Cow genome map
Conread name: | rspc031_h17.y1 |
Conread position: | 1-375 |
Cow position: | chr9:6756805-6757172 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 257 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 38, 18 |
Conread position: | 2-262 |
Cow position: | chr9:3155307-3155554 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 185 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 17, 9 |
Conread position: | 2-381 |
Cow position: | chr9:37130285-37129927 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 260 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 17, 10 |
Conread position: | 2-384 |
Cow position: | chr9:31020039-31020417 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 271 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 17, 247 |
Conread position: | 2-384 |
Cow position: | chr9:59456366-59455988 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 116 |
Conread position: | 2-384 |
Cow position: | chr9:59483433-59483058 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 124 |
Conread position: | 3-239 |
Cow position: | chr9:4531423-4531655 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 170 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 27, 126 |
Conread position: | 3-247 |
Cow position: | chr9:6249378-6249617 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 177 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 16, 106 |
Conread position: | 3-283 |
Cow position: | chr9:59443059-59443344 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 55 |
Conread position: | 3-384 |
Cow position: | chr9:9012338-9012720 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 78 |
Conread position: | 3-384 |
Cow position: | chr9:10321054-10321433 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 128 |
Conread position: | 3-384 |
Cow position: | chr9:12401452-12401855 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 265 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 18, 96 |
Conread position: | 3-384 |
Cow position: | chr9:16174997-16175379 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 125 |
Conread position: | 3-384 |
Cow position: | chr9:18510494-18510113 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 125 |
Conread position: | 3-384 |
Cow position: | chr9:37971981-37971596 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 127 |
Conread position: | 3-384 |
Cow position: | chr9:45872553-45872965 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 272 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 18, 314 |
Conread position: | 6-384 |
Cow position: | chr9:832209-831820 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 170 |
Conread position: | 10-316 |
Cow position: | chr9:3802754-3803060 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 225 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 10, 74 |
Conread position: | 10-373 |
Cow position: | chr9:64118108-64118444 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 258 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 31, 14 |
Conread position: | 10-384 |
Cow position: | chr9:5003249-5003624 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 266 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 9, 118 |
Conread position: | 12-380 |
Cow position: | chr9:4984021-4984387 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 250 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 30, 75 |
Conread position: | 17-220 |
Cow position: | chr9:10314649-10314855 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 156 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 27, 101 |
Conread position: | 17-383 |
Cow position: | chr9:28626757-28626418 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 101 |
Conread position: | 17-384 |
Cow position: | chr9:8969788-8969432 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 101 |
Conread position: | 17-384 |
Cow position: | chr9:15071780-15072126 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 263 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 27, 95 |
Conread position: | 17-384 |
Cow position: | chr9:54359852-54360218 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 101 |
Conread position: | 19-262 |
Cow position: | chr9:13219612-13219857 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 169 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 21, 100 |
Conread position: | 19-277 |
Cow position: | chr9:34107607-34107348 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 195 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 26, 106 |
Conread position: | 19-369 |
Cow position: | chr9:20310468-20310119 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 247 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 41, 93 |
Conread position: | 25-384 |
Cow position: | chr9:2170312-2170669 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 94 |
Conread position: | 27-287 |
Cow position: | chr9:22650180-22650438 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 190 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 15, 98 |
Conread position: | 27-375 |
Cow position: | chr9:7001811-7002156 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 99 |
Conread position: | 27-376 |
Cow position: | chr9:6831285-6830941 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 96 |
Conread position: | 27-378 |
Cow position: | chr9:2488735-2488359 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 259 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 24, 98 |
Conread position: | 27-381 |
Cow position: | chr9:28020803-28021155 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 92 |
Conread position: | 27-384 |
Cow position: | chr9:418271-417920 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 253 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 28, 98 |
Conread position: | 27-384 |
Cow position: | chr9:6051781-6051429 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 251 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 23, 98 |
Conread position: | 27-384 |
Cow position: | chr9:10855455-10855811 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 98 |
Conread position: | 27-384 |
Cow position: | chr9:29629491-29629136 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 98 |
Conread position: | 27-384 |
Cow position: | chr9:30671627-30671981 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 99 |
Conread position: | 27-384 |
Cow position: | chr9:31806795-31807151 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 122 |
Conread position: | 27-384 |
Cow position: | chr9:37163549-37163197 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 68 |
Conread position: | 27-384 |
Cow position: | chr9:42308938-42309294 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 98 |
Conread position: | 27-384 |
Cow position: | chr9:42568129-42568484 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 98 |
Conread position: | 27-384 |
Cow position: | chr9:47001469-47001817 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 98 |
Conread position: | 27-384 |
Cow position: | chr9:51183452-51183097 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 98 |
Conread position: | 38-234 |
Cow position: | chr9:7062871-7062686 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 140 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 38-378 |
Cow position: | chr9:52289899-52290243 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 236 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 112, 79 |
Conread position: | 38-384 |
Cow position: | chr9:793203-792896 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 239 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 304, 43 |
Conread position: | 38-384 |
Cow position: | chr9:59174888-59174546 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 250 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 8, 16 |
Conread position: | 41-384 |
Cow position: | chr9:27033981-27034319 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 109 |
Conread position: | 43-383 |
Cow position: | chr9:651805-651483 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 240 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 17, 115 |
Conread position: | 43-384 |
Cow position: | chr9:34990942-34991260 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 250 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 57, 49 |
Conread position: | 50-384 |
Cow position: | chr9:1996627-1996309 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 245 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 185, 41 |
Conread position: | 50-384 |
Cow position: | chr9:2199397-2199722 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 235 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 174, 74 |
Conread position: | 50-384 |
Cow position: | chr9:3548889-3548559 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 73 |
Conread position: | 50-384 |
Cow position: | chr9:59535386-59535710 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 74 |
Conread position: | 96-384 |
Cow position: | chr9:164176-163879 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 176 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 60, 194 |
Conread position: | 151-384 |
Cow position: | chr9:2500927-2500684 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 175 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 6, 142 |
Conread position: | 154-384 |
Cow position: | chr9:16267734-16267971 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 167 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 13, 135 |
Conread position: | 158-380 |
Cow position: | chr9:50788947-50789178 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 169 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 12, 136 |
Conread position: | 161-329 |
Cow position: | chr9:17065004-17064832 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 132 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 70, 97 |
Conread position: | 161-342 |
Cow position: | chr9:3006890-3006704 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 133 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 76, 130 |
Conread position: | 161-384 |
Cow position: | chr9:781417-781190 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 158 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 70, 124 |
Conread position: | 161-384 |
Cow position: | chr9:4671991-4672218 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 169 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 67, 129 |
Conread position: | 161-384 |
Cow position: | chr9:25483254-25483480 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 163 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 70, 126 |
Conread position: | 161-384 |
Cow position: | chr9:25755824-25755592 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 160 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 74, 134 |
Conread position: | 161-384 |
Cow position: | chr9:27933476-27933705 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 169 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 70, 130 |
Conread position: | 161-384 |
Cow position: | chr9:31194785-31194556 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 162 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 70, 130 |
Conread position: | 161-384 |
Cow position: | chr9:33834889-33834662 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 163 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 67, 128 |
Conread position: | 161-384 |
Cow position: | chr9:34243216-34242987 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 165 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 70, 130 |
Conread position: | 161-384 |
Cow position: | chr9:46626415-46626188 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 167 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 57, 128 |
Conread position: | 169-384 |
Cow position: | chr9:1076807-1076588 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 159 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 62, 122 |
Conread position: | 193-382 |
Cow position: | chr9:10314800-10314989 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 138 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 41, 11 |
Conread position: | 204-373 |
Cow position: | chr9:2051885-2052056 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 134 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 30, 87 |
Conread position: | 215-384 |
Cow position: | chr9:4531930-4532102 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 129 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 22, 76 |
Conread position: | 215-384 |
Cow position: | chr9:60278587-60278411 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 137 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 22, 78 |
Conread position: | 236-383 |
Cow position: | chr9:59443318-59443465 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 110 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 106, 49 |
Conread position: | 252-384 |
Cow position: | chr9:7062627-7062495 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 107 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 90, 33 |
Show alignments to all cow chromosomes.