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Cow genome map

           
Conread name:
           
rspl12_d20.y1
        

               
Conread position:
               
18-275
               

               
Cow position:
               
chr19:24936190-24935917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 181
               

               
Conread position:
               
19-283
               

               
Cow position:
               
chr19:46159676-46159962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
21, 221
               

               
Conread position:
               
19-291
               

               
Cow position:
               
chr19:43440784-43441078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
46, 233
               

               
Conread position:
               
19-376
               

               
Cow position:
               
chr19:42694621-42695004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
19-377
               

               
Cow position:
               
chr19:11424682-11424308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 202
               

               
Conread position:
               
20-211
               

               
Cow position:
               
chr19:15442232-15442417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
45, 89
               

               
Conread position:
               
20-291
               

               
Cow position:
               
chr19:24956818-24956532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
45, 89
               

               
Conread position:
               
20-291
               

               
Cow position:
               
chr19:51267518-51267807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
111, 44
               

               
Conread position:
               
20-377
               

               
Cow position:
               
chr19:23222254-23222642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
45, 75
               

               
Conread position:
               
25-255
               

               
Cow position:
               
chr19:33593567-33593321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
25-351
               

               
Cow position:
               
chr19:38842930-38842582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
42, 70
               

               
Conread position:
               
29-377
               

               
Cow position:
               
chr19:47118860-47118485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
36-284
               

               
Cow position:
               
chr19:41945838-41946091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
29, 185
               

               
Conread position:
               
41-281
               

               
Cow position:
               
chr19:23244853-23244618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
24, 83
               

               
Conread position:
               
61-258
               

               
Cow position:
               
chr19:37503003-37502784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 8
               

               
Conread position:
               
93-369
               

               
Cow position:
               
chr19:7473409-7473694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
33, 122
               

               
Conread position:
               
106-324
               

               
Cow position:
               
chr19:27104469-27104691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 110
               

               
Conread position:
               
115-375
               

               
Cow position:
               
chr19:19919727-19919457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
122-291
               

               
Cow position:
               
chr19:20935496-20935666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
56, 29
               

               
Conread position:
               
129-316
               

               
Cow position:
               
chr19:43702955-43702765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
62, 39
               

               
Conread position:
               
130-283
               

               
Cow position:
               
chr19:33823065-33823222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
49, 62
               

               
Conread position:
               
130-291
               

               
Cow position:
               
chr19:39056993-39057156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
53, 59
               

               
Conread position:
               
130-345
               

               
Cow position:
               
chr19:30276694-30276909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 49
               

               
Conread position:
               
130-368
               

               
Cow position:
               
chr19:4340159-4339918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
49, 95
               

               
Conread position:
               
130-368
               

               
Cow position:
               
chr19:11191875-11191618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
20, 214
               

               
Conread position:
               
130-369
               

               
Cow position:
               
chr19:2734200-2734449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
49, 89
               

               
Conread position:
               
131-377
               

               
Cow position:
               
chr19:8212088-8211825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
48, 97
               

               
Conread position:
               
132-290
               

               
Cow position:
               
chr19:40051635-40051479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 29
               

               
Conread position:
               
132-291
               

               
Cow position:
               
chr19:36059682-36059847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
47, 114
               

               
Conread position:
               
132-294
               

               
Cow position:
               
chr19:51334418-51334591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
132-368
               

               
Cow position:
               
chr19:4502970-4503221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
47, 93
               

               
Conread position:
               
132-368
               

               
Cow position:
               
chr19:47187302-47187057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
47, 81
               

               
Conread position:
               
132-369
               

               
Cow position:
               
chr19:14347762-14348016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
51, 83
               

               
Conread position:
               
132-377
               

               
Cow position:
               
chr19:44757856-44757609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 61
               

               
Conread position:
               
133-248
               

               
Cow position:
               
chr19:39254748-39254629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
46, 94
               

               
Conread position:
               
133-253
               

               
Cow position:
               
chr19:37633601-37633474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
133-254
               

               
Cow position:
               
chr19:21042868-21042995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
133-269
               

               
Cow position:
               
chr19:10186251-10186392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
44, 58
               

               
Conread position:
               
133-272
               

               
Cow position:
               
chr19:43431570-43431429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
44, 81
               

               
Conread position:
               
133-282
               

               
Cow position:
               
chr19:6049910-6049763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
133-283
               

               
Cow position:
               
chr19:20310879-20310726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
45, 89
               

               
Conread position:
               
133-283
               

               
Cow position:
               
chr19:20671150-20670991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
133-283
               

               
Cow position:
               
chr19:34654827-34654669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
133-283
               

               
Cow position:
               
chr19:46454602-46454758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
133-284
               

               
Cow position:
               
chr19:8128067-8128226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 96
               

               
Conread position:
               
133-284
               

               
Cow position:
               
chr19:10213422-10213575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
43, 78
               

               
Conread position:
               
133-284
               

               
Cow position:
               
chr19:11376654-11376500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 82
               

               
Conread position:
               
133-284
               

               
Cow position:
               
chr19:17664392-17664549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
133-284
               

               
Cow position:
               
chr19:17795647-17795802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
51, 28
               

               
Conread position:
               
133-284
               

               
Cow position:
               
chr19:24062048-24062197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
60, 52
               

               
Conread position:
               
133-284
               

               
Cow position:
               
chr19:42240540-42240386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
45, 82
               

               
Conread position:
               
133-284
               

               
Cow position:
               
chr19:44144157-44144009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
133-289
               

               
Cow position:
               
chr19:23304743-23304585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 87
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr19:2589262-2589421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
128, 52
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr19:3621179-3621343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
7, 71
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr19:7492191-7492347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr19:10545957-10545794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
48, 135
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr19:15068242-15068090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 76
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr19:17273969-17273817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 59
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr19:19499801-19499641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr19:20433027-20432863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 92
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr19:21198878-21199049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr19:21378715-21378557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
5, 63
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr19:22765368-22765533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr19:23785939-23786105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr19:25572197-25572359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
45, 89
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr19:31378858-31378688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr19:31762776-31762941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr19:31873868-31874025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr19:32457393-32457556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 111
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr19:33033695-33033529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr19:34911638-34911800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr19:34955946-34955781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr19:36125335-36125500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr19:39794708-39794872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
47, 95
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr19:48722776-48722942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr19:52381283-52381442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 80
               

               
Conread position:
               
133-292
               

               
Cow position:
               
chr19:28451156-28451320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
46, 151
               

               
Conread position:
               
133-293
               

               
Cow position:
               
chr19:1968553-1968391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 82
               

               
Conread position:
               
133-293
               

               
Cow position:
               
chr19:8033491-8033660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
133-293
               

               
Cow position:
               
chr19:8839354-8839517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 82
               

               
Conread position:
               
133-293
               

               
Cow position:
               
chr19:18786574-18786409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 145
               

               
Conread position:
               
133-293
               

               
Cow position:
               
chr19:23005614-23005446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
133-293
               

               
Cow position:
               
chr19:25999383-25999544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
46, 94
               

               
Conread position:
               
133-299
               

               
Cow position:
               
chr19:268105-268274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 31
               

               
Conread position:
               
133-300
               

               
Cow position:
               
chr19:14253385-14253559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
133-300
               

               
Cow position:
               
chr19:53791679-53791504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
133-316
               

               
Cow position:
               
chr19:54294832-54294642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 60
               

               
Conread position:
               
133-321
               

               
Cow position:
               
chr19:15863287-15863091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
45, 80
               

               
Conread position:
               
133-325
               

               
Cow position:
               
chr19:39751232-39751434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
133-334
               

               
Cow position:
               
chr19:33882406-33882207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
133-344
               

               
Cow position:
               
chr19:15887571-15887349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
133-348
               

               
Cow position:
               
chr19:3812264-3812041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 198
               

               
Conread position:
               
133-350
               

               
Cow position:
               
chr19:2138354-2138127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 83
               

               
Conread position:
               
133-350
               

               
Cow position:
               
chr19:51185177-51185401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
6, 83
               

               
Conread position:
               
133-351
               

               
Cow position:
               
chr19:4252221-4251993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
46, 194
               

               
Conread position:
               
133-351
               

               
Cow position:
               
chr19:23403893-23403667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 165
               

               
Conread position:
               
133-351
               

               
Cow position:
               
chr19:28014231-28014458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 31
               

               
Conread position:
               
133-356
               

               
Cow position:
               
chr19:33912882-33912642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
46, 212
               

               
Conread position:
               
133-357
               

               
Cow position:
               
chr19:37562241-37562019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
60, 49
               

               
Conread position:
               
133-364
               

               
Cow position:
               
chr19:25852081-25851832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 86
               

               
Conread position:
               
133-364
               

               
Cow position:
               
chr19:25865173-25864924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 86
               

               
Conread position:
               
133-366
               

               
Cow position:
               
chr19:31825264-31825014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 89
               

               
Conread position:
               
133-368
               

               
Cow position:
               
chr19:10080820-10081073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
45, 82
               

               
Conread position:
               
133-368
               

               
Cow position:
               
chr19:10755062-10755307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 196
               

               
Conread position:
               
133-368
               

               
Cow position:
               
chr19:12748014-12747776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 51
               

               
Conread position:
               
133-368
               

               
Cow position:
               
chr19:13390671-13390912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
46, 79
               

               
Conread position:
               
133-368
               

               
Cow position:
               
chr19:38638050-38637820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
46, 61
               

               
Conread position:
               
133-369
               

               
Cow position:
               
chr19:1664443-1664191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
43, 144
               

               
Conread position:
               
133-369
               

               
Cow position:
               
chr19:2577327-2577565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 97
               

               
Conread position:
               
133-369
               

               
Cow position:
               
chr19:31846791-31846551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
46, 40
               

               
Conread position:
               
133-369
               

               
Cow position:
               
chr19:38907604-38907356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
46, 87
               

               
Conread position:
               
133-369
               

               
Cow position:
               
chr19:46918592-46918849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
46, 213
               

               
Conread position:
               
133-372
               

               
Cow position:
               
chr19:6688254-6687996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
46, 208
               

               
Conread position:
               
133-372
               

               
Cow position:
               
chr19:33932390-33932145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
133-374
               

               
Cow position:
               
chr19:44125399-44125645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
133-376
               

               
Cow position:
               
chr19:5433810-5433547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 51
               

               
Conread position:
               
133-377
               

               
Cow position:
               
chr19:386896-387145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
133-377
               

               
Cow position:
               
chr19:31595050-31595310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 82
               

               
Conread position:
               
133-377
               

               
Cow position:
               
chr19:33468775-33469030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
46, 82
               

               
Conread position:
               
133-377
               

               
Cow position:
               
chr19:53372145-53371889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 82
               

               
Conread position:
               
134-291
               

               
Cow position:
               
chr19:38392550-38392714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
134-368
               

               
Cow position:
               
chr19:55589985-55590231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
44, 163
               

               
Conread position:
               
134-377
               

               
Cow position:
               
chr19:35380796-35380545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
135-267
               

               
Cow position:
               
chr19:21115060-21115194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
44, 80
               

               
Conread position:
               
135-281
               

               
Cow position:
               
chr19:35741911-35742063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
44, 122
               

               
Conread position:
               
135-284
               

               
Cow position:
               
chr19:41584728-41584880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 66
               

               
Conread position:
               
135-289
               

               
Cow position:
               
chr19:34000963-34001119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
44, 86
               

               
Conread position:
               
135-291
               

               
Cow position:
               
chr19:29368152-29368313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
135-291
               

               
Cow position:
               
chr19:46181061-46180902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 87
               

               
Conread position:
               
135-293
               

               
Cow position:
               
chr19:42726108-42726275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
135-326
               

               
Cow position:
               
chr19:48409268-48409467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
135-349
               

               
Cow position:
               
chr19:1152975-1153192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
135-350
               

               
Cow position:
               
chr19:10171754-10171983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
44, 80
               

               
Conread position:
               
135-369
               

               
Cow position:
               
chr19:32450831-32451084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
44, 134
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr19:10286661-10286899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
44, 85
               

               
Conread position:
               
136-281
               

               
Cow position:
               
chr19:36176499-36176650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
43, 98
               

               
Conread position:
               
136-283
               

               
Cow position:
               
chr19:2208022-2207868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 89
               

               
Conread position:
               
136-283
               

               
Cow position:
               
chr19:56001108-56000953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
136-284
               

               
Cow position:
               
chr19:43034996-43035148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
136-291
               

               
Cow position:
               
chr19:8332048-8332208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 109
               

               
Conread position:
               
136-291
               

               
Cow position:
               
chr19:14592804-14592966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
136-291
               

               
Cow position:
               
chr19:33306850-33307014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
136-291
               

               
Cow position:
               
chr19:39360894-39361055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
43, 112
               

               
Conread position:
               
136-292
               

               
Cow position:
               
chr19:4445866-4445709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
136-293
               

               
Cow position:
               
chr19:16694294-16694128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
43, 83
               

               
Conread position:
               
136-294
               

               
Cow position:
               
chr19:4537659-4537501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 54
               

               
Conread position:
               
136-314
               

               
Cow position:
               
chr19:30925564-30925377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
43, 76
               

               
Conread position:
               
136-324
               

               
Cow position:
               
chr19:16096798-16096602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
136-350
               

               
Cow position:
               
chr19:51401255-51401033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
9, 93
               

               
Conread position:
               
136-351
               

               
Cow position:
               
chr19:36461773-36461550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
136-355
               

               
Cow position:
               
chr19:30533695-30533920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
39, 120
               

               
Conread position:
               
136-372
               

               
Cow position:
               
chr19:38596369-38596621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
42, 204
               

               
Conread position:
               
136-373
               

               
Cow position:
               
chr19:6417353-6417601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 53
               

               
Conread position:
               
136-377
               

               
Cow position:
               
chr19:15437863-15438109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
43, 78
               

               
Conread position:
               
136-377
               

               
Cow position:
               
chr19:21092533-21092778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
43, 57
               

               
Conread position:
               
136-377
               

               
Cow position:
               
chr19:35622119-35622365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
43, 83
               

               
Conread position:
               
136-377
               

               
Cow position:
               
chr19:36845002-36845259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
43, 67
               

               
Conread position:
               
137-291
               

               
Cow position:
               
chr19:35018492-35018333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
41, 146
               

               
Conread position:
               
137-294
               

               
Cow position:
               
chr19:19561261-19561427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
137-294
               

               
Cow position:
               
chr19:25025737-25025579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
42, 66
               

               
Conread position:
               
137-312
               

               
Cow position:
               
chr19:26706450-26706264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
137-347
               

               
Cow position:
               
chr19:12698078-12698294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 78
               

               
Conread position:
               
137-373
               

               
Cow position:
               
chr19:53645660-53645421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 78
               

               
Conread position:
               
137-377
               

               
Cow position:
               
chr19:729975-729733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
54, 38
               

               
Conread position:
               
138-283
               

               
Cow position:
               
chr19:47671507-47671654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
138-291
               

               
Cow position:
               
chr19:13129638-13129785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
138-303
               

               
Cow position:
               
chr19:27612412-27612247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
138-308
               

               
Cow position:
               
chr19:28038865-28038699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
168, 47
               

               
Conread position:
               
138-350
               

               
Cow position:
               
chr19:22799327-22799100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 184
               

               
Conread position:
               
141-344
               

               
Cow position:
               
chr19:8864507-8864720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 14
               

               
Conread position:
               
144-256
               

               
Cow position:
               
chr19:3858321-3858202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
144-260
               

               
Cow position:
               
chr19:5656348-5656225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
35, 114
               

               
Conread position:
               
144-283
               

               
Cow position:
               
chr19:34620266-34620126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 49
               

               
Conread position:
               
144-291
               

               
Cow position:
               
chr19:21363681-21363526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
144-366
               

               
Cow position:
               
chr19:21335854-21335609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 196
               

               
Conread position:
               
144-371
               

               
Cow position:
               
chr19:39104249-39104007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
34, 237
               

               
Conread position:
               
145-321
               

               
Cow position:
               
chr19:6531654-6531841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 70
               

               
Conread position:
               
145-350
               

               
Cow position:
               
chr19:20622421-20622631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 69
               

               
Conread position:
               
146-284
               

               
Cow position:
               
chr19:11758837-11758698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
30, 65
               

               
Conread position:
               
146-291
               

               
Cow position:
               
chr19:29625668-29625818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
146-291
               

               
Cow position:
               
chr19:38340212-38340067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
32, 58
               

               
Conread position:
               
146-291
               

               
Cow position:
               
chr19:39576806-39576658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
146-323
               

               
Cow position:
               
chr19:3222564-3222756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
146-372
               

               
Cow position:
               
chr19:1580819-1580584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
28, 69
               

               
Conread position:
               
146-377
               

               
Cow position:
               
chr19:27180495-27180256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 76
               

               
Conread position:
               
146-377
               

               
Cow position:
               
chr19:39697835-39698073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
33, 69
               

               
Conread position:
               
147-291
               

               
Cow position:
               
chr19:9542132-9541981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
148-364
               

               
Cow position:
               
chr19:25851722-25851488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
31, 71
               

               
Conread position:
               
149-291
               

               
Cow position:
               
chr19:25696440-25696291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
150-369
               

               
Cow position:
               
chr19:47727803-47727574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
28, 57
               

               
Conread position:
               
152-285
               

               
Cow position:
               
chr19:52456991-52456851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
164-369
               

               
Cow position:
               
chr19:13316630-13316419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
15, 169
               

               
Conread position:
               
165-368
               

               
Cow position:
               
chr19:24137041-24137261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
14, 206
               

               
Conread position:
               
168-377
               

               
Cow position:
               
chr19:34166150-34166380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
10, 47
               

               
Conread position:
               
178-293
               

               
Cow position:
               
chr19:53840314-53840438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
178-368
               

               
Cow position:
               
chr19:4329249-4329051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
13, 100
               

               
Conread position:
               
178-377
               

               
Cow position:
               
chr19:33290280-33290493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 153
               
Show alignments to all cow chromosomes.