Cow genome map
| Conread name: | rspl12_d20.y1 |
| Conread position: | 19-283 |
| Cow position: | chr25:16866856-16867143 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 46, 155 |
| Conread position: | 19-283 |
| Cow position: | chr25:20460760-20461040 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 19-291 |
| Cow position: | chr25:15319548-15319841 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 26 |
| Conread position: | 19-293 |
| Cow position: | chr25:18265812-18266083 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 44, 105 |
| Conread position: | 20-371 |
| Cow position: | chr25:36761735-36762116 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 45, 94 |
| Conread position: | 22-259 |
| Cow position: | chr25:8628585-8628334 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 183 |
| Conread position: | 22-377 |
| Cow position: | chr25:36081518-36081893 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 325 |
| Conread position: | 25-377 |
| Cow position: | chr25:11666291-11666666 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 267 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 6, 16 |
| Conread position: | 26-320 |
| Cow position: | chr25:20020343-20020040 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 27 |
| Conread position: | 35-351 |
| Cow position: | chr25:10137740-10138081 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 249 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 27, 200 |
| Conread position: | 42-377 |
| Cow position: | chr25:5847154-5846791 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 23, 125 |
| Conread position: | 45-291 |
| Cow position: | chr25:12117329-12117067 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 20, 125 |
| Conread position: | 47-324 |
| Cow position: | chr25:10013739-10013464 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 18, 135 |
| Conread position: | 62-271 |
| Cow position: | chr25:18293433-18293651 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 66, 143 |
| Conread position: | 79-272 |
| Cow position: | chr25:16400551-16400356 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 16 |
| Conread position: | 108-287 |
| Cow position: | chr25:19478424-19478608 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 12, 35 |
| Conread position: | 108-291 |
| Cow position: | chr25:21289073-21289268 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 129-355 |
| Cow position: | chr25:15254575-15254349 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 49, 86 |
| Conread position: | 130-377 |
| Cow position: | chr25:14791509-14791775 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 49, 73 |
| Conread position: | 132-283 |
| Cow position: | chr25:36119960-36120114 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 47, 72 |
| Conread position: | 132-350 |
| Cow position: | chr25:21950885-21951111 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 47, 92 |
| Conread position: | 132-375 |
| Cow position: | chr25:22203931-22203670 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 207 |
| Conread position: | 133-256 |
| Cow position: | chr25:13720778-13720653 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 90 |
| Conread position: | 133-258 |
| Cow position: | chr25:10156351-10156477 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 87 |
| Conread position: | 133-258 |
| Cow position: | chr25:16319372-16319242 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 133-268 |
| Cow position: | chr25:5837206-5837064 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 133-282 |
| Cow position: | chr25:15273450-15273601 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 133-283 |
| Cow position: | chr25:22314961-22315116 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 80 |
| Conread position: | 133-284 |
| Cow position: | chr25:4547960-4547802 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 133-284 |
| Cow position: | chr25:7800896-7801053 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 41, 152 |
| Conread position: | 133-284 |
| Cow position: | chr25:36037020-36036866 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 46, 82 |
| Conread position: | 133-291 |
| Cow position: | chr25:1735556-1735392 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 46, 132 |
| Conread position: | 133-291 |
| Cow position: | chr25:3992550-3992718 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 133-291 |
| Cow position: | chr25:8347269-8347430 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 46, 87 |
| Conread position: | 133-291 |
| Cow position: | chr25:17712294-17712458 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 45, 79 |
| Conread position: | 133-291 |
| Cow position: | chr25:20348618-20348783 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 133-291 |
| Cow position: | chr25:22531047-22531206 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 106 |
| Conread position: | 133-291 |
| Cow position: | chr25:24008417-24008253 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 46, 82 |
| Conread position: | 133-291 |
| Cow position: | chr25:25051624-25051459 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 43, 101 |
| Conread position: | 133-291 |
| Cow position: | chr25:26238631-26238792 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 46, 82 |
| Conread position: | 133-292 |
| Cow position: | chr25:18988136-18988304 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 133-292 |
| Cow position: | chr25:19679102-19679266 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 46, 144 |
| Conread position: | 133-292 |
| Cow position: | chr25:33550266-33550430 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 133-293 |
| Cow position: | chr25:18448597-18448763 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 46, 124 |
| Conread position: | 133-300 |
| Cow position: | chr25:18490832-18491005 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 83 |
| Conread position: | 133-301 |
| Cow position: | chr25:21266766-21266941 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 86 |
| Conread position: | 133-316 |
| Cow position: | chr25:34169713-34169901 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 83 |
| Conread position: | 133-323 |
| Cow position: | chr25:9961418-9961208 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 133-323 |
| Cow position: | chr25:10365992-10365790 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 45, 83 |
| Conread position: | 133-323 |
| Cow position: | chr25:33664136-33663945 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 87 |
| Conread position: | 133-336 |
| Cow position: | chr25:20060271-20060054 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 45, 23 |
| Conread position: | 133-336 |
| Cow position: | chr25:36026767-36026984 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 133-344 |
| Cow position: | chr25:1096337-1096551 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 46, 81 |
| Conread position: | 133-349 |
| Cow position: | chr25:7306058-7306290 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 46, 214 |
| Conread position: | 133-350 |
| Cow position: | chr25:8918518-8918290 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 45, 204 |
| Conread position: | 133-350 |
| Cow position: | chr25:12824254-12824031 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 46, 78 |
| Conread position: | 133-366 |
| Cow position: | chr25:31732976-31732729 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 47, 106 |
| Conread position: | 133-368 |
| Cow position: | chr25:788029-788271 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 52, 39 |
| Conread position: | 133-368 |
| Cow position: | chr25:6464269-6464022 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 133-368 |
| Cow position: | chr25:9957272-9957031 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 46, 58 |
| Conread position: | 133-368 |
| Cow position: | chr25:10643550-10643302 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 45, 218 |
| Conread position: | 133-368 |
| Cow position: | chr25:16922034-16921790 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 45, 152 |
| Conread position: | 133-369 |
| Cow position: | chr25:11585278-11585526 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 46, 124 |
| Conread position: | 133-369 |
| Cow position: | chr25:24405976-24405725 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 82 |
| Conread position: | 133-373 |
| Cow position: | chr25:15377093-15377340 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 133-375 |
| Cow position: | chr25:33978441-33978199 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 118, 51 |
| Conread position: | 133-377 |
| Cow position: | chr25:7216588-7216846 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 45, 196 |
| Conread position: | 133-377 |
| Cow position: | chr25:17354142-17354385 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 46, 81 |
| Conread position: | 133-377 |
| Cow position: | chr25:30319689-30319430 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 46, 82 |
| Conread position: | 134-283 |
| Cow position: | chr25:18294552-18294401 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 44, 59 |
| Conread position: | 134-284 |
| Cow position: | chr25:15694745-15694896 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 44, 69 |
| Conread position: | 134-291 |
| Cow position: | chr25:19129615-19129774 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 22 |
| Conread position: | 134-293 |
| Cow position: | chr25:22297256-22297095 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 44, 66 |
| Conread position: | 134-323 |
| Cow position: | chr25:4002557-4002763 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 44, 65 |
| Conread position: | 134-350 |
| Cow position: | chr25:7329305-7329535 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 44, 199 |
| Conread position: | 134-350 |
| Cow position: | chr25:37594175-37594392 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 45, 59 |
| Conread position: | 134-377 |
| Cow position: | chr25:1838001-1838255 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 45, 22 |
| Conread position: | 135-271 |
| Cow position: | chr25:19576677-19576539 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 44, 77 |
| Conread position: | 135-276 |
| Cow position: | chr25:9842763-9842910 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 135-284 |
| Cow position: | chr25:12778770-12778614 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 135-284 |
| Cow position: | chr25:18935112-18934958 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 135-284 |
| Cow position: | chr25:20023631-20023475 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 135-284 |
| Cow position: | chr25:21209186-21209030 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 135-284 |
| Cow position: | chr25:26087277-26087435 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 135-300 |
| Cow position: | chr25:35347666-35347838 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 135-329 |
| Cow position: | chr25:12204232-12204438 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 44, 80 |
| Conread position: | 135-350 |
| Cow position: | chr25:16001758-16001539 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 44, 78 |
| Conread position: | 135-350 |
| Cow position: | chr25:24452407-24452189 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 44, 21 |
| Conread position: | 135-350 |
| Cow position: | chr25:38135510-38135736 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 58, 53 |
| Conread position: | 135-365 |
| Cow position: | chr25:24572836-24573072 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 68 |
| Conread position: | 135-368 |
| Cow position: | chr25:12097604-12097847 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 50, 108 |
| Conread position: | 135-368 |
| Cow position: | chr25:21895124-21894877 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 44, 80 |
| Conread position: | 135-377 |
| Cow position: | chr25:6891757-6891519 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 57 |
| Conread position: | 136-256 |
| Cow position: | chr25:40321530-40321403 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 136-284 |
| Cow position: | chr25:30279444-30279290 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 40, 109 |
| Conread position: | 136-284 |
| Cow position: | chr25:35607961-35607807 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 16, 94 |
| Conread position: | 136-291 |
| Cow position: | chr25:7581665-7581503 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 136-291 |
| Cow position: | chr25:11662057-11661895 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 136-291 |
| Cow position: | chr25:17975604-17975446 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 88 |
| Conread position: | 136-303 |
| Cow position: | chr25:25754234-25754063 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 43, 89 |
| Conread position: | 136-323 |
| Cow position: | chr25:2110846-2111030 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 43, 66 |
| Conread position: | 136-350 |
| Cow position: | chr25:26654669-26654897 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 43, 205 |
| Conread position: | 136-351 |
| Cow position: | chr25:12293988-12293761 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 200 |
| Conread position: | 136-365 |
| Cow position: | chr25:14196619-14196865 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 43, 198 |
| Conread position: | 136-368 |
| Cow position: | chr25:25827225-25827478 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 43, 216 |
| Conread position: | 136-368 |
| Cow position: | chr25:28188186-28187938 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 43, 92 |
| Conread position: | 136-369 |
| Cow position: | chr25:33691316-33691567 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 43, 222 |
| Conread position: | 136-372 |
| Cow position: | chr25:5514769-5515026 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 218 |
| Conread position: | 136-377 |
| Cow position: | chr25:16064659-16064910 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 83 |
| Conread position: | 136-377 |
| Cow position: | chr25:17658377-17658629 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 43, 78 |
| Conread position: | 136-377 |
| Cow position: | chr25:20069483-20069739 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 204 |
| Conread position: | 136-377 |
| Cow position: | chr25:33256131-33256371 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 43, 79 |
| Conread position: | 137-276 |
| Cow position: | chr25:14266740-14266597 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 78 |
| Conread position: | 137-285 |
| Cow position: | chr25:9642118-9642271 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 42, 119 |
| Conread position: | 137-294 |
| Cow position: | chr25:20402956-20402788 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 137-348 |
| Cow position: | chr25:26700802-26701014 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 41, 77 |
| Conread position: | 137-377 |
| Cow position: | chr25:61421-61668 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 41, 78 |
| Conread position: | 138-293 |
| Cow position: | chr25:6474334-6474173 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 41, 129 |
| Conread position: | 138-296 |
| Cow position: | chr25:16316662-16316820 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 65 |
| Conread position: | 138-365 |
| Cow position: | chr25:21245842-21245600 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 40, 77 |
| Conread position: | 139-291 |
| Cow position: | chr25:6256172-6256015 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 40, 75 |
| Conread position: | 144-291 |
| Cow position: | chr25:36033207-36033359 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 144-323 |
| Cow position: | chr25:35625403-35625221 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 34, 17 |
| Conread position: | 144-328 |
| Cow position: | chr25:6424817-6424620 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 144-369 |
| Cow position: | chr25:12817143-12817381 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 131 |
| Conread position: | 144-377 |
| Cow position: | chr25:9396221-9396463 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 35, 71 |
| Conread position: | 145-253 |
| Cow position: | chr25:35902011-35902125 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 145-291 |
| Cow position: | chr25:20785812-20785664 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 34, 77 |
| Conread position: | 145-291 |
| Cow position: | chr25:24168131-24167980 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 74 |
| Conread position: | 146-275 |
| Cow position: | chr25:36557459-36557595 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 146-293 |
| Cow position: | chr25:10218278-10218124 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 48 |
| Conread position: | 146-366 |
| Cow position: | chr25:35332938-35333164 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 111, 34 |
| Conread position: | 148-277 |
| Cow position: | chr25:21193169-21193033 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 150-284 |
| Cow position: | chr25:7007693-7007829 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 29, 43 |
| Conread position: | 150-294 |
| Cow position: | chr25:18564272-18564414 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 110, 66 |
| Conread position: | 164-369 |
| Cow position: | chr25:26090024-26089805 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 59 |
| Conread position: | 165-377 |
| Cow position: | chr25:26270142-26269919 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 14, 50 |
| Conread position: | 170-350 |
| Cow position: | chr25:34768923-34768746 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 178-368 |
| Cow position: | chr25:13672195-13672402 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 13, 163 |
Show alignments to all cow chromosomes.