Cow genome map
| Conread name: | rspc031_h17.y1 |
| Conread position: | 1-384 |
| Cow position: | chrX:21489340-21489750 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 119 |
| Conread position: | 1-384 |
| Cow position: | chrX:40057912-40057545 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 11 |
| Conread position: | 2-174 |
| Cow position: | chrX:6910596-6910419 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 2-241 |
| Cow position: | chrX:30144362-30144120 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 17, 116 |
| Conread position: | 2-372 |
| Cow position: | chrX:21271028-21270661 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 259 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 2-378 |
| Cow position: | chrX:25332230-25332611 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 17, 118 |
| Conread position: | 2-381 |
| Cow position: | chrX:24122767-24122404 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 2-384 |
| Cow position: | chrX:16364020-16363606 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 19, 316 |
| Conread position: | 2-384 |
| Cow position: | chrX:22894231-22893844 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 31, 6 |
| Conread position: | 2-384 |
| Cow position: | chrX:24137238-24136878 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 268 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 17, 10 |
| Conread position: | 2-384 |
| Cow position: | chrX:30046969-30046598 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 10 |
| Conread position: | 3-186 |
| Cow position: | chrX:30190275-30190088 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 16, 116 |
| Conread position: | 3-239 |
| Cow position: | chrX:23042461-23042233 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 33 |
| Conread position: | 3-339 |
| Cow position: | chrX:318222-318558 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 106 |
| Conread position: | 3-372 |
| Cow position: | chrX:13032320-13031924 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 81 |
| Conread position: | 3-381 |
| Cow position: | chrX:23392466-23392088 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 126 |
| Conread position: | 3-381 |
| Cow position: | chrX:25186796-25187173 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 125 |
| Conread position: | 3-381 |
| Cow position: | chrX:26527112-26527489 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 125 |
| Conread position: | 3-382 |
| Cow position: | chrX:3085795-3085388 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 18, 315 |
| Conread position: | 3-382 |
| Cow position: | chrX:12704808-12704398 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 18, 313 |
| Conread position: | 3-382 |
| Cow position: | chrX:16236459-16236837 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 59 |
| Conread position: | 3-382 |
| Cow position: | chrX:21586154-21586551 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 125 |
| Conread position: | 3-382 |
| Cow position: | chrX:28759518-28759108 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 18, 316 |
| Conread position: | 3-382 |
| Cow position: | chrX:31188130-31187720 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 14, 296 |
| Conread position: | 3-383 |
| Cow position: | chrX:9007452-9007859 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 17, 97 |
| Conread position: | 3-384 |
| Cow position: | chrX:1832979-1833355 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 255 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 22, 123 |
| Conread position: | 3-384 |
| Cow position: | chrX:16017986-16017606 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 56 |
| Conread position: | 3-384 |
| Cow position: | chrX:24485308-24484900 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 278 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 15, 302 |
| Conread position: | 3-384 |
| Cow position: | chrX:28553157-28553540 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 3-384 |
| Cow position: | chrX:29283869-29284252 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 124 |
| Conread position: | 3-384 |
| Cow position: | chrX:38145196-38145577 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 126 |
| Conread position: | 5-383 |
| Cow position: | chrX:6887193-6886838 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 14, 64 |
| Conread position: | 5-384 |
| Cow position: | chrX:22620199-22619797 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 271 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 16, 47 |
| Conread position: | 6-384 |
| Cow position: | chrX:2483494-2483123 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 259 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 36, 120 |
| Conread position: | 7-369 |
| Cow position: | chrX:22583813-22583418 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 15, 102 |
| Conread position: | 7-375 |
| Cow position: | chrX:19927457-19927822 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 39, 11 |
| Conread position: | 7-382 |
| Cow position: | chrX:28522576-28522183 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 266 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 14, 297 |
| Conread position: | 12-380 |
| Cow position: | chrX:26629160-26628802 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 13, 107 |
| Conread position: | 12-384 |
| Cow position: | chrX:8478826-8479222 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 272 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 9, 90 |
| Conread position: | 12-384 |
| Cow position: | chrX:21602046-21602405 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 64 |
| Conread position: | 17-214 |
| Cow position: | chrX:31034847-31035047 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 160 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 25, 102 |
| Conread position: | 17-237 |
| Cow position: | chrX:21633403-21633195 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 27, 7 |
| Conread position: | 17-342 |
| Cow position: | chrX:29794952-29794630 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 23 |
| Conread position: | 17-381 |
| Cow position: | chrX:11534645-11535000 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 228 |
| Conread position: | 17-384 |
| Cow position: | chrX:18532133-18532522 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 272 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 25, 58 |
| Conread position: | 18-384 |
| Cow position: | chrX:2788061-2787696 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 24, 76 |
| Conread position: | 19-180 |
| Cow position: | chrX:31372109-31372274 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 24, 100 |
| Conread position: | 19-276 |
| Cow position: | chrX:17669249-17668995 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 23, 70 |
| Conread position: | 19-283 |
| Cow position: | chrX:13051841-13052101 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 128, 19 |
| Conread position: | 19-377 |
| Cow position: | chrX:28549053-28549412 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 100 |
| Conread position: | 19-379 |
| Cow position: | chrX:22131545-22131175 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 99 |
| Conread position: | 19-384 |
| Cow position: | chrX:34987818-34988161 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 15, 56 |
| Conread position: | 19-384 |
| Cow position: | chrX:35016994-35017344 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 99 |
| Conread position: | 20-381 |
| Cow position: | chrX:30232949-30232590 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 260 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 26, 70 |
| Conread position: | 27-276 |
| Cow position: | chrX:31197797-31198042 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 53 |
| Conread position: | 27-372 |
| Cow position: | chrX:26759428-26759086 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 62 |
| Conread position: | 27-375 |
| Cow position: | chrX:969939-970282 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 251 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 23, 95 |
| Conread position: | 27-376 |
| Cow position: | chrX:32095788-32095445 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 97 |
| Conread position: | 27-380 |
| Cow position: | chrX:15128078-15127730 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 72 |
| Conread position: | 27-381 |
| Cow position: | chrX:1546096-1546448 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 27-381 |
| Cow position: | chrX:21222109-21222441 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 247 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 27-381 |
| Cow position: | chrX:23456406-23456057 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 98 |
| Conread position: | 27-384 |
| Cow position: | chrX:15598092-15598446 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 66 |
| Conread position: | 27-384 |
| Cow position: | chrX:16698461-16698818 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 126 |
| Conread position: | 27-384 |
| Cow position: | chrX:29854402-29854047 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 27-384 |
| Cow position: | chrX:32466412-32466771 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 90 |
| Conread position: | 27-384 |
| Cow position: | chrX:41151389-41151744 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 79 |
| Conread position: | 30-384 |
| Cow position: | chrX:26768029-26767676 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 8 |
| Conread position: | 38-236 |
| Cow position: | chrX:6284048-6283852 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 112, 40 |
| Conread position: | 38-245 |
| Cow position: | chrX:27985115-27984917 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 113, 78 |
| Conread position: | 38-384 |
| Cow position: | chrX:9901436-9901080 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 111, 85 |
| Conread position: | 38-384 |
| Cow position: | chrX:22487369-22487705 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 85 |
| Conread position: | 38-384 |
| Cow position: | chrX:23276295-23276636 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 15 |
| Conread position: | 43-320 |
| Cow position: | chrX:30990759-30990482 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 73 |
| Conread position: | 43-377 |
| Cow position: | chrX:12998398-12998076 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 47, 55 |
| Conread position: | 43-383 |
| Cow position: | chrX:13007439-13007116 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 107, 73 |
| Conread position: | 43-384 |
| Cow position: | chrX:21290296-21289968 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 73 |
| Conread position: | 49-243 |
| Cow position: | chrX:22777527-22777715 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 21, 69 |
| Conread position: | 50-384 |
| Cow position: | chrX:13413935-13413599 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 76 |
| Conread position: | 50-384 |
| Cow position: | chrX:21828723-21829043 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 53 |
| Conread position: | 50-384 |
| Cow position: | chrX:30055845-30056189 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 102, 74 |
| Conread position: | 53-384 |
| Cow position: | chrX:30710547-30710871 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 10 |
| Conread position: | 60-378 |
| Cow position: | chrX:35019854-35020167 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 241 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 90, 36 |
| Conread position: | 66-384 |
| Cow position: | chrX:5300004-5299685 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 76-384 |
| Cow position: | chrX:18955303-18954998 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 164, 74 |
| Conread position: | 81-384 |
| Cow position: | chrX:11669217-11668919 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 35 |
| Conread position: | 89-383 |
| Cow position: | chrX:29883024-29882729 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 61, 34 |
| Conread position: | 96-384 |
| Cow position: | chrX:5834918-5834647 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 217 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 54, 20 |
| Conread position: | 107-383 |
| Cow position: | chrX:22813635-22813919 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 214 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 43, 16 |
| Conread position: | 118-378 |
| Cow position: | chrX:7751152-7751416 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 120, 29 |
| Conread position: | 118-381 |
| Cow position: | chrX:15180190-15179921 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 113, 29 |
| Conread position: | 118-382 |
| Cow position: | chrX:11465752-11465483 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 39, 29 |
| Conread position: | 118-384 |
| Cow position: | chrX:5395717-5395446 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 113, 29 |
| Conread position: | 119-376 |
| Cow position: | chrX:8669840-8670099 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 112, 28 |
| Conread position: | 119-378 |
| Cow position: | chrX:18218648-18218914 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 112, 28 |
| Conread position: | 119-384 |
| Cow position: | chrX:3376972-3376706 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 111, 23 |
| Conread position: | 154-384 |
| Cow position: | chrX:978900-979138 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 9, 135 |
| Conread position: | 154-384 |
| Cow position: | chrX:9173085-9172850 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 9, 26 |
| Conread position: | 154-384 |
| Cow position: | chrX:9193363-9193128 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 9, 26 |
| Conread position: | 154-384 |
| Cow position: | chrX:21305235-21304998 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 12, 134 |
| Conread position: | 154-384 |
| Cow position: | chrX:39521185-39521423 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 9, 135 |
| Conread position: | 158-376 |
| Cow position: | chrX:24088687-24088910 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 73, 133 |
| Conread position: | 158-383 |
| Cow position: | chrX:28635126-28634899 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 73, 131 |
| Conread position: | 159-377 |
| Cow position: | chrX:5324423-5324199 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 66, 120 |
| Conread position: | 159-384 |
| Cow position: | chrX:6576983-6577214 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 72, 132 |
| Conread position: | 161-331 |
| Cow position: | chrX:12655459-12655283 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 70, 130 |
| Conread position: | 161-372 |
| Cow position: | chrX:5284438-5284221 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 70, 126 |
| Conread position: | 161-376 |
| Cow position: | chrX:6873789-6873567 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 135 |
| Conread position: | 161-376 |
| Cow position: | chrX:28562966-28562746 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 72, 131 |
| Conread position: | 161-380 |
| Cow position: | chrX:12804564-12804342 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 70, 130 |
| Conread position: | 161-380 |
| Cow position: | chrX:22610598-22610823 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 72, 131 |
| Conread position: | 161-381 |
| Cow position: | chrX:8963764-8963538 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 58, 133 |
| Conread position: | 161-382 |
| Cow position: | chrX:3422152-3421925 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 67, 126 |
| Conread position: | 161-382 |
| Cow position: | chrX:12182493-12182713 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 77 |
| Conread position: | 161-382 |
| Cow position: | chrX:12341483-12341711 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 70, 130 |
| Conread position: | 161-382 |
| Cow position: | chrX:16274982-16275206 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 69, 127 |
| Conread position: | 161-383 |
| Cow position: | chrX:2860508-2860285 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 76, 126 |
| Conread position: | 161-384 |
| Cow position: | chrX:5862685-5862914 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 70, 131 |
| Conread position: | 161-384 |
| Cow position: | chrX:8586384-8586611 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 66, 128 |
| Conread position: | 161-384 |
| Cow position: | chrX:12672249-12672025 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 69, 115 |
| Conread position: | 161-384 |
| Cow position: | chrX:13077402-13077175 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 64, 130 |
| Conread position: | 161-384 |
| Cow position: | chrX:13097976-13097749 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 64, 130 |
| Conread position: | 161-384 |
| Cow position: | chrX:16565160-16565392 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 61, 128 |
| Conread position: | 161-384 |
| Cow position: | chrX:17479235-17479006 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 70, 130 |
| Conread position: | 161-384 |
| Cow position: | chrX:20360643-20360414 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 70, 131 |
| Conread position: | 161-384 |
| Cow position: | chrX:21339690-21339919 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 70, 118 |
| Conread position: | 161-384 |
| Cow position: | chrX:22526315-22526088 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 60, 131 |
| Conread position: | 161-384 |
| Cow position: | chrX:24325856-24325629 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 70, 129 |
| Conread position: | 161-384 |
| Cow position: | chrX:27427030-27426800 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 67, 196 |
| Conread position: | 161-384 |
| Cow position: | chrX:29174309-29174081 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 76, 130 |
| Conread position: | 161-384 |
| Cow position: | chrX:37848297-37848529 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 70, 133 |
| Conread position: | 169-378 |
| Cow position: | chrX:2101163-2101379 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 62, 123 |
| Conread position: | 169-384 |
| Cow position: | chrX:12280960-12280739 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 62, 123 |
| Conread position: | 169-384 |
| Cow position: | chrX:20316756-20316540 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 59, 121 |
| Conread position: | 169-384 |
| Cow position: | chrX:26401171-26400953 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 59, 122 |
| Conread position: | 180-384 |
| Cow position: | chrX:20803467-20803656 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 162, 61 |
| Conread position: | 184-384 |
| Cow position: | chrX:30010268-30010472 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 46, 105 |
| Conread position: | 195-384 |
| Cow position: | chrX:31192438-31192245 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 96 |
| Conread position: | 215-384 |
| Cow position: | chrX:23041971-23041803 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 129, 70 |
| Conread position: | 239-376 |
| Cow position: | chrX:39717170-39717307 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 103, 46 |
| Conread position: | 248-384 |
| Cow position: | chrX:29951184-29951049 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 96, 18 |
| Conread position: | 252-384 |
| Cow position: | chrX:4795309-4795441 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 90, 33 |
| Conread position: | 259-384 |
| Cow position: | chrX:30990562-30990437 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 82, 26 |
Show alignments to all cow chromosomes.