Cow genome map
| Conread name: | rspc031_h17.y1 |
| Conread position: | 2-213 |
| Cow position: | chr27:15331345-15331554 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 17, 30 |
| Conread position: | 2-237 |
| Cow position: | chr27:25003165-25002935 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 17, 11 |
| Conread position: | 2-257 |
| Cow position: | chr27:16438681-16438942 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 17, 10 |
| Conread position: | 2-329 |
| Cow position: | chr27:5985762-5985437 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 15 |
| Conread position: | 3-384 |
| Cow position: | chr27:25805543-25805168 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 115 |
| Conread position: | 3-384 |
| Cow position: | chr27:26556653-26556262 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 124 |
| Conread position: | 4-384 |
| Cow position: | chr27:23334494-23334876 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 126 |
| Conread position: | 4-384 |
| Cow position: | chr27:27051025-27051377 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 272 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 15, 114 |
| Conread position: | 7-384 |
| Cow position: | chr27:892552-892925 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 13-378 |
| Cow position: | chr27:25999707-25999341 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 266 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 5, 56 |
| Conread position: | 17-382 |
| Cow position: | chr27:16431848-16432182 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 249 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 27, 101 |
| Conread position: | 21-378 |
| Cow position: | chr27:25116602-25116960 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 256 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 21, 6 |
| Conread position: | 27-324 |
| Cow position: | chr27:15639152-15638858 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 27-375 |
| Cow position: | chr27:9993833-9993488 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 53 |
| Conread position: | 27-381 |
| Cow position: | chr27:5910225-5910577 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 15, 100 |
| Conread position: | 27-382 |
| Cow position: | chr27:11472034-11471680 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 98 |
| Conread position: | 27-384 |
| Cow position: | chr27:26324173-26324527 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 27-384 |
| Cow position: | chr27:27662252-27662607 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 91 |
| Conread position: | 38-371 |
| Cow position: | chr27:27307771-27308071 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 304, 78 |
| Conread position: | 50-384 |
| Cow position: | chr27:14461074-14460743 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 75 |
| Conread position: | 53-384 |
| Cow position: | chr27:1208742-1209065 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 97 |
| Conread position: | 61-380 |
| Cow position: | chr27:13897584-13897904 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 10, 93 |
| Conread position: | 73-237 |
| Cow position: | chr27:15279220-15279054 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 77, 37 |
| Conread position: | 151-382 |
| Cow position: | chr27:23930655-23930433 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 17, 8 |
| Conread position: | 154-384 |
| Cow position: | chr27:15540806-15541038 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 9, 132 |
| Conread position: | 161-384 |
| Cow position: | chr27:2364227-2364464 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 139 |
| Conread position: | 161-384 |
| Cow position: | chr27:16034905-16034679 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 70, 128 |
| Conread position: | 260-384 |
| Cow position: | chr27:15278476-15278352 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 82, 25 |
Show alignments to all cow chromosomes.