Cow genome map
| Conread name: | rspc031_h17.y1 |
| Conread position: | 1-378 |
| Cow position: | chr23:14975463-14975055 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 284 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 19, 6 |
| Conread position: | 2-216 |
| Cow position: | chr23:810460-810677 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 17, 118 |
| Conread position: | 2-383 |
| Cow position: | chr23:31595838-31595465 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 267 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 17, 117 |
| Conread position: | 2-384 |
| Cow position: | chr23:3012972-3013346 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 117 |
| Conread position: | 3-383 |
| Cow position: | chr23:28216593-28217003 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 18, 303 |
| Conread position: | 3-384 |
| Cow position: | chr23:5875416-5875059 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 113 |
| Conread position: | 5-382 |
| Cow position: | chr23:34174533-34174897 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 67 |
| Conread position: | 5-384 |
| Cow position: | chr23:2796218-2795849 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 270 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 45, 5 |
| Conread position: | 6-376 |
| Cow position: | chr23:19333070-19332696 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 247 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 9, 115 |
| Conread position: | 7-271 |
| Cow position: | chr23:2573620-2573890 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 13, 30 |
| Conread position: | 7-382 |
| Cow position: | chr23:2027789-2027415 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 61 |
| Conread position: | 10-383 |
| Cow position: | chr23:2045376-2045740 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 7 |
| Conread position: | 19-261 |
| Cow position: | chr23:2525092-2524856 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 25, 99 |
| Conread position: | 20-371 |
| Cow position: | chr23:16617483-16617137 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 22, 42 |
| Conread position: | 21-372 |
| Cow position: | chr23:1025701-1025350 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 105 |
| Conread position: | 22-384 |
| Cow position: | chr23:4509450-4509819 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 103 |
| Conread position: | 24-381 |
| Cow position: | chr23:2765987-2765658 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 242 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 25, 92 |
| Conread position: | 25-225 |
| Cow position: | chr23:7269940-7270130 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 81 |
| Conread position: | 27-371 |
| Cow position: | chr23:15176413-15176751 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 101 |
| Conread position: | 27-377 |
| Cow position: | chr23:1140924-1141274 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 56 |
| Conread position: | 27-382 |
| Cow position: | chr23:36032012-36031659 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 27-383 |
| Cow position: | chr23:11777846-11778198 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 27-384 |
| Cow position: | chr23:2756862-2757214 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 23, 8 |
| Conread position: | 27-384 |
| Cow position: | chr23:14966591-14966260 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 28, 97 |
| Conread position: | 27-384 |
| Cow position: | chr23:19488890-19489253 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 90 |
| Conread position: | 27-384 |
| Cow position: | chr23:28912771-28913125 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 29-379 |
| Cow position: | chr23:15220533-15220185 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 96 |
| Conread position: | 29-384 |
| Cow position: | chr23:4815443-4815787 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 82 |
| Conread position: | 32-384 |
| Cow position: | chr23:27398869-27399216 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 83 |
| Conread position: | 38-384 |
| Cow position: | chr23:4641249-4640912 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 86 |
| Conread position: | 43-384 |
| Cow position: | chr23:989251-988928 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 245 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 103, 57 |
| Conread position: | 50-304 |
| Cow position: | chr23:4888151-4888398 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 190, 74 |
| Conread position: | 50-381 |
| Cow position: | chr23:3882309-3881985 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 184, 43 |
| Conread position: | 50-384 |
| Cow position: | chr23:2715721-2716064 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 73 |
| Conread position: | 50-384 |
| Cow position: | chr23:22147894-22147546 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 73 |
| Conread position: | 53-384 |
| Cow position: | chr23:4276354-4276671 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 23 |
| Conread position: | 53-384 |
| Cow position: | chr23:15525009-15525326 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 71 |
| Conread position: | 63-309 |
| Cow position: | chr23:8981412-8981183 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 88, 53 |
| Conread position: | 76-347 |
| Cow position: | chr23:19449425-19449699 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 76, 15 |
| Conread position: | 115-383 |
| Cow position: | chr23:4433916-4434178 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 123, 33 |
| Conread position: | 158-384 |
| Cow position: | chr23:22876144-22875916 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 73, 39 |
| Conread position: | 161-342 |
| Cow position: | chr23:2314045-2313861 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 70, 45 |
| Conread position: | 161-381 |
| Cow position: | chr23:4359321-4359546 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 70, 118 |
| Conread position: | 161-382 |
| Cow position: | chr23:19951101-19950874 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 77, 130 |
| Conread position: | 161-384 |
| Cow position: | chr23:20301695-20301924 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 70, 102 |
| Conread position: | 202-384 |
| Cow position: | chr23:7273188-7273373 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 25, 14 |
| Conread position: | 248-384 |
| Cow position: | chr23:967771-967635 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 94, 37 |
| Conread position: | 248-384 |
| Cow position: | chr23:1330709-1330573 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 92, 36 |
| Conread position: | 252-384 |
| Cow position: | chr23:5779505-5779373 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 88, 36 |
| Conread position: | 259-384 |
| Cow position: | chr23:2574153-2574278 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 83, 26 |
Show alignments to all cow chromosomes.