Cow genome map
| Conread name: | rspl12_d20.y1 |
| Conread position: | 17-284 |
| Cow position: | chr24:15247031-15246746 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 29, 216 |
| Conread position: | 19-284 |
| Cow position: | chr24:18374387-18374670 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 41, 73 |
| Conread position: | 19-284 |
| Cow position: | chr24:18732519-18732231 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 191 |
| Conread position: | 19-349 |
| Cow position: | chr24:34396544-34396213 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 48, 72 |
| Conread position: | 19-372 |
| Cow position: | chr24:17955840-17955454 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 15, 336 |
| Conread position: | 19-377 |
| Cow position: | chr24:30484338-30483952 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 286 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 23, 19 |
| Conread position: | 19-377 |
| Cow position: | chr24:32125026-32124642 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 115, 41 |
| Conread position: | 20-284 |
| Cow position: | chr24:40300780-40301051 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 72, 45 |
| Conread position: | 21-284 |
| Cow position: | chr24:30235476-30235765 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 44, 159 |
| Conread position: | 25-267 |
| Cow position: | chr24:11064472-11064729 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 40, 15 |
| Conread position: | 25-293 |
| Cow position: | chr24:6450134-6450398 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 40, 178 |
| Conread position: | 34-301 |
| Cow position: | chr24:12234696-12234417 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 94, 143 |
| Conread position: | 37-262 |
| Cow position: | chr24:33372176-33372425 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 84-272 |
| Cow position: | chr24:3663847-3664051 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 115-377 |
| Cow position: | chr24:27039758-27040044 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 118-312 |
| Cow position: | chr24:27735852-27735652 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 61, 104 |
| Conread position: | 123-291 |
| Cow position: | chr24:21264782-21264609 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 56, 18 |
| Conread position: | 130-281 |
| Cow position: | chr24:24491276-24491121 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 47, 84 |
| Conread position: | 130-300 |
| Cow position: | chr24:25194006-25194177 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 130-350 |
| Cow position: | chr24:250831-250614 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 86, 39 |
| Conread position: | 131-291 |
| Cow position: | chr24:211717-211884 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 131-323 |
| Cow position: | chr24:18970756-18970567 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 127, 54 |
| Conread position: | 132-284 |
| Cow position: | chr24:24250469-24250620 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 79 |
| Conread position: | 132-291 |
| Cow position: | chr24:27874341-27874501 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 88 |
| Conread position: | 132-291 |
| Cow position: | chr24:37246481-37246312 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 132-372 |
| Cow position: | chr24:40055985-40055745 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 47, 71 |
| Conread position: | 133-253 |
| Cow position: | chr24:15666671-15666545 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 133-253 |
| Cow position: | chr24:20988262-20988141 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 80 |
| Conread position: | 133-267 |
| Cow position: | chr24:11839917-11840052 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 46, 16 |
| Conread position: | 133-267 |
| Cow position: | chr24:19466195-19466055 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 47, 28 |
| Conread position: | 133-273 |
| Cow position: | chr24:25950929-25950781 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 133-275 |
| Cow position: | chr24:15288595-15288743 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 136 |
| Conread position: | 133-277 |
| Cow position: | chr24:19804425-19804576 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 133-283 |
| Cow position: | chr24:31816323-31816479 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 46, 110 |
| Conread position: | 133-284 |
| Cow position: | chr24:1269542-1269690 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 67 |
| Conread position: | 133-284 |
| Cow position: | chr24:5754579-5754730 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 45, 57 |
| Conread position: | 133-284 |
| Cow position: | chr24:6900562-6900719 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 82 |
| Conread position: | 133-284 |
| Cow position: | chr24:25424801-25424955 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 46, 88 |
| Conread position: | 133-284 |
| Cow position: | chr24:29063908-29063756 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 47, 60 |
| Conread position: | 133-284 |
| Cow position: | chr24:39226736-39226893 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 43, 142 |
| Conread position: | 133-287 |
| Cow position: | chr24:39483211-39483372 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 133-289 |
| Cow position: | chr24:18331474-18331621 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 53 |
| Conread position: | 133-289 |
| Cow position: | chr24:28303610-28303456 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 46, 12 |
| Conread position: | 133-291 |
| Cow position: | chr24:2730832-2730670 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 46, 80 |
| Conread position: | 133-291 |
| Cow position: | chr24:3165559-3165715 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 45, 82 |
| Conread position: | 133-291 |
| Cow position: | chr24:7913736-7913903 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 133-291 |
| Cow position: | chr24:11876621-11876784 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 133-291 |
| Cow position: | chr24:17294449-17294292 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 133-291 |
| Cow position: | chr24:18390550-18390389 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 133-291 |
| Cow position: | chr24:20024345-20024515 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 133-291 |
| Cow position: | chr24:20874414-20874579 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 133-291 |
| Cow position: | chr24:22193463-22193630 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 133-291 |
| Cow position: | chr24:24137113-24136957 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 54, 76 |
| Conread position: | 133-291 |
| Cow position: | chr24:27267372-27267533 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 12, 61 |
| Conread position: | 133-291 |
| Cow position: | chr24:27941270-27941110 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 58, 98 |
| Conread position: | 133-291 |
| Cow position: | chr24:28062683-28062851 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 133-291 |
| Cow position: | chr24:28721626-28721790 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 133-291 |
| Cow position: | chr24:30314298-30314130 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 133-291 |
| Cow position: | chr24:36404409-36404245 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 133-291 |
| Cow position: | chr24:37650408-37650569 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 133-291 |
| Cow position: | chr24:38375023-38375184 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 133-291 |
| Cow position: | chr24:40908754-40908921 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 133-292 |
| Cow position: | chr24:28600870-28600714 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 133-293 |
| Cow position: | chr24:25320727-25320897 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 133-293 |
| Cow position: | chr24:27967818-27967978 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 46, 87 |
| Conread position: | 133-293 |
| Cow position: | chr24:32205056-32204893 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 46, 87 |
| Conread position: | 133-299 |
| Cow position: | chr24:33098750-33098582 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 46, 75 |
| Conread position: | 133-300 |
| Cow position: | chr24:27543738-27543568 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 52 |
| Conread position: | 133-321 |
| Cow position: | chr24:3631255-3631447 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 133-328 |
| Cow position: | chr24:814527-814326 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 46, 82 |
| Conread position: | 133-339 |
| Cow position: | chr24:591648-591869 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 46, 83 |
| Conread position: | 133-340 |
| Cow position: | chr24:23442843-23442629 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 126, 58 |
| Conread position: | 133-342 |
| Cow position: | chr24:19658286-19658518 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 133-348 |
| Cow position: | chr24:40129863-40130090 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 133-350 |
| Cow position: | chr24:17311471-17311253 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 87 |
| Conread position: | 133-350 |
| Cow position: | chr24:18485262-18485030 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 99 |
| Conread position: | 133-364 |
| Cow position: | chr24:6340755-6340993 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 133-368 |
| Cow position: | chr24:3493631-3493869 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 62, 23 |
| Conread position: | 133-368 |
| Cow position: | chr24:27290614-27290856 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 12 |
| Conread position: | 133-369 |
| Cow position: | chr24:15861863-15861612 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 46, 82 |
| Conread position: | 133-369 |
| Cow position: | chr24:35795002-35794749 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 133-372 |
| Cow position: | chr24:33944145-33944391 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 46, 58 |
| Conread position: | 133-372 |
| Cow position: | chr24:43200536-43200280 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 83 |
| Conread position: | 133-376 |
| Cow position: | chr24:29388984-29389226 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 70 |
| Conread position: | 133-377 |
| Cow position: | chr24:18741833-18741576 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 81 |
| Conread position: | 133-377 |
| Cow position: | chr24:27844782-27844532 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 46, 80 |
| Conread position: | 133-377 |
| Cow position: | chr24:29673257-29673518 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 46, 82 |
| Conread position: | 134-284 |
| Cow position: | chr24:18324355-18324514 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 134-291 |
| Cow position: | chr24:11006954-11007119 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 134-291 |
| Cow position: | chr24:15473094-15473260 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 134-291 |
| Cow position: | chr24:39440818-39440655 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 45, 81 |
| Conread position: | 134-291 |
| Cow position: | chr24:44041270-44041112 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 59, 50 |
| Conread position: | 134-293 |
| Cow position: | chr24:14279627-14279795 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 134-293 |
| Cow position: | chr24:39493036-39493196 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 44, 85 |
| Conread position: | 134-294 |
| Cow position: | chr24:33238809-33238640 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 45, 82 |
| Conread position: | 134-324 |
| Cow position: | chr24:38347419-38347626 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 135-284 |
| Cow position: | chr24:27465830-27465685 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 58 |
| Conread position: | 135-291 |
| Cow position: | chr24:6956917-6957077 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 83 |
| Conread position: | 135-291 |
| Cow position: | chr24:17104826-17104673 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 45, 76 |
| Conread position: | 135-291 |
| Cow position: | chr24:20970052-20969900 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 71 |
| Conread position: | 135-294 |
| Cow position: | chr24:18734615-18734449 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 34 |
| Conread position: | 135-365 |
| Cow position: | chr24:11886897-11887142 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 44, 133 |
| Conread position: | 135-368 |
| Cow position: | chr24:16625761-16625501 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 44, 81 |
| Conread position: | 135-368 |
| Cow position: | chr24:27906174-27906422 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 44, 147 |
| Conread position: | 135-369 |
| Cow position: | chr24:19769238-19769475 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 43, 58 |
| Conread position: | 135-377 |
| Cow position: | chr24:43364103-43364357 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 44, 58 |
| Conread position: | 136-272 |
| Cow position: | chr24:32014871-32015009 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 43, 57 |
| Conread position: | 136-282 |
| Cow position: | chr24:23695156-23695003 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 136-284 |
| Cow position: | chr24:17860510-17860363 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 42, 72 |
| Conread position: | 136-291 |
| Cow position: | chr24:29781902-29782063 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 136-293 |
| Cow position: | chr24:39219106-39218940 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 136-323 |
| Cow position: | chr24:27720012-27719815 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 55, 84 |
| Conread position: | 136-341 |
| Cow position: | chr24:43635175-43635391 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 43, 195 |
| Conread position: | 136-349 |
| Cow position: | chr24:5151975-5152200 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 136-368 |
| Cow position: | chr24:8886657-8886893 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 43, 57 |
| Conread position: | 136-368 |
| Cow position: | chr24:34532864-34533100 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 43, 149 |
| Conread position: | 136-372 |
| Cow position: | chr24:36486319-36486075 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 55, 181 |
| Conread position: | 136-376 |
| Cow position: | chr24:15508794-15508543 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 43, 88 |
| Conread position: | 136-377 |
| Cow position: | chr24:30229209-30229469 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 43, 212 |
| Conread position: | 136-377 |
| Cow position: | chr24:43432542-43432788 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 42, 54 |
| Conread position: | 137-281 |
| Cow position: | chr24:30177978-30178124 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 42, 56 |
| Conread position: | 137-282 |
| Cow position: | chr24:18025230-18025079 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 41, 120 |
| Conread position: | 137-284 |
| Cow position: | chr24:28496847-28496691 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 137-351 |
| Cow position: | chr24:38814713-38814931 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 42, 77 |
| Conread position: | 137-368 |
| Cow position: | chr24:7917627-7917376 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 137-368 |
| Cow position: | chr24:28553803-28553569 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 42, 76 |
| Conread position: | 137-368 |
| Cow position: | chr24:35073834-35074078 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 42, 78 |
| Conread position: | 137-371 |
| Cow position: | chr24:39350465-39350227 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 54, 72 |
| Conread position: | 138-291 |
| Cow position: | chr24:5141683-5141843 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 138-367 |
| Cow position: | chr24:16268361-16268143 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 41, 55 |
| Conread position: | 138-368 |
| Cow position: | chr24:34315100-34315341 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 41, 55 |
| Conread position: | 142-342 |
| Cow position: | chr24:6487667-6487875 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 37, 203 |
| Conread position: | 144-291 |
| Cow position: | chr24:3152828-3152681 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 60 |
| Conread position: | 144-323 |
| Cow position: | chr24:41068017-41068205 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 72 |
| Conread position: | 144-350 |
| Cow position: | chr24:29679562-29679346 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 144-377 |
| Cow position: | chr24:34564875-34565119 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 35, 81 |
| Conread position: | 146-284 |
| Cow position: | chr24:18474997-18474853 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 146-294 |
| Cow position: | chr24:17363898-17363745 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 33, 88 |
| Conread position: | 146-369 |
| Cow position: | chr24:20942920-20943154 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 88 |
| Conread position: | 147-290 |
| Cow position: | chr24:29596064-29595912 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 108 |
| Conread position: | 147-294 |
| Cow position: | chr24:2096137-2095988 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 68 |
| Conread position: | 148-289 |
| Cow position: | chr24:42825745-42825597 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 152-323 |
| Cow position: | chr24:24457491-24457309 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 17, 69 |
| Conread position: | 157-291 |
| Cow position: | chr24:33222178-33222043 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 178-374 |
| Cow position: | chr24:6102607-6102822 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 13, 177 |
| Conread position: | 181-350 |
| Cow position: | chr24:10125652-10125838 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 7 |
| Conread position: | 188-368 |
| Cow position: | chr24:28253503-28253692 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 107, 23 |
Show alignments to all cow chromosomes.