Cow genome map

Conread name: rspc031_h17.y1

Conread position: 2-172
Cow position: chr7:26890140-26890316 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 117

Conread position: 2-235
Cow position: chr7:993661-993893 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 28, 117

Conread position: 2-300
Cow position: chr7:67416463-67416748 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 213
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 9

Conread position: 2-372
Cow position: chr7:29371363-29370995 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 84

Conread position: 2-372
Cow position: chr7:52120683-52120320 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 256
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 17, 9

Conread position: 2-376
Cow position: chr7:67425772-67426149 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 81

Conread position: 2-384
Cow position: chr7:21242713-21242330 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 88

Conread position: 3-201
Cow position: chr7:68858936-68858735 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 16, 28

Conread position: 3-320
Cow position: chr7:760146-759829 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 232
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 16, 126

Conread position: 3-331
Cow position: chr7:7255650-7256009 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 314

Conread position: 3-331
Cow position: chr7:10432002-10431668 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 246
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 16, 130

Conread position: 3-374
Cow position: chr7:51013363-51013736 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 116

Conread position: 3-375
Cow position: chr7:53990154-53990523 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 16

Conread position: 3-378
Cow position: chr7:21309593-21309983 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 73

Conread position: 3-380
Cow position: chr7:64242547-64242169 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 127

Conread position: 3-381
Cow position: chr7:11467367-11466962 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 271
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 18, 312

Conread position: 3-381
Cow position: chr7:21235620-21235243 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 124

Conread position: 3-384
Cow position: chr7:3154170-3154553 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 55

Conread position: 3-384
Cow position: chr7:14140205-14139825 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 127

Conread position: 3-384
Cow position: chr7:30156905-30156517 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 16

Conread position: 3-384
Cow position: chr7:34148499-34148881 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 124

Conread position: 3-384
Cow position: chr7:48632795-48633177 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 93

Conread position: 3-384
Cow position: chr7:55538535-55538145 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 288
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 16, 134

Conread position: 4-342
Cow position: chr7:33406811-33406481 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 252
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 15, 98

Conread position: 5-148
Cow position: chr7:27537005-27536860 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 14, 115

Conread position: 6-210
Cow position: chr7:35288227-35288021 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 165
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 13, 82

Conread position: 10-382
Cow position: chr7:41870491-41870159 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 259
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 7

Conread position: 10-382
Cow position: chr7:49289981-49290365 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 272
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 8, 81

Conread position: 13-384
Cow position: chr7:41489546-41489906 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 106

Conread position: 16-375
Cow position: chr7:60857947-60857586 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 258
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 27, 71

Conread position: 17-307
Cow position: chr7:24421372-24421663 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 213
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 22, 163

Conread position: 17-346
Cow position: chr7:67653355-67653678 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 225
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 23, 77

Conread position: 17-377
Cow position: chr7:68779452-68779093 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 100

Conread position: 19-369
Cow position: chr7:26883551-26883900 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 255
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 24, 81

Conread position: 20-382
Cow position: chr7:25438917-25439302 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 262
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 105

Conread position: 21-180
Cow position: chr7:21251809-21251646 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 25, 98

Conread position: 21-381
Cow position: chr7:27143747-27144110 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 103

Conread position: 21-382
Cow position: chr7:47049842-47050193 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 255
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 21, 44

Conread position: 21-384
Cow position: chr7:1448902-1449266 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 96

Conread position: 23-376
Cow position: chr7:447206-446861 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 12

Conread position: 27-381
Cow position: chr7:21128227-21127882 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 99

Conread position: 27-382
Cow position: chr7:38396642-38396996 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 99

Conread position: 27-384
Cow position: chr7:1373232-1372878 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 98

Conread position: 27-384
Cow position: chr7:13538311-13537956 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 78

Conread position: 27-384
Cow position: chr7:24809051-24808697 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 99

Conread position: 27-384
Cow position: chr7:54602266-54602622 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 98

Conread position: 29-384
Cow position: chr7:34485330-34485681 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 76

Conread position: 31-384
Cow position: chr7:21984823-21985171 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 7

Conread position: 32-382
Cow position: chr7:20107115-20106774 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 242
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 117, 6

Conread position: 38-148
Cow position: chr7:38535980-38536089 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 38-320
Cow position: chr7:3729499-3729773 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 49, 80

Conread position: 38-384
Cow position: chr7:53014923-53015267 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 248
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 51, 78

Conread position: 43-381
Cow position: chr7:1358231-1357905 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 74

Conread position: 44-329
Cow position: chr7:1611967-1611687 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 105, 79

Conread position: 48-275
Cow position: chr7:54196297-54196073 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 116, 36

Conread position: 49-238
Cow position: chr7:68436576-68436385 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 98, 61

Conread position: 50-278
Cow position: chr7:19927136-19926912 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 187, 73

Conread position: 50-384
Cow position: chr7:27786074-27786403 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 67

Conread position: 50-384
Cow position: chr7:39791178-39791508 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 238
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 184, 73

Conread position: 50-384
Cow position: chr7:67798298-67798623 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 244
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 190, 73

Conread position: 52-279
Cow position: chr7:64394954-64395173 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 94, 29

Conread position: 58-384
Cow position: chr7:8145788-8145466 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 65

Conread position: 61-384
Cow position: chr7:46902619-46902305 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 179, 15

Conread position: 107-384
Cow position: chr7:29469360-29469637 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 16

Conread position: 118-382
Cow position: chr7:1736667-1736409 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 23, 75

Conread position: 118-383
Cow position: chr7:39109209-39108944 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 174

Conread position: 118-384
Cow position: chr7:63384854-63385125 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 120, 29

Conread position: 129-372
Cow position: chr7:20294396-20294630 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 211, 21

Conread position: 133-384
Cow position: chr7:47374512-47374768 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 98, 14

Conread position: 134-382
Cow position: chr7:38536031-38536289 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 25, 6

Conread position: 154-382
Cow position: chr7:61558747-61558981 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 9, 129

Conread position: 161-373
Cow position: chr7:20799873-20799659 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 72, 25

Conread position: 161-374
Cow position: chr7:27102568-27102349 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 70, 118

Conread position: 161-377
Cow position: chr7:6649111-6648892 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 72, 131

Conread position: 161-382
Cow position: chr7:3235140-3234915 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 70, 97

Conread position: 161-382
Cow position: chr7:3301612-3301386 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 68, 132

Conread position: 161-384
Cow position: chr7:17328-17101 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 64, 128

Conread position: 161-384
Cow position: chr7:6643330-6643101 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 70, 130

Conread position: 161-384
Cow position: chr7:20555239-20555467 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 67, 130

Conread position: 169-384
Cow position: chr7:20529145-20528925 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 121

Conread position: 172-384
Cow position: chr7:6720101-6720319 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 59, 119

Conread position: 208-383
Cow position: chr7:62680062-62679885 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 79

Conread position: 208-384
Cow position: chr7:36084926-36085103 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 5, 80

Conread position: 213-384
Cow position: chr7:522242-522073 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 31, 49

Conread position: 215-381
Cow position: chr7:68858486-68858324 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 136
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 129, 24

Conread position: 215-384
Cow position: chr7:1400752-1400583 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 127, 70

Conread position: 215-384
Cow position: chr7:35287966-35287786 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 82

Conread position: 223-384
Cow position: chr7:26890415-26890578 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 135
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 14, 65

Conread position: 232-378
Cow position: chr7:68907230-68907376 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 111, 52

Conread position: 232-384
Cow position: chr7:35297972-35297823 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 104, 15

Conread position: 243-381
Cow position: chr7:19925181-19925043 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 99, 42

Conread position: 258-384
Cow position: chr7:67416690-67416814 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 69, 24

Conread position: 264-384
Cow position: chr7:21976084-21975964 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 21

Show alignments to all cow chromosomes.