Cow genome map

Conread name: rspc031_h17.y1

Conread position: 1-375
Cow position:
Alignm length: 387
Alignm identity: 266
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 41, 20

Conread position: 2-329
Cow position:
Alignm length: 334
Alignm identity: 237
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 17, 9

Conread position: 2-370
Cow position:
Alignm length: 377
Alignm identity: 251
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 238, 12

Conread position: 2-378
Cow position:
Alignm length: 386
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 10

Conread position: 2-384
Cow position:
Alignm length: 386
Alignm identity: 263
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 17, 30

Conread position: 2-384
Cow position:
Alignm length: 391
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 57

Conread position: 2-384
Cow position:
Alignm length: 392
Alignm identity: 274
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 8

Conread position: 2-384
Cow position:
Alignm length: 415
Alignm identity: 273
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 19, 5

Conread position: 3-365
Cow position:
Alignm length: 375
Alignm identity: 261
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 16, 128

Conread position: 3-375
Cow position:
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 151

Conread position: 3-378
Cow position:
Alignm length: 384
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 116

Conread position: 3-380
Cow position:
Alignm length: 392
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 124

Conread position: 3-381
Cow position:
Alignm length: 397
Alignm identity: 270
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 17, 124

Conread position: 3-381
Cow position:
Alignm length: 388
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 122

Conread position: 3-384
Cow position:
Alignm length: 389
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 67

Conread position: 3-384
Cow position:
Alignm length: 411
Alignm identity: 284
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 18, 123

Conread position: 3-384
Cow position:
Alignm length: 416
Alignm identity: 277
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 18, 211

Conread position: 3-384
Cow position:
Alignm length: 391
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 109

Conread position: 3-384
Cow position:
Alignm length: 417
Alignm identity: 286
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 18, 315

Conread position: 4-329
Cow position:
Alignm length: 334
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 122

Conread position: 5-381
Cow position:
Alignm length: 384
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 109

Conread position: 5-384
Cow position:
Alignm length: 390
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 116

Conread position: 8-384
Cow position:
Alignm length: 381
Alignm identity: 241
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 12, 42

Conread position: 10-384
Cow position:
Alignm length: 386
Alignm identity: 260
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 30, 9

Conread position: 11-382
Cow position:
Alignm length: 379
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 107

Conread position: 11-384
Cow position:
Alignm length: 382
Alignm identity: 269
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 8, 109

Conread position: 12-245
Cow position:
Alignm length: 239
Alignm identity: 171
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 8, 107

Conread position: 12-377
Cow position:
Alignm length: 376
Alignm identity: 254
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 10, 44

Conread position: 12-378
Cow position:
Alignm length: 389
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 78

Conread position: 17-237
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 27, 76

Conread position: 17-272
Cow position:
Alignm length: 263
Alignm identity: 191
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 27, 101

Conread position: 17-376
Cow position:
Alignm length: 366
Alignm identity: 257
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 27, 101

Conread position: 17-383
Cow position:
Alignm length: 373
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 101

Conread position: 17-384
Cow position:
Alignm length: 371
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 101

Conread position: 17-384
Cow position:
Alignm length: 374
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 91

Conread position: 17-384
Cow position:
Alignm length: 371
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 101

Conread position: 17-384
Cow position:
Alignm length: 371
Alignm identity: 260
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 27, 71

Conread position: 17-384
Cow position:
Alignm length: 380
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 109

Conread position: 18-382
Cow position:
Alignm length: 369
Alignm identity: 254
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 32, 107

Conread position: 19-258
Cow position:
Alignm length: 247
Alignm identity: 174
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 41

Conread position: 19-378
Cow position:
Alignm length: 367
Alignm identity: 259
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 25, 89

Conread position: 19-384
Cow position:
Alignm length: 369
Alignm identity: 261
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 25, 99

Conread position: 19-384
Cow position:
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 97

Conread position: 19-384
Cow position:
Alignm length: 375
Alignm identity: 258
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 23, 43

Conread position: 19-384
Cow position:
Alignm length: 378
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 99

Conread position: 20-384
Cow position:
Alignm length: 374
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 105

Conread position: 21-384
Cow position:
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 105

Conread position: 22-246
Cow position:
Alignm length: 231
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 97

Conread position: 23-384
Cow position:
Alignm length: 395
Alignm identity: 270
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 28, 45

Conread position: 25-381
Cow position:
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 100

Conread position: 27-198
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 13, 106

Conread position: 27-305
Cow position:
Alignm length: 287
Alignm identity: 208
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 23, 98

Conread position: 27-332
Cow position:
Alignm length: 312
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 98

Conread position: 27-372
Cow position:
Alignm length: 355
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 98

Conread position: 27-375
Cow position:
Alignm length: 358
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 99

Conread position: 27-381
Cow position:
Alignm length: 382
Alignm identity: 268
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 23, 284

Conread position: 27-381
Cow position:
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 98

Conread position: 27-382
Cow position:
Alignm length: 375
Alignm identity: 264
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 15, 60

Conread position: 27-383
Cow position:
Alignm length: 360
Alignm identity: 256
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 23, 81

Conread position: 27-384
Cow position:
Alignm length: 367
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 42

Conread position: 27-384
Cow position:
Alignm length: 367
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 99

Conread position: 27-384
Cow position:
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 87

Conread position: 27-384
Cow position:
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 70

Conread position: 27-384
Cow position:
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 99

Conread position: 27-384
Cow position:
Alignm length: 363
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 98

Conread position: 27-384
Cow position:
Alignm length: 361
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 99

Conread position: 27-384
Cow position:
Alignm length: 367
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 98

Conread position: 27-384
Cow position:
Alignm length: 365
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 98

Conread position: 42-378
Cow position:
Alignm length: 343
Alignm identity: 224
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 108, 72

Conread position: 43-245
Cow position:
Alignm length: 206
Alignm identity: 160
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 101, 64

Conread position: 50-384
Cow position:
Alignm length: 358
Alignm identity: 253
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 102, 60

Conread position: 50-384
Cow position:
Alignm length: 342
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 73

Conread position: 50-384
Cow position:
Alignm length: 346
Alignm identity: 242
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 97, 67

Conread position: 50-384
Cow position:
Alignm length: 339
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 73

Conread position: 53-268
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 184, 70

Conread position: 53-383
Cow position:
Alignm length: 348
Alignm identity: 244
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 43, 71

Conread position: 54-384
Cow position:
Alignm length: 332
Alignm identity: 230
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 288, 42

Conread position: 58-380
Cow position:
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 73

Conread position: 62-384
Cow position:
Alignm length: 329
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 62

Conread position: 103-384
Cow position:
Alignm length: 291
Alignm identity: 210
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 17, 80

Conread position: 107-380
Cow position:
Alignm length: 281
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 17

Conread position: 113-384
Cow position:
Alignm length: 276
Alignm identity: 185
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 75, 27

Conread position: 118-384
Cow position:
Alignm length: 273
Alignm identity: 177
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 113, 29

Conread position: 140-384
Cow position:
Alignm length: 254
Alignm identity: 177
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 88, 46

Conread position: 154-378
Cow position:
Alignm length: 235
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 127

Conread position: 154-384
Cow position:
Alignm length: 240
Alignm identity: 165
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 135

Conread position: 154-384
Cow position:
Alignm length: 241
Alignm identity: 165
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 135

Conread position: 158-384
Cow position:
Alignm length: 237
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 136

Conread position: 158-384
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 132

Conread position: 161-380
Cow position:
Alignm length: 228
Alignm identity: 164
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 60, 131

Conread position: 161-380
Cow position:
Alignm length: 227
Alignm identity: 162
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 70, 130

Conread position: 161-381
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 130

Conread position: 161-382
Cow position:
Alignm length: 229
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 130

Conread position: 161-384
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 70, 129

Conread position: 161-384
Cow position:
Alignm length: 231
Alignm identity: 163
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 70, 131

Conread position: 161-384
Cow position:
Alignm length: 231
Alignm identity: 156
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 130

Conread position: 161-384
Cow position:
Alignm length: 230
Alignm identity: 162
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 67, 127

Conread position: 161-384
Cow position:
Alignm length: 232
Alignm identity: 165
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 70, 131

Conread position: 161-384
Cow position:
Alignm length: 233
Alignm identity: 168
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 70, 131

Conread position: 169-382
Cow position:
Alignm length: 221
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 34

Conread position: 184-384
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 47, 103

Conread position: 186-381
Cow position:
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 105

Conread position: 189-384
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 39, 98

Conread position: 193-377
Cow position:
Alignm length: 186
Alignm identity: 145
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 147, 90

Conread position: 236-384
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 106, 48

Conread position: 251-384
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 91, 33

Conread position: 254-384
Cow position:
Alignm length: 132
Alignm identity: 110
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 88, 31

Conread position: 258-371
Cow position:
Alignm length: 115
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 84, 27

Conread position: 260-384
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 82, 25

Show alignments to all cow chromosomes.