Cow genome map


           Conread name:
           rspc031_h17.y1
        

               Conread position:
               2-262
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               2-381
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 125
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 117
               

               Conread position:
               3-375
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 124
               

               Conread position:
               3-382
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               257
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               18, 95
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               275
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               16, 128
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 106
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 126
               

               Conread position:
               5-215
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 36
               

               Conread position:
               10-349
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 114
               

               Conread position:
               10-349
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 114
               

               Conread position:
               12-307
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 108
               

               Conread position:
               16-384
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               225, 21
               

               Conread position:
               17-231
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               25, 101
               

               Conread position:
               17-245
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               27, 101
               

               Conread position:
               17-370
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 135
               

               Conread position:
               17-384
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 101
               

               Conread position:
               19-138
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               23, 97
               

               Conread position:
               19-283
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 34
               

               Conread position:
               19-378
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 99
               

               Conread position:
               19-378
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               14, 35
               

               Conread position:
               19-383
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 99
               

               Conread position:
               19-384
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               24, 76
               

               Conread position:
               27-224
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 92
               

               Conread position:
               27-380
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               263
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               28, 77
               

               Conread position:
               27-381
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-381
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 99
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               28, 97
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 79
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 99
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 99
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               29-382
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               251
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               21, 97
               

               Conread position:
               30-382
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               55, 8
               

               Conread position:
               47-381
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               208, 31
               

               Conread position:
               49-382
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               34, 62
               

               Conread position:
               50-383
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 74
               

               Conread position:
               50-384
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 73
               

               Conread position:
               50-384
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               190, 37
               

               Conread position:
               50-384
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 53
               

               Conread position:
               50-384
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 73
               

               Conread position:
               67-371
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 56
               

               Conread position:
               154-384
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               9, 121
               

               Conread position:
               154-384
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               9, 135
               

               Conread position:
               161-331
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               64, 130
               

               Conread position:
               161-378
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               70, 130
               

               Conread position:
               161-382
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               70, 131
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               70, 130
               

               Conread position:
               203-384
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               141, 37
               

               Conread position:
               208-384
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               26, 83
               
Show alignments to all cow chromosomes.