Cow genome map


           Conread name:
           rspc031_h17.y1
        

               Conread position:
               2-237
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               2-248
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               16, 9
               

               Conread position:
               2-300
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               16, 36
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 67
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 69
               

               Conread position:
               3-380
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 85
               

               Conread position:
               3-381
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 126
               

               Conread position:
               3-381
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 123
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 106
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 12
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 27
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 117
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 98
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 126
               

               Conread position:
               5-378
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 13
               

               Conread position:
               5-384
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 113
               

               Conread position:
               5-384
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 121
               

               Conread position:
               7-371
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 10
               

               Conread position:
               11-381
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 7
               

               Conread position:
               11-384
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 51
               

               Conread position:
               17-245
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 101
               

               Conread position:
               17-384
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 101
               

               Conread position:
               19-377
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               251
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               24, 108
               

               Conread position:
               19-384
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 79
               

               Conread position:
               21-374
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               252
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               22, 59
               

               Conread position:
               27-381
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-381
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-381
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-381
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               253
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               32, 98
               

               Conread position:
               27-382
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 127
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 87
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 79
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 97
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 104
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 99
               

               Conread position:
               28-384
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 97
               

               Conread position:
               34-365
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 49
               

               Conread position:
               50-345
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               186, 73
               

               Conread position:
               50-384
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 73
               

               Conread position:
               50-384
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 47
               

               Conread position:
               50-384
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 73
               

               Conread position:
               50-384
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 73
               

               Conread position:
               50-384
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 62
               

               Conread position:
               54-384
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               180, 33
               

               Conread position:
               55-382
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               185, 68
               

               Conread position:
               77-382
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               225
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               160, 46
               

               Conread position:
               154-384
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               9, 135
               

               Conread position:
               161-380
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               87, 130
               

               Conread position:
               161-383
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               70, 136
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               70, 130
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               70, 132
               

               Conread position:
               184-384
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               158, 38
               

               Conread position:
               193-378
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 99
               

               Conread position:
               217-384
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               37, 71
               

               Conread position:
               259-384
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               83, 26
               

               Conread position:
               260-384
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               82, 25
               
Show alignments to all cow chromosomes.