Cow genome map
| Conread name: | rspl12_d20.y1 |
| Conread position: | 17-289 |
| Cow position: | chr28:10478701-10478416 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 48, 186 |
| Conread position: | 19-237 |
| Cow position: | chr28:23254161-23253922 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 46, 67 |
| Conread position: | 19-284 |
| Cow position: | chr28:11426910-11426620 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 44, 145 |
| Conread position: | 19-291 |
| Cow position: | chr28:25248999-25249282 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 208 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 46, 204 |
| Conread position: | 19-342 |
| Cow position: | chr28:25596288-25596615 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 46, 73 |
| Conread position: | 20-284 |
| Cow position: | chr28:10529838-10529562 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 210 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 45, 209 |
| Conread position: | 22-267 |
| Cow position: | chr28:17316493-17316768 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 22-291 |
| Cow position: | chr28:9285735-9285445 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 22-372 |
| Cow position: | chr28:5773293-5773655 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 263 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 43, 57 |
| Conread position: | 24-267 |
| Cow position: | chr28:9294671-9294920 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 43, 16 |
| Conread position: | 24-323 |
| Cow position: | chr28:21672444-21672764 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 25-160 |
| Cow position: | chr28:3493994-3493858 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 25-291 |
| Cow position: | chr28:13447367-13447626 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 40, 84 |
| Conread position: | 25-291 |
| Cow position: | chr28:33163825-33163535 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 25-368 |
| Cow position: | chr28:26103365-26103718 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 40, 178 |
| Conread position: | 29-350 |
| Cow position: | chr28:30303551-30303199 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 36, 155 |
| Conread position: | 29-350 |
| Cow position: | chr28:31987254-31987605 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 35, 111 |
| Conread position: | 30-350 |
| Cow position: | chr28:5129075-5128736 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 35, 145 |
| Conread position: | 55-283 |
| Cow position: | chr28:23775737-23775968 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 10, 88 |
| Conread position: | 114-284 |
| Cow position: | chr28:2738056-2737886 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 65, 16 |
| Conread position: | 118-291 |
| Cow position: | chr28:11884769-11884591 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 60, 12 |
| Conread position: | 124-293 |
| Cow position: | chr28:17362820-17362658 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 130-284 |
| Cow position: | chr28:26269097-26269249 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 5 |
| Conread position: | 130-289 |
| Cow position: | chr28:5771134-5771293 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 49, 82 |
| Conread position: | 130-293 |
| Cow position: | chr28:18717358-18717190 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 86 |
| Conread position: | 130-332 |
| Cow position: | chr28:14150999-14151210 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 48, 85 |
| Conread position: | 130-337 |
| Cow position: | chr28:15007929-15008145 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 66 |
| Conread position: | 130-350 |
| Cow position: | chr28:5144758-5144528 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 45, 86 |
| Conread position: | 130-377 |
| Cow position: | chr28:8408504-8408759 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 49, 77 |
| Conread position: | 131-369 |
| Cow position: | chr28:23007960-23007715 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 48, 62 |
| Conread position: | 132-253 |
| Cow position: | chr28:1099875-1099754 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 83 |
| Conread position: | 132-269 |
| Cow position: | chr28:5366363-5366221 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 47, 21 |
| Conread position: | 132-291 |
| Cow position: | chr28:7590415-7590252 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 47, 61 |
| Conread position: | 132-372 |
| Cow position: | chr28:26719127-26719361 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 47, 28 |
| Conread position: | 133-254 |
| Cow position: | chr28:25498736-25498608 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 133-260 |
| Cow position: | chr28:7372483-7372353 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 47, 28 |
| Conread position: | 133-275 |
| Cow position: | chr28:10295957-10296112 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 133-276 |
| Cow position: | chr28:3024144-3023998 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 82 |
| Conread position: | 133-277 |
| Cow position: | chr28:25762797-25762941 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 57 |
| Conread position: | 133-281 |
| Cow position: | chr28:2905348-2905499 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 82 |
| Conread position: | 133-281 |
| Cow position: | chr28:9636689-9636534 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 133-281 |
| Cow position: | chr28:16204566-16204410 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 133-281 |
| Cow position: | chr28:16879500-16879354 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 58, 43 |
| Conread position: | 133-283 |
| Cow position: | chr28:8348885-8348729 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 133-283 |
| Cow position: | chr28:10172646-10172493 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 138 |
| Conread position: | 133-283 |
| Cow position: | chr28:16211329-16211171 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 133-284 |
| Cow position: | chr28:2862629-2862787 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 133-284 |
| Cow position: | chr28:8372238-8372396 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 133-284 |
| Cow position: | chr28:11752377-11752219 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 133-289 |
| Cow position: | chr28:4282724-4282563 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 46, 144 |
| Conread position: | 133-291 |
| Cow position: | chr28:3745969-3746134 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 133-291 |
| Cow position: | chr28:5817615-5817772 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 133-291 |
| Cow position: | chr28:8022343-8022181 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 50, 134 |
| Conread position: | 133-291 |
| Cow position: | chr28:12619330-12619497 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 133-291 |
| Cow position: | chr28:17738311-17738145 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 133-291 |
| Cow position: | chr28:20124553-20124712 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 46, 87 |
| Conread position: | 133-291 |
| Cow position: | chr28:20760156-20759991 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 133-291 |
| Cow position: | chr28:22345787-22345948 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 45, 32 |
| Conread position: | 133-291 |
| Cow position: | chr28:23410556-23410396 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 87 |
| Conread position: | 133-291 |
| Cow position: | chr28:24996820-24996660 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 31 |
| Conread position: | 133-291 |
| Cow position: | chr28:26340104-26340271 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 151 |
| Conread position: | 133-291 |
| Cow position: | chr28:31110237-31110075 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 133-291 |
| Cow position: | chr28:34082254-34082088 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 43, 109 |
| Conread position: | 133-293 |
| Cow position: | chr28:4914334-4914164 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 133-293 |
| Cow position: | chr28:5805293-5805448 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 133-293 |
| Cow position: | chr28:11585440-11585274 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 133-294 |
| Cow position: | chr28:26784699-26784533 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 82 |
| Conread position: | 133-300 |
| Cow position: | chr28:14657468-14657640 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 82 |
| Conread position: | 133-300 |
| Cow position: | chr28:15044087-15043924 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 58, 43 |
| Conread position: | 133-315 |
| Cow position: | chr28:33036698-33036510 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 80, 56 |
| Conread position: | 133-316 |
| Cow position: | chr28:10888431-10888627 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 133-321 |
| Cow position: | chr28:24646308-24646502 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 46, 159 |
| Conread position: | 133-324 |
| Cow position: | chr28:4938606-4938794 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 47, 62 |
| Conread position: | 133-324 |
| Cow position: | chr28:15272493-15272292 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 46, 82 |
| Conread position: | 133-342 |
| Cow position: | chr28:7751533-7751315 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 203 |
| Conread position: | 133-344 |
| Cow position: | chr28:16441155-16441357 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 59 |
| Conread position: | 133-349 |
| Cow position: | chr28:29434657-29434436 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 123 |
| Conread position: | 133-351 |
| Cow position: | chr28:9426574-9426357 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 116, 52 |
| Conread position: | 133-358 |
| Cow position: | chr28:4880496-4880266 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 46, 82 |
| Conread position: | 133-368 |
| Cow position: | chr28:5931121-5931370 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 46, 78 |
| Conread position: | 133-368 |
| Cow position: | chr28:13176911-13176667 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 46, 124 |
| Conread position: | 133-368 |
| Cow position: | chr28:22170950-22170695 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 46, 82 |
| Conread position: | 133-368 |
| Cow position: | chr28:28076640-28076405 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 87 |
| Conread position: | 133-369 |
| Cow position: | chr28:18139684-18139441 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 89 |
| Conread position: | 133-369 |
| Cow position: | chr28:19026235-19025990 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 47, 60 |
| Conread position: | 133-371 |
| Cow position: | chr28:16686800-16687045 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 47, 87 |
| Conread position: | 133-372 |
| Cow position: | chr28:4022150-4022407 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 206 |
| Conread position: | 133-377 |
| Cow position: | chr28:16243991-16243740 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 46, 72 |
| Conread position: | 133-377 |
| Cow position: | chr28:20313043-20313302 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 46, 38 |
| Conread position: | 134-287 |
| Cow position: | chr28:3480038-3480197 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 45, 88 |
| Conread position: | 134-291 |
| Cow position: | chr28:12430378-12430536 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 44, 79 |
| Conread position: | 134-291 |
| Cow position: | chr28:19080079-19079914 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 134-350 |
| Cow position: | chr28:33051789-33052028 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 134-368 |
| Cow position: | chr28:3078909-3078667 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 45, 81 |
| Conread position: | 134-368 |
| Cow position: | chr28:34878204-34877953 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 45, 79 |
| Conread position: | 135-284 |
| Cow position: | chr28:16919392-16919238 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 135-291 |
| Cow position: | chr28:3914479-3914640 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 44, 80 |
| Conread position: | 135-291 |
| Cow position: | chr28:12951202-12951358 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 44, 66 |
| Conread position: | 135-293 |
| Cow position: | chr28:14649118-14649279 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 44, 80 |
| Conread position: | 135-294 |
| Cow position: | chr28:23459914-23460083 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 135-323 |
| Cow position: | chr28:4841627-4841429 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 38, 158 |
| Conread position: | 135-351 |
| Cow position: | chr28:13693520-13693749 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 57 |
| Conread position: | 135-368 |
| Cow position: | chr28:2898765-2899003 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 44, 80 |
| Conread position: | 135-369 |
| Cow position: | chr28:7268166-7267928 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 44, 37 |
| Conread position: | 135-369 |
| Cow position: | chr28:18591040-18591286 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 135-369 |
| Cow position: | chr28:33884179-33884417 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 56, 88 |
| Conread position: | 136-264 |
| Cow position: | chr28:3408447-3408312 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 136-276 |
| Cow position: | chr28:23793531-23793391 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 10 |
| Conread position: | 136-284 |
| Cow position: | chr28:6971569-6971423 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 65, 52 |
| Conread position: | 136-284 |
| Cow position: | chr28:16450925-16450781 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 77, 39 |
| Conread position: | 136-289 |
| Cow position: | chr28:6307663-6307818 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 55, 14 |
| Conread position: | 136-289 |
| Cow position: | chr28:14933732-14933893 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 136-291 |
| Cow position: | chr28:4070739-4070898 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 42, 57 |
| Conread position: | 136-291 |
| Cow position: | chr28:7549292-7549131 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 117 |
| Conread position: | 136-291 |
| Cow position: | chr28:13267552-13267715 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 136-291 |
| Cow position: | chr28:16370304-16370147 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 77 |
| Conread position: | 136-291 |
| Cow position: | chr28:23675914-23676069 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 43, 83 |
| Conread position: | 136-291 |
| Cow position: | chr28:29199497-29199655 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 67 |
| Conread position: | 136-294 |
| Cow position: | chr28:3077763-3077921 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 42, 78 |
| Conread position: | 136-320 |
| Cow position: | chr28:2819529-2819725 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 42, 159 |
| Conread position: | 136-323 |
| Cow position: | chr28:19222827-19222627 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 42, 79 |
| Conread position: | 136-323 |
| Cow position: | chr28:21502165-21502363 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 43, 77 |
| Conread position: | 136-337 |
| Cow position: | chr28:15063569-15063357 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 136-347 |
| Cow position: | chr28:23839979-23840194 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 43, 57 |
| Conread position: | 136-350 |
| Cow position: | chr28:17029945-17029724 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 79 |
| Conread position: | 136-364 |
| Cow position: | chr28:7698212-7697968 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 43, 206 |
| Conread position: | 136-368 |
| Cow position: | chr28:750997-751241 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 136-368 |
| Cow position: | chr28:25399660-25399886 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 57 |
| Conread position: | 136-368 |
| Cow position: | chr28:26743392-26743640 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 42, 76 |
| Conread position: | 136-377 |
| Cow position: | chr28:7512821-7512559 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 206 |
| Conread position: | 136-377 |
| Cow position: | chr28:11786938-11786693 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 57 |
| Conread position: | 136-377 |
| Cow position: | chr28:21354995-21355256 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 43, 66 |
| Conread position: | 136-377 |
| Cow position: | chr28:22321192-22321446 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 42, 209 |
| Conread position: | 137-283 |
| Cow position: | chr28:3144120-3143970 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 42, 78 |
| Conread position: | 137-291 |
| Cow position: | chr28:15263953-15263788 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 137-291 |
| Cow position: | chr28:27218092-27218253 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 137-323 |
| Cow position: | chr28:11451695-11451494 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 75 |
| Conread position: | 137-350 |
| Cow position: | chr28:25424531-25424301 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 113 |
| Conread position: | 137-368 |
| Cow position: | chr28:16085096-16085339 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 138-291 |
| Cow position: | chr28:21868224-21868384 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 138-293 |
| Cow position: | chr28:5658326-5658482 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 55 |
| Conread position: | 138-340 |
| Cow position: | chr28:21844728-21844941 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 41, 207 |
| Conread position: | 138-368 |
| Cow position: | chr28:16253085-16252842 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 41, 77 |
| Conread position: | 138-376 |
| Cow position: | chr28:26922592-26922344 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 40, 77 |
| Conread position: | 139-376 |
| Cow position: | chr28:25727151-25727400 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 76 |
| Conread position: | 144-291 |
| Cow position: | chr28:2888208-2888360 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 108, 41 |
| Conread position: | 144-316 |
| Cow position: | chr28:11827272-11827451 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 68 |
| Conread position: | 144-368 |
| Cow position: | chr28:7228607-7228371 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 35, 206 |
| Conread position: | 145-291 |
| Cow position: | chr28:26684892-26685043 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 113 |
| Conread position: | 146-291 |
| Cow position: | chr28:8347515-8347660 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 33, 57 |
| Conread position: | 146-325 |
| Cow position: | chr28:7980638-7980449 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 146-350 |
| Cow position: | chr28:10053558-10053336 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 200 |
| Conread position: | 146-377 |
| Cow position: | chr28:19222365-19222126 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 33, 135 |
| Conread position: | 150-284 |
| Cow position: | chr28:4587881-4588021 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 150-358 |
| Cow position: | chr28:22371894-22371683 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 170 |
| Conread position: | 156-377 |
| Cow position: | chr28:25282995-25283223 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 121 |
| Conread position: | 178-291 |
| Cow position: | chr28:8935748-8935866 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 178-316 |
| Cow position: | chr28:11829128-11828983 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 178-337 |
| Cow position: | chr28:3000780-3000616 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 13, 147 |
| Conread position: | 178-372 |
| Cow position: | chr28:19023947-19024164 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.