Cow genome map

Conread name: rspl12_d20.y1

Conread position: 19-189
Cow position: chr26:8820411-8820227 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 55

Conread position: 19-262
Cow position: chr26:14737563-14737818 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 191
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 21, 15

Conread position: 19-287
Cow position: chr26:13706351-13706068 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 191

Conread position: 19-291
Cow position: chr26:9491577-9491866 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 188

Conread position: 19-344
Cow position: chr26:21351340-21351690 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 110

Conread position: 19-348
Cow position: chr26:9850441-9850094 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 253
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 20, 180

Conread position: 19-348
Cow position: chr26:9853950-9853604 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 248
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 46, 179

Conread position: 19-368
Cow position: chr26:16549640-16550010 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 259
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 46, 15

Conread position: 19-368
Cow position: chr26:35448721-35449089 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 48, 86

Conread position: 19-370
Cow position: chr26:34108407-34108786 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 263
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 46, 228

Conread position: 25-350
Cow position: chr26:11135038-11134681 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 247
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 160

Conread position: 53-291
Cow position: chr26:27594327-27594572 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 12, 127

Conread position: 71-281
Cow position: chr26:31061908-31062132 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 60, 153

Conread position: 98-377
Cow position: chr26:26294443-26294157 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 199
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 81, 17

Conread position: 121-377
Cow position: chr26:6006281-6006017 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 157

Conread position: 130-377
Cow position: chr26:2531396-2531145 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 18

Conread position: 130-377
Cow position: chr26:8746056-8745784 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 132-291
Cow position: chr26:5306910-5307076 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 132-291
Cow position: chr26:8810910-8811070 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 47, 61

Conread position: 133-269
Cow position: chr26:30254855-30254722 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 70

Conread position: 133-272
Cow position: chr26:15857455-15857606 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 133-283
Cow position: chr26:13801890-13802046 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 46, 123

Conread position: 133-284
Cow position: chr26:14174075-14174236 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 133-284
Cow position: chr26:20291903-20291749 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 71

Conread position: 133-284
Cow position: chr26:21637258-21637101 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 145

Conread position: 133-284
Cow position: chr26:26670963-26670813 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 27

Conread position: 133-284
Cow position: chr26:30752085-30751929 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 82

Conread position: 133-289
Cow position: chr26:16783601-16783762 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 133-291
Cow position: chr26:6188075-6188234 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 59

Conread position: 133-291
Cow position: chr26:6793720-6793883 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 92

Conread position: 133-291
Cow position: chr26:6793919-6794091 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 133-291
Cow position: chr26:9104502-9104339 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 133-291
Cow position: chr26:13270899-13270733 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 133-291
Cow position: chr26:27491724-27491561 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 12

Conread position: 133-291
Cow position: chr26:28442226-28442066 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 9

Conread position: 133-291
Cow position: chr26:33744668-33744834 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 133-293
Cow position: chr26:31701594-31701764 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 133-314
Cow position: chr26:16167134-16166945 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 47, 82

Conread position: 133-336
Cow position: chr26:19459451-19459679 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 175
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 46, 100

Conread position: 133-350
Cow position: chr26:7525689-7525468 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 46, 81

Conread position: 133-350
Cow position: chr26:17401541-17401768 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 58

Conread position: 133-350
Cow position: chr26:23926199-23925980 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 46, 77

Conread position: 133-353
Cow position: chr26:22180279-22180503 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 47, 125

Conread position: 133-366
Cow position: chr26:12807737-12807503 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 46, 28

Conread position: 133-368
Cow position: chr26:3182170-3181913 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 46, 0

Conread position: 133-368
Cow position: chr26:20182539-20182788 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 172

Conread position: 133-368
Cow position: chr26:28243840-28243597 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 60

Conread position: 133-377
Cow position: chr26:4585431-4585173 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 201

Conread position: 133-377
Cow position: chr26:6714504-6714263 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 80

Conread position: 133-377
Cow position: chr26:23097398-23097145 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 16

Conread position: 133-377
Cow position: chr26:29332879-29333130 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 122, 41

Conread position: 134-291
Cow position: chr26:13021369-13021205 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 134-369
Cow position: chr26:25393810-25394060 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 190
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 45, 72

Conread position: 134-377
Cow position: chr26:32776725-32776469 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 75

Conread position: 135-284
Cow position: chr26:35704167-35704323 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 135-291
Cow position: chr26:5988940-5988786 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 44, 85

Conread position: 135-291
Cow position: chr26:19447643-19447484 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 44, 16

Conread position: 135-291
Cow position: chr26:32898090-32897931 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 80

Conread position: 135-323
Cow position: chr26:7224835-7224650 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 125, 53

Conread position: 135-323
Cow position: chr26:9099971-9099780 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 58

Conread position: 135-340
Cow position: chr26:613891-613691 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 70

Conread position: 135-350
Cow position: chr26:32013412-32013638 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 42, 68

Conread position: 135-350
Cow position: chr26:34738367-34738142 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 135-368
Cow position: chr26:24280610-24280850 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 80

Conread position: 136-283
Cow position: chr26:9867333-9867185 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 52

Conread position: 136-284
Cow position: chr26:33202277-33202122 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 136-290
Cow position: chr26:8352740-8352900 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 121

Conread position: 136-291
Cow position: chr26:3072181-3072025 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 98

Conread position: 136-323
Cow position: chr26:20846405-20846606 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 136-349
Cow position: chr26:18918289-18918074 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 79

Conread position: 136-350
Cow position: chr26:11263418-11263646 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 198

Conread position: 136-350
Cow position: chr26:15200735-15200509 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 64

Conread position: 136-351
Cow position: chr26:19774522-19774294 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 98

Conread position: 136-351
Cow position: chr26:23142316-23142099 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 118, 49

Conread position: 136-368
Cow position: chr26:6447826-6447571 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 191
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 26, 0

Conread position: 136-368
Cow position: chr26:7148517-7148279 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 170

Conread position: 136-372
Cow position: chr26:17057464-17057709 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 43, 97

Conread position: 136-376
Cow position: chr26:21242885-21243138 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 79

Conread position: 136-377
Cow position: chr26:10768119-10767875 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 159, 48

Conread position: 136-377
Cow position: chr26:31779256-31779519 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 30

Conread position: 138-284
Cow position: chr26:32652942-32652793 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 84

Conread position: 139-290
Cow position: chr26:8186435-8186591 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 85

Conread position: 144-339
Cow position: chr26:30128229-30128025 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 183

Conread position: 145-291
Cow position: chr26:33567252-33567105 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 77

Conread position: 146-290
Cow position: chr26:25526038-25526186 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 33, 88

Conread position: 176-368
Cow position: chr26:22249658-22249451 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 172

Conread position: 178-372
Cow position: chr26:27761823-27761625 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 35

Show alignments to all cow chromosomes.