Cow genome map
| Conread name: | rspl12_d20.y1 |
| Conread position: | 19-253 |
| Cow position: | chr29:34736828-34736585 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 175 |
| Conread position: | 19-264 |
| Cow position: | chr29:32912982-32912739 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 112 |
| Conread position: | 19-291 |
| Cow position: | chr29:11704760-11705045 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 46, 244 |
| Conread position: | 19-291 |
| Cow position: | chr29:27858432-27858716 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 46, 193 |
| Conread position: | 19-350 |
| Cow position: | chr29:43495689-43496034 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 46, 116 |
| Conread position: | 19-368 |
| Cow position: | chr29:17668124-17668498 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 258 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 25, 256 |
| Conread position: | 19-369 |
| Cow position: | chr29:4367356-4367734 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 259 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 45, 102 |
| Conread position: | 19-369 |
| Cow position: | chr29:13553764-13554149 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 20-272 |
| Cow position: | chr29:42939713-42939451 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 45, 199 |
| Conread position: | 20-308 |
| Cow position: | chr29:26130413-26130731 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 45, 259 |
| Conread position: | 21-276 |
| Cow position: | chr29:87392-87109 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 44, 160 |
| Conread position: | 22-261 |
| Cow position: | chr29:36109695-36109446 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 18, 145 |
| Conread position: | 23-377 |
| Cow position: | chr29:17470-17089 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 268 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 42, 86 |
| Conread position: | 23-377 |
| Cow position: | chr29:13639730-13639349 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 183 |
| Conread position: | 25-265 |
| Cow position: | chr29:24777653-24777411 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 69 |
| Conread position: | 25-321 |
| Cow position: | chr29:18212351-18212032 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 244 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 40, 15 |
| Conread position: | 27-293 |
| Cow position: | chr29:868428-868699 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 118 |
| Conread position: | 76-316 |
| Cow position: | chr29:7965946-7966195 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 40, 15 |
| Conread position: | 114-369 |
| Cow position: | chr29:4520078-4520348 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 65, 17 |
| Conread position: | 115-284 |
| Cow position: | chr29:23844578-23844750 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 65, 12 |
| Conread position: | 117-293 |
| Cow position: | chr29:19254080-19253896 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 100 |
| Conread position: | 127-325 |
| Cow position: | chr29:26986700-26986893 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 168, 19 |
| Conread position: | 130-323 |
| Cow position: | chr29:7041077-7040881 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 61, 48 |
| Conread position: | 130-350 |
| Cow position: | chr29:23874217-23874446 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 92 |
| Conread position: | 131-291 |
| Cow position: | chr29:2744513-2744350 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 48, 84 |
| Conread position: | 132-284 |
| Cow position: | chr29:26984988-26985143 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 132-291 |
| Cow position: | chr29:20903528-20903363 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 47, 124 |
| Conread position: | 132-291 |
| Cow position: | chr29:22162491-22162331 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 50, 88 |
| Conread position: | 132-293 |
| Cow position: | chr29:19389246-19389411 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 57, 81 |
| Conread position: | 132-320 |
| Cow position: | chr29:8164101-8163898 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 111 |
| Conread position: | 132-377 |
| Cow position: | chr29:11915576-11915845 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 47, 137 |
| Conread position: | 133-252 |
| Cow position: | chr29:45588712-45588590 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 68, 52 |
| Conread position: | 133-267 |
| Cow position: | chr29:25474668-25474809 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 133-268 |
| Cow position: | chr29:21665731-21665869 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 81 |
| Conread position: | 133-268 |
| Cow position: | chr29:29066187-29066325 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 46, 81 |
| Conread position: | 133-272 |
| Cow position: | chr29:5919564-5919415 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 133-275 |
| Cow position: | chr29:5046513-5046371 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 83 |
| Conread position: | 133-283 |
| Cow position: | chr29:4328195-4328338 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 133-283 |
| Cow position: | chr29:21000402-21000557 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 133-284 |
| Cow position: | chr29:15944330-15944488 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 133-284 |
| Cow position: | chr29:19756209-19756362 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 92 |
| Conread position: | 133-284 |
| Cow position: | chr29:29974802-29974958 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 135 |
| Conread position: | 133-291 |
| Cow position: | chr29:6217787-6217626 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 12, 58 |
| Conread position: | 133-291 |
| Cow position: | chr29:11562375-11562537 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 45, 100 |
| Conread position: | 133-291 |
| Cow position: | chr29:13372424-13372587 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 133-291 |
| Cow position: | chr29:19762033-19762198 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 133-291 |
| Cow position: | chr29:21933352-21933190 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 88 |
| Conread position: | 133-291 |
| Cow position: | chr29:26615964-26615800 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 133-291 |
| Cow position: | chr29:31926529-31926367 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 133-291 |
| Cow position: | chr29:31928740-31928903 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 31 |
| Conread position: | 133-291 |
| Cow position: | chr29:39111547-39111393 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 59 |
| Conread position: | 133-291 |
| Cow position: | chr29:41747201-41747366 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 79 |
| Conread position: | 133-294 |
| Cow position: | chr29:25088514-25088677 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 133-294 |
| Cow position: | chr29:40891941-40891771 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 133-312 |
| Cow position: | chr29:35434631-35434819 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 46, 162 |
| Conread position: | 133-321 |
| Cow position: | chr29:24119976-24119777 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 133-322 |
| Cow position: | chr29:40166003-40166202 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 133-323 |
| Cow position: | chr29:356087-356282 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 46, 82 |
| Conread position: | 133-324 |
| Cow position: | chr29:18748823-18748632 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 46, 9 |
| Conread position: | 133-326 |
| Cow position: | chr29:12784194-12783990 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 87 |
| Conread position: | 133-337 |
| Cow position: | chr29:18878740-18878523 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 44, 82 |
| Conread position: | 133-339 |
| Cow position: | chr29:36586339-36586555 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 46, 197 |
| Conread position: | 133-340 |
| Cow position: | chr29:17543211-17543422 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 82 |
| Conread position: | 133-341 |
| Cow position: | chr29:4804994-4805213 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 46, 87 |
| Conread position: | 133-348 |
| Cow position: | chr29:21236877-21237097 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 46, 196 |
| Conread position: | 133-350 |
| Cow position: | chr29:2644544-2644313 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 46, 9 |
| Conread position: | 133-350 |
| Cow position: | chr29:26017750-26017518 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 31 |
| Conread position: | 133-351 |
| Cow position: | chr29:4625232-4625010 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 57 |
| Conread position: | 133-351 |
| Cow position: | chr29:9686240-9686012 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 46, 59 |
| Conread position: | 133-351 |
| Cow position: | chr29:20933466-20933692 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 46, 196 |
| Conread position: | 133-367 |
| Cow position: | chr29:35738509-35738266 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 46, 198 |
| Conread position: | 133-368 |
| Cow position: | chr29:17409090-17409342 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 39, 93 |
| Conread position: | 133-368 |
| Cow position: | chr29:26734794-26735036 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 133-368 |
| Cow position: | chr29:32767760-32767525 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 87 |
| Conread position: | 133-369 |
| Cow position: | chr29:9911938-9912184 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 133-372 |
| Cow position: | chr29:34297804-34297556 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 45, 82 |
| Conread position: | 133-374 |
| Cow position: | chr29:29769585-29769337 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 133-376 |
| Cow position: | chr29:9638551-9638303 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 44, 60 |
| Conread position: | 133-377 |
| Cow position: | chr29:2522339-2522585 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 51, 56 |
| Conread position: | 133-377 |
| Cow position: | chr29:32799942-32799691 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 133-377 |
| Cow position: | chr29:35291860-35292110 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 48, 60 |
| Conread position: | 134-284 |
| Cow position: | chr29:40902957-40902805 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 45, 12 |
| Conread position: | 134-291 |
| Cow position: | chr29:1933795-1933632 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 81 |
| Conread position: | 134-291 |
| Cow position: | chr29:36530625-36530789 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 134-368 |
| Cow position: | chr29:9139170-9139429 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 45, 226 |
| Conread position: | 134-369 |
| Cow position: | chr29:26778646-26778891 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 147 |
| Conread position: | 135-284 |
| Cow position: | chr29:22714965-22714809 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 135-284 |
| Cow position: | chr29:34360031-34359887 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 135-290 |
| Cow position: | chr29:10456789-10456638 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 10 |
| Conread position: | 135-291 |
| Cow position: | chr29:6925782-6925934 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 43, 66 |
| Conread position: | 135-291 |
| Cow position: | chr29:28868395-28868558 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 135-304 |
| Cow position: | chr29:23984200-23984023 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 135-341 |
| Cow position: | chr29:4194358-4194141 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 104 |
| Conread position: | 135-350 |
| Cow position: | chr29:16195615-16195828 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 121, 192 |
| Conread position: | 135-367 |
| Cow position: | chr29:26263614-26263842 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 43, 79 |
| Conread position: | 135-368 |
| Cow position: | chr29:11696297-11696537 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 22 |
| Conread position: | 135-368 |
| Cow position: | chr29:29056947-29057186 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 56, 39 |
| Conread position: | 135-371 |
| Cow position: | chr29:24624012-24624260 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 43, 9 |
| Conread position: | 135-377 |
| Cow position: | chr29:16309513-16309759 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 58 |
| Conread position: | 136-251 |
| Cow position: | chr29:19949073-19949195 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 136-276 |
| Cow position: | chr29:13458822-13458966 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 79 |
| Conread position: | 136-284 |
| Cow position: | chr29:686428-686271 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 42, 79 |
| Conread position: | 136-284 |
| Cow position: | chr29:9709462-9709610 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 42, 57 |
| Conread position: | 136-284 |
| Cow position: | chr29:25737652-25737503 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 42, 84 |
| Conread position: | 136-289 |
| Cow position: | chr29:35501885-35501731 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 84 |
| Conread position: | 136-291 |
| Cow position: | chr29:4065851-4066008 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 31 |
| Conread position: | 136-291 |
| Cow position: | chr29:5098998-5098838 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 136-291 |
| Cow position: | chr29:16756818-16756981 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 136-291 |
| Cow position: | chr29:17109735-17109890 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 42, 77 |
| Conread position: | 136-293 |
| Cow position: | chr29:36216881-36217041 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 43, 84 |
| Conread position: | 136-300 |
| Cow position: | chr29:477866-478038 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 136-300 |
| Cow position: | chr29:24952449-24952619 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 43, 21 |
| Conread position: | 136-323 |
| Cow position: | chr29:6844866-6844666 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 43, 65 |
| Conread position: | 136-350 |
| Cow position: | chr29:4120609-4120840 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 43, 67 |
| Conread position: | 136-350 |
| Cow position: | chr29:36183039-36183267 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 55, 207 |
| Conread position: | 136-351 |
| Cow position: | chr29:18735879-18735653 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 93 |
| Conread position: | 136-351 |
| Cow position: | chr29:37961214-37960987 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 42, 79 |
| Conread position: | 136-368 |
| Cow position: | chr29:1395369-1395605 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 49 |
| Conread position: | 136-368 |
| Cow position: | chr29:41530613-41530857 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 43, 79 |
| Conread position: | 136-369 |
| Cow position: | chr29:39567451-39567694 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 43, 79 |
| Conread position: | 136-377 |
| Cow position: | chr29:37599441-37599194 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 78 |
| Conread position: | 137-283 |
| Cow position: | chr29:24103784-24103631 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 137-284 |
| Cow position: | chr29:5892611-5892763 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 42, 109 |
| Conread position: | 138-256 |
| Cow position: | chr29:22720893-22721017 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 41, 30 |
| Conread position: | 138-347 |
| Cow position: | chr29:3395876-3396091 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 40, 75 |
| Conread position: | 138-350 |
| Cow position: | chr29:34744851-34744634 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 41, 71 |
| Conread position: | 138-355 |
| Cow position: | chr29:19338745-19338982 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 41, 124 |
| Conread position: | 144-284 |
| Cow position: | chr29:40117340-40117483 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 97 |
| Conread position: | 144-291 |
| Cow position: | chr29:6286386-6286236 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 34, 78 |
| Conread position: | 144-323 |
| Cow position: | chr29:39642948-39643138 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 35, 62 |
| Conread position: | 144-377 |
| Cow position: | chr29:1229380-1229625 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 35, 180 |
| Conread position: | 145-293 |
| Cow position: | chr29:3502830-3502976 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 48 |
| Conread position: | 145-343 |
| Cow position: | chr29:14501363-14501572 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 34, 185 |
| Conread position: | 145-344 |
| Cow position: | chr29:35281273-35281478 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 34, 48 |
| Conread position: | 146-287 |
| Cow position: | chr29:43252914-43252768 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 79 |
| Conread position: | 146-291 |
| Cow position: | chr29:4480402-4480250 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 146-350 |
| Cow position: | chr29:2984658-2984877 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 34, 69 |
| Conread position: | 150-376 |
| Cow position: | chr29:2532839-2533076 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 30, 206 |
| Conread position: | 152-369 |
| Cow position: | chr29:463874-463646 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 27, 63 |
| Conread position: | 155-283 |
| Cow position: | chr29:40299230-40299096 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 73 |
| Conread position: | 156-291 |
| Cow position: | chr29:16657469-16657612 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 157-351 |
| Cow position: | chr29:14484761-14484565 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 23, 58 |
| Conread position: | 165-291 |
| Cow position: | chr29:41364902-41365034 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 58 |
| Conread position: | 165-350 |
| Cow position: | chr29:22778389-22778189 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 186 |
| Conread position: | 165-377 |
| Cow position: | chr29:11433919-11434137 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 90, 46 |
| Conread position: | 176-291 |
| Cow position: | chr29:32211254-32211134 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 204-350 |
| Cow position: | chr29:25432235-25432385 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 127 |
Show alignments to all cow chromosomes.