cow position: | chr22:5307417-5307696 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 18, 116 |
| Conread position: | 5-384 |
| Cow position: | chr22:15850660-15851054 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 94 |
| Conread position: | 7-371 |
| Cow position: | chr22:44608971-44609339 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 38 |
| Conread position: | 7-384 |
| Cow position: | chr22:327840-327436 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 278 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 13, 218 |
| Conread position: | 7-384 |
| Cow position: | chr22:42990514-42990884 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 24 |
| Conread position: | 11-374 |
| Cow position: | chr22:33350518-33350870 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 7, 80 |
| Conread position: | 12-190 |
| Cow position: | chr22:44353805-44353622 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 7, 114 |
| Conread position: | 12-271 |
| Cow position: | chr22:18817342-18817079 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 29, 113 |
| Conread position: | 17-288 |
| Cow position: | chr22:32487108-32486851 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 27, 101 |
| Conread position: | 17-379 |
| Cow position: | chr22:871485-871128 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 26, 76 |
| Conread position: | 17-382 |
| Cow position: | chr22:3307373-3307008 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 25 |
| Conread position: | 17-382 |
| Cow position: | chr22:36534608-36534254 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 100 |
| Conread position: | 17-384 |
| Cow position: | chr22:39882811-39882460 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 76 |
| Conread position: | 17-384 |
| Cow position: | chr22:42770919-42771260 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 20 |
| Conread position: | 19-384 |
| Cow position: | chr22:7276873-7277235 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 260 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 23, 65 |
| Conread position: | 20-235 |
| Cow position: | chr22:6332064-6332271 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 22, 105 |
| Conread position: | 25-377 |
| Cow position: | chr22:13772138-13772500 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 100 |
| Conread position: | 27-381 |
| Cow position: | chr22:34167680-34168041 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 99 |
| Conread position: | 27-384 |
| Cow position: | chr22:19144340-19143985 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 27-384 |
| Cow position: | chr22:21588696-21589045 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 98 |
| Conread position: | 28-384 |
| Cow position: | chr22:31312703-31313057 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 28-384 |
| Cow position: | chr22:44456671-44457026 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 256 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 31-383 |
| Cow position: | chr22:1294139-1293780 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 94 |
| Conread position: | 38-374 |
| Cow position: | chr22:45880743-45880418 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 28 |
| Conread position: | 41-371 |
| Cow position: | chr22:37073784-37073454 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 68 |
| Conread position: | 44-384 |
| Cow position: | chr22:36736157-36736486 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 72 |
| Conread position: | 50-349 |
| Cow position: | chr22:27387008-27386709 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 74 |
| Conread position: | 50-380 |
| Cow position: | chr22:561316-560991 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 73 |
| Conread position: | 50-381 |
| Cow position: | chr22:36180516-36180854 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 104, 48 |
| Conread position: | 50-384 |
| Cow position: | chr22:17329354-17329027 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 73 |
| Conread position: | 50-384 |
| Cow position: | chr22:46585937-46585599 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 238 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 100, 73 |
| Conread position: | 53-383 |
| Cow position: | chr22:526524-526197 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 70 |
| Conread position: | 53-384 |
| Cow position: | chr22:44933365-44933692 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 71 |
| Conread position: | 103-384 |
| Cow position: | chr22:37131092-37131364 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 20 |
| Conread position: | 108-324 |
| Cow position: | chr22:48004099-48004319 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 40, 14 |
| Conread position: | 116-371 |
| Cow position: | chr22:6504212-6503957 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 172 |
| Conread position: | 119-384 |
| Cow position: | chr22:1271058-1270794 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 100 |
| Conread position: | 119-384 |
| Cow position: | chr22:6984697-6984967 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 112, 29 |
| Conread position: | 134-374 |
| Cow position: | chr22:12732602-12732357 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 16, 72 |
| Conread position: | 151-384 |
| Cow position: | chr22:1318878-1319108 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 128, 88 |
| Conread position: | 158-384 |
| Cow position: | chr22:16199975-16200207 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 67, 121 |
| Conread position: | 161-335 |
| Cow position: | chr22:15314872-15314694 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 79, 19 |
| Conread position: | 161-381 |
| Cow position: | chr22:37264937-37265158 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 70, 129 |
| Conread position: | 161-382 |
| Cow position: | chr22:44370130-44369904 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 70, 131 |
| Conread position: | 161-384 |
| Cow position: | chr22:5307600-5307830 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 72, 133 |
| Conread position: | 161-384 |
| Cow position: | chr22:10546134-10546363 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 70, 126 |
| Conread position: | 161-384 |
| Cow position: | chr22:10910371-10910139 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 73, 133 |
| Conread position: | 161-384 |
| Cow position: | chr22:18476277-18476050 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 70, 118 |
| Conread position: | 161-384 |
| Cow position: | chr22:24949313-24949542 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 70, 130 |
| Conread position: | 161-384 |
| Cow position: | chr22:27310293-27310064 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 70, 131 |
| Conread position: | 165-326 |
| Cow position: | chr22:11030477-11030631 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 132, 19 |
| Conread position: | 169-379 |
| Cow position: | chr22:3278858-3278640 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 62, 122 |
| Conread position: | 169-379 |
| Cow position: | chr22:5233805-5233587 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 62, 122 |
| Conread position: | 186-384 |
| Cow position: | chr22:31335522-31335320 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 54, 103 |
| Conread position: | 208-384 |
| Cow position: | chr22:46636158-46635983 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 221-384 |
| Cow position: | chr22:36861984-36861818 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 11, 25 |
| Conread position: | 224-382 |
| Cow position: | chr22:41420134-41419974 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 62 |
| Conread position: | 248-384 |
| Cow position: | chr22:44395359-44395494 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 94, 37 |
Show alignments to all cow chromosomes.