Cow genome map


           Conread name:
           rspc031_h17.y1
        

               Conread position:
               2-245
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               2-375
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 115
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 88
               

               Conread position:
               3-237
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               186
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               39, 16
               

               Conread position:
               3-377
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 107
               

               Conread position:
               3-378
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               18, 313
               

               Conread position:
               3-379
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               276
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               47, 52
               

               Conread position:
               3-381
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 126
               

               Conread position:
               3-381
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 128
               

               Conread position:
               3-381
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               48, 122
               

               Conread position:
               3-382
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               48, 121
               

               Conread position:
               3-383
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 126
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               18, 310
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 33
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 22
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 125
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 136
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 106
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 57
               

               Conread position:
               7-191
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               15, 74
               

               Conread position:
               7-384
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 121
               

               Conread position:
               10-384
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 15
               

               Conread position:
               11-382
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 114
               

               Conread position:
               16-384
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 108
               

               Conread position:
               17-382
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               27, 101
               

               Conread position:
               17-384
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 101
               

               Conread position:
               19-383
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               23, 106
               

               Conread position:
               20-382
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               19, 97
               

               Conread position:
               20-384
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 105
               

               Conread position:
               22-305
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               18, 61
               

               Conread position:
               27-220
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               28, 125
               

               Conread position:
               27-297
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               23, 53
               

               Conread position:
               27-381
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               251
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-381
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 89
               

               Conread position:
               27-383
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 79
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 8
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 78
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               254
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               23, 125
               

               Conread position:
               28-223
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               29-384
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 96
               

               Conread position:
               30-372
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               119, 11
               

               Conread position:
               37-381
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 88
               

               Conread position:
               38-272
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               112, 78
               

               Conread position:
               38-384
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 86
               

               Conread position:
               38-384
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 87
               

               Conread position:
               44-373
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 73
               

               Conread position:
               50-271
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               186, 73
               

               Conread position:
               50-381
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 73
               

               Conread position:
               50-384
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               238
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               100, 73
               

               Conread position:
               50-384
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               100, 42
               

               Conread position:
               50-384
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               186, 70
               

               Conread position:
               50-384
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               186, 70
               

               Conread position:
               58-384
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 59
               

               Conread position:
               59-332
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               181, 65
               

               Conread position:
               102-375
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               48, 22
               

               Conread position:
               118-383
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               67, 29
               

               Conread position:
               151-383
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               62, 41
               

               Conread position:
               154-380
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               9, 135
               

               Conread position:
               154-384
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               9, 135
               

               Conread position:
               154-384
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 125
               

               Conread position:
               158-384
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               12, 139
               

               Conread position:
               158-384
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               12, 136
               

               Conread position:
               161-308
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               76, 118
               

               Conread position:
               161-370
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               179, 74
               

               Conread position:
               161-378
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               70, 197
               

               Conread position:
               161-380
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 131
               

               Conread position:
               161-380
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               70, 18
               

               Conread position:
               161-381
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               68, 77
               

               Conread position:
               161-383
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               70, 101
               

               Conread position:
               161-383
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               64, 137
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               70, 130
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               70, 126
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               70, 35
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               70, 130
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               60, 130
               

               Conread position:
               169-384
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               84, 7
               

               Conread position:
               169-384
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               52, 120
               

               Conread position:
               182-384
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               49, 109
               

               Conread position:
               184-381
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               158, 54
               

               Conread position:
               187-384
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 34
               

               Conread position:
               203-370
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               27, 17
               

               Conread position:
               206-384
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               25, 81
               

               Conread position:
               214-383
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               23, 73
               

               Conread position:
               215-381
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 76
               

               Conread position:
               215-384
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               25, 77
               

               Conread position:
               221-378
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 65
               

               Conread position:
               232-384
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               12, 55
               
Show alignments to all cow chromosomes.