Cow genome map


           Conread name:
           rspc031_h17.y1
        

               Conread position:
               2-172
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               17, 117
               

               Conread position:
               2-235
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               28, 117
               

               Conread position:
               2-300
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               2-372
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 84
               

               Conread position:
               2-372
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               256
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               2-376
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 81
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 88
               

               Conread position:
               3-201
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               16, 28
               

               Conread position:
               3-320
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               16, 126
               

               Conread position:
               3-331
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               14, 314
               

               Conread position:
               3-331
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               16, 130
               

               Conread position:
               3-374
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 116
               

               Conread position:
               3-375
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 16
               

               Conread position:
               3-378
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 73
               

               Conread position:
               3-380
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 127
               

               Conread position:
               3-381
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               271
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               18, 312
               

               Conread position:
               3-381
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 124
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 55
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 127
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 16
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 124
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 93
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               288
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               16, 134
               

               Conread position:
               4-342
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               252
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               15, 98
               

               Conread position:
               5-148
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               14, 115
               

               Conread position:
               6-210
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               13, 82
               

               Conread position:
               10-382
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               10-382
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               272
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               8, 81
               

               Conread position:
               13-384
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 106
               

               Conread position:
               16-375
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               258
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               27, 71
               

               Conread position:
               17-307
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               22, 163
               

               Conread position:
               17-346
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               23, 77
               

               Conread position:
               17-377
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 100
               

               Conread position:
               19-369
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               255
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               24, 81
               

               Conread position:
               20-382
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               31, 105
               

               Conread position:
               21-180
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               25, 98
               

               Conread position:
               21-381
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 103
               

               Conread position:
               21-382
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               255
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               21, 44
               

               Conread position:
               21-384
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 96
               

               Conread position:
               23-376
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 12
               

               Conread position:
               27-381
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 99
               

               Conread position:
               27-382
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 99
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 78
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 99
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 98
               

               Conread position:
               29-384
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 76
               

               Conread position:
               31-384
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 7
               

               Conread position:
               32-382
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               117, 6
               

               Conread position:
               38-148
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               38-320
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               49, 80
               

               Conread position:
               38-384
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               51, 78
               

               Conread position:
               43-381
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 74
               

               Conread position:
               44-329
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               105, 79
               

               Conread position:
               48-275
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               116, 36
               

               Conread position:
               49-238
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               98, 61
               

               Conread position:
               50-278
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               187, 73
               

               Conread position:
               50-384
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 67
               

               Conread position:
               50-384
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               238
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               184, 73
               

               Conread position:
               50-384
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               244
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               190, 73
               

               Conread position:
               52-279
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               94, 29
               

               Conread position:
               58-384
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 65
               

               Conread position:
               61-384
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               179, 15
               

               Conread position:
               107-384
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 16
               

               Conread position:
               118-382
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               23, 75
               

               Conread position:
               118-383
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 174
               

               Conread position:
               118-384
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               120, 29
               

               Conread position:
               129-372
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               211, 21
               

               Conread position:
               133-384
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               98, 14
               

               Conread position:
               134-382
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               25, 6
               

               Conread position:
               154-382
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               9, 129
               

               Conread position:
               161-373
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               72, 25
               

               Conread position:
               161-374
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               70, 118
               

               Conread position:
               161-377
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               72, 131
               

               Conread position:
               161-382
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               70, 97
               

               Conread position:
               161-382
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               68, 132
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               64, 128
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               70, 130
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               67, 130
               

               Conread position:
               169-384
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               49, 121
               

               Conread position:
               172-384
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               59, 119
               

               Conread position:
               208-383
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               15, 79
               

               Conread position:
               208-384
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               5, 80
               

               Conread position:
               213-384
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               31, 49
               

               Conread position:
               215-381
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               129, 24
               

               Conread position:
               215-384
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               127, 70
               

               Conread position:
               215-384
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               24, 82
               

               Conread position:
               223-384
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               14, 65
               

               Conread position:
               232-378
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               111, 52
               

               Conread position:
               232-384
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               104, 15
               

               Conread position:
               243-381
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               99, 42
               

               Conread position:
               258-384
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               69, 24
               

               Conread position:
               264-384
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 21
               
Show alignments to all cow chromosomes.