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Cow genome map

           
Conread name:
           
rspl12_d20.y1
        

               
Conread position:
               
8-377
               

               
Cow position:
               
chr6:46292681-46292286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
57, 200
               

               
Conread position:
               
17-377
               

               
Cow position:
               
chr6:53933190-53932789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
50, 8
               

               
Conread position:
               
19-189
               

               
Cow position:
               
chr6:7009401-7009577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
19-273
               

               
Cow position:
               
chr6:31535896-31535622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
46, 26
               

               
Conread position:
               
19-275
               

               
Cow position:
               
chr6:22215907-22215656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
68, 21
               

               
Conread position:
               
19-283
               

               
Cow position:
               
chr6:46283302-46283045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
46, 123
               

               
Conread position:
               
19-291
               

               
Cow position:
               
chr6:1886987-1886701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 186
               

               
Conread position:
               
19-291
               

               
Cow position:
               
chr6:47574589-47574869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
46, 117
               

               
Conread position:
               
19-294
               

               
Cow position:
               
chr6:63252239-63251955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
56, 127
               

               
Conread position:
               
19-342
               

               
Cow position:
               
chr6:24961826-24962163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
13, 59
               

               
Conread position:
               
19-366
               

               
Cow position:
               
chr6:17997625-17997272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
46, 26
               

               
Conread position:
               
19-368
               

               
Cow position:
               
chr6:34075686-34076078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
14, 186
               

               
Conread position:
               
20-284
               

               
Cow position:
               
chr6:29484773-29485046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
45, 141
               

               
Conread position:
               
21-368
               

               
Cow position:
               
chr6:15242516-15242883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 322
               

               
Conread position:
               
23-291
               

               
Cow position:
               
chr6:444991-445284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
32-368
               

               
Cow position:
               
chr6:5445321-5445672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
33, 93
               

               
Conread position:
               
34-368
               

               
Cow position:
               
chr6:19681841-19681476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
33, 236
               

               
Conread position:
               
66-291
               

               
Cow position:
               
chr6:59015824-59015595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
43, 52
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr6:62324745-62324956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 130
               

               
Conread position:
               
92-287
               

               
Cow position:
               
chr6:54991247-54991044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 157
               

               
Conread position:
               
111-377
               

               
Cow position:
               
chr6:6201222-6201484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
112-291
               

               
Cow position:
               
chr6:48187799-48187616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
124-368
               

               
Cow position:
               
chr6:59069834-59069575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
55, 9
               

               
Conread position:
               
127-284
               

               
Cow position:
               
chr6:2547039-2547202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
51, 17
               

               
Conread position:
               
127-377
               

               
Cow position:
               
chr6:62925196-62924938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 8
               

               
Conread position:
               
129-283
               

               
Cow position:
               
chr6:5114247-5114090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
129-377
               

               
Cow position:
               
chr6:7190321-7190059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 86
               

               
Conread position:
               
130-283
               

               
Cow position:
               
chr6:16706806-16706958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
49, 73
               

               
Conread position:
               
130-284
               

               
Cow position:
               
chr6:5609641-5609484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
49, 82
               

               
Conread position:
               
130-285
               

               
Cow position:
               
chr6:1002433-1002276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
130-285
               

               
Cow position:
               
chr6:13040254-13040414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
130-291
               

               
Cow position:
               
chr6:12927919-12928082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
48, 99
               

               
Conread position:
               
130-368
               

               
Cow position:
               
chr6:415894-416155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 16
               

               
Conread position:
               
131-249
               

               
Cow position:
               
chr6:6117749-6117629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
48, 84
               

               
Conread position:
               
131-292
               

               
Cow position:
               
chr6:24031175-24031343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
132-264
               

               
Cow position:
               
chr6:13741497-13741631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
47, 21
               

               
Conread position:
               
132-269
               

               
Cow position:
               
chr6:3719205-3719061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
132-272
               

               
Cow position:
               
chr6:21184757-21184902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
52, 74
               

               
Conread position:
               
132-281
               

               
Cow position:
               
chr6:10649217-10649071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
84, 20
               

               
Conread position:
               
132-284
               

               
Cow position:
               
chr6:9322960-9323118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 136
               

               
Conread position:
               
132-284
               

               
Cow position:
               
chr6:21542121-21542276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 90
               

               
Conread position:
               
132-284
               

               
Cow position:
               
chr6:31928076-31928221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
124, 47
               

               
Conread position:
               
132-291
               

               
Cow position:
               
chr6:388972-389133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
47, 39
               

               
Conread position:
               
132-291
               

               
Cow position:
               
chr6:21534860-21535019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
47, 71
               

               
Conread position:
               
132-293
               

               
Cow position:
               
chr6:1783971-1783812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
132-304
               

               
Cow position:
               
chr6:2896552-2896732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
47, 76
               

               
Conread position:
               
132-323
               

               
Cow position:
               
chr6:54293912-54294112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 53
               

               
Conread position:
               
132-341
               

               
Cow position:
               
chr6:17414650-17414428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
44, 200
               

               
Conread position:
               
132-355
               

               
Cow position:
               
chr6:8209788-8209563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
46, 88
               

               
Conread position:
               
133-249
               

               
Cow position:
               
chr6:15266465-15266345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
133-255
               

               
Cow position:
               
chr6:47150581-47150706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
46, 82
               

               
Conread position:
               
133-257
               

               
Cow position:
               
chr6:37331768-37331890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
80, 52
               

               
Conread position:
               
133-262
               

               
Cow position:
               
chr6:642775-642641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 125
               

               
Conread position:
               
133-268
               

               
Cow position:
               
chr6:22986188-22986049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
133-272
               

               
Cow position:
               
chr6:1770393-1770250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
133-272
               

               
Cow position:
               
chr6:14201500-14201649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
133-272
               

               
Cow position:
               
chr6:24902339-24902194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
133-272
               

               
Cow position:
               
chr6:65862488-65862636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
133-273
               

               
Cow position:
               
chr6:11829968-11830117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
133-279
               

               
Cow position:
               
chr6:60017870-60018018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
46, 61
               

               
Conread position:
               
133-280
               

               
Cow position:
               
chr6:35769680-35769530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
45, 82
               

               
Conread position:
               
133-283
               

               
Cow position:
               
chr6:36196016-36196169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
45, 82
               

               
Conread position:
               
133-283
               

               
Cow position:
               
chr6:49398814-49398659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
45, 70
               

               
Conread position:
               
133-284
               

               
Cow position:
               
chr6:242616-242766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
133-284
               

               
Cow position:
               
chr6:10106194-10106035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
133-284
               

               
Cow position:
               
chr6:23248161-23248003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
133-284
               

               
Cow position:
               
chr6:29210303-29210453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
42, 58
               

               
Conread position:
               
133-284
               

               
Cow position:
               
chr6:34235631-34235478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 71
               

               
Conread position:
               
133-284
               

               
Cow position:
               
chr6:46666906-46667068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
133-284
               

               
Cow position:
               
chr6:54132620-54132773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
45, 60
               

               
Conread position:
               
133-284
               

               
Cow position:
               
chr6:55608004-55607856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
46, 80
               

               
Conread position:
               
133-284
               

               
Cow position:
               
chr6:59620471-59620627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 82
               

               
Conread position:
               
133-285
               

               
Cow position:
               
chr6:21231338-21231488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
46, 80
               

               
Conread position:
               
133-286
               

               
Cow position:
               
chr6:6098480-6098326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 84
               

               
Conread position:
               
133-287
               

               
Cow position:
               
chr6:65676059-65676216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 132
               

               
Conread position:
               
133-287
               

               
Cow position:
               
chr6:65711629-65711786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 132
               

               
Conread position:
               
133-289
               

               
Cow position:
               
chr6:6343228-6343389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
133-290
               

               
Cow position:
               
chr6:38853856-38853694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
45, 146
               

               
Conread position:
               
133-290
               

               
Cow position:
               
chr6:66453603-66453762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
47, 57
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr6:899482-899327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 32
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr6:2012821-2012982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
44, 89
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr6:6460344-6460506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr6:8965892-8966054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr6:9008809-9008648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
46, 82
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr6:12500662-12500825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 92
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr6:33276841-33277006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr6:35842459-35842618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
82, 51
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr6:42961565-42961397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr6:47540328-47540494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 154
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr6:51398603-51398764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
46, 82
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr6:51581456-51581290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr6:51674720-51674876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
46, 78
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr6:53139127-53138958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr6:54430621-54430789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr6:61631817-61631645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr6:65870826-65870993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
46, 124
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr6:66131110-66131269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr6:69500132-69500287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
133-293
               

               
Cow position:
               
chr6:12623273-12623435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 18
               

               
Conread position:
               
133-293
               

               
Cow position:
               
chr6:46245521-46245352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
133-293
               

               
Cow position:
               
chr6:50746783-50746952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 40
               

               
Conread position:
               
133-293
               

               
Cow position:
               
chr6:61113552-61113722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
133-294
               

               
Cow position:
               
chr6:2607415-2607581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 123
               

               
Conread position:
               
133-294
               

               
Cow position:
               
chr6:42565488-42565655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
133-294
               

               
Cow position:
               
chr6:51463814-51463646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 145
               

               
Conread position:
               
133-294
               

               
Cow position:
               
chr6:54885111-54884944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 82
               

               
Conread position:
               
133-298
               

               
Cow position:
               
chr6:60350497-60350325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
133-300
               

               
Cow position:
               
chr6:28482817-28482992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
133-316
               

               
Cow position:
               
chr6:39994659-39994464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
133-323
               

               
Cow position:
               
chr6:10695671-10695871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
46, 27
               

               
Conread position:
               
133-324
               

               
Cow position:
               
chr6:65702599-65702397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
133-340
               

               
Cow position:
               
chr6:32121713-32121924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 82
               

               
Conread position:
               
133-344
               

               
Cow position:
               
chr6:9026319-9026533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
133-348
               

               
Cow position:
               
chr6:5095748-5095519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 78
               

               
Conread position:
               
133-348
               

               
Cow position:
               
chr6:8788235-8788011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 92
               

               
Conread position:
               
133-349
               

               
Cow position:
               
chr6:20231023-20230799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 23
               

               
Conread position:
               
133-349
               

               
Cow position:
               
chr6:56849820-56850044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
133-349
               

               
Cow position:
               
chr6:59597459-59597675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
45, 126
               

               
Conread position:
               
133-350
               

               
Cow position:
               
chr6:14949679-14949453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
46, 198
               

               
Conread position:
               
133-350
               

               
Cow position:
               
chr6:14958547-14958314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 215
               

               
Conread position:
               
133-350
               

               
Cow position:
               
chr6:23532465-23532685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
46, 107
               

               
Conread position:
               
133-350
               

               
Cow position:
               
chr6:38641300-38641525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
46, 87
               

               
Conread position:
               
133-350
               

               
Cow position:
               
chr6:54867313-54867545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
46, 37
               

               
Conread position:
               
133-351
               

               
Cow position:
               
chr6:48281797-48282020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 83
               

               
Conread position:
               
133-352
               

               
Cow position:
               
chr6:51835202-51835431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
133-352
               

               
Cow position:
               
chr6:59302023-59301796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
133-362
               

               
Cow position:
               
chr6:24515391-24515155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 82
               

               
Conread position:
               
133-367
               

               
Cow position:
               
chr6:10400093-10399857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
133-368
               

               
Cow position:
               
chr6:3952327-3952567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
133-368
               

               
Cow position:
               
chr6:5462246-5462011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
133-368
               

               
Cow position:
               
chr6:9375572-9375330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 166
               

               
Conread position:
               
133-368
               

               
Cow position:
               
chr6:15301015-15300780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 80
               

               
Conread position:
               
133-368
               

               
Cow position:
               
chr6:38614626-38614868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
133-368
               

               
Cow position:
               
chr6:47339547-47339307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
12, 79
               

               
Conread position:
               
133-369
               

               
Cow position:
               
chr6:25773579-25773335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 87
               

               
Conread position:
               
133-369
               

               
Cow position:
               
chr6:44194743-44194499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
133-369
               

               
Cow position:
               
chr6:58073847-58074100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
133-372
               

               
Cow position:
               
chr6:48344130-48344386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
45, 220
               

               
Conread position:
               
133-373
               

               
Cow position:
               
chr6:36202630-36202876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
45, 77
               

               
Conread position:
               
133-377
               

               
Cow position:
               
chr6:35181451-35181197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
45, 70
               

               
Conread position:
               
133-377
               

               
Cow position:
               
chr6:38218474-38218728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 80
               

               
Conread position:
               
133-377
               

               
Cow position:
               
chr6:41733429-41733686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
82, 184
               

               
Conread position:
               
133-377
               

               
Cow position:
               
chr6:66874164-66874411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 65
               

               
Conread position:
               
133-377
               

               
Cow position:
               
chr6:67950761-67951015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
134-284
               

               
Cow position:
               
chr6:24468589-24468435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
134-291
               

               
Cow position:
               
chr6:7103433-7103266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
134-291
               

               
Cow position:
               
chr6:15923196-15923036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 88
               

               
Conread position:
               
134-368
               

               
Cow position:
               
chr6:9751237-9751005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 81
               

               
Conread position:
               
134-368
               

               
Cow position:
               
chr6:57164233-57164478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
135-245
               

               
Cow position:
               
chr6:32024534-32024420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 90
               

               
Conread position:
               
135-264
               

               
Cow position:
               
chr6:33918047-33917911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
135-272
               

               
Cow position:
               
chr6:46860364-46860220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
135-281
               

               
Cow position:
               
chr6:21812534-21812684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 80
               

               
Conread position:
               
135-283
               

               
Cow position:
               
chr6:89104-88949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
135-284
               

               
Cow position:
               
chr6:7539378-7539531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
44, 80
               

               
Conread position:
               
135-289
               

               
Cow position:
               
chr6:41824022-41823860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
44, 135
               

               
Conread position:
               
135-291
               

               
Cow position:
               
chr6:16423503-16423663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 90
               

               
Conread position:
               
135-291
               

               
Cow position:
               
chr6:21110774-21110928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
135-291
               

               
Cow position:
               
chr6:21311954-21311785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
135-291
               

               
Cow position:
               
chr6:29239748-29239903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
116, 74
               

               
Conread position:
               
135-291
               

               
Cow position:
               
chr6:53651845-53652005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 148
               

               
Conread position:
               
135-291
               

               
Cow position:
               
chr6:64449197-64449355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
120, 77
               

               
Conread position:
               
135-293
               

               
Cow position:
               
chr6:40713698-40713535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
44, 93
               

               
Conread position:
               
135-300
               

               
Cow position:
               
chr6:25407588-25407418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
135-323
               

               
Cow position:
               
chr6:36011498-36011684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 58
               

               
Conread position:
               
135-344
               

               
Cow position:
               
chr6:53731325-53731546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
135-352
               

               
Cow position:
               
chr6:17090401-17090632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
44, 9
               

               
Conread position:
               
135-368
               

               
Cow position:
               
chr6:37199741-37199478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
135-369
               

               
Cow position:
               
chr6:36470759-36470512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
44, 85
               

               
Conread position:
               
135-377
               

               
Cow position:
               
chr6:47305143-47305401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 80
               

               
Conread position:
               
136-283
               

               
Cow position:
               
chr6:12845121-12845267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
128, 49
               

               
Conread position:
               
136-283
               

               
Cow position:
               
chr6:17068015-17067863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 86
               

               
Conread position:
               
136-283
               

               
Cow position:
               
chr6:18447704-18447555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 84
               

               
Conread position:
               
136-283
               

               
Cow position:
               
chr6:53460767-53460617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
136-284
               

               
Cow position:
               
chr6:10605490-10605644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
43, 122
               

               
Conread position:
               
136-284
               

               
Cow position:
               
chr6:10635981-10636127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
136-284
               

               
Cow position:
               
chr6:63720004-63720151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 59
               

               
Conread position:
               
136-291
               

               
Cow position:
               
chr6:7694549-7694385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
136-291
               

               
Cow position:
               
chr6:20605738-20605899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
43, 121
               

               
Conread position:
               
136-291
               

               
Cow position:
               
chr6:21456885-21456725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
136-291
               

               
Cow position:
               
chr6:23695802-23695957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 83
               

               
Conread position:
               
136-291
               

               
Cow position:
               
chr6:32210822-32210665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
43, 57
               

               
Conread position:
               
136-291
               

               
Cow position:
               
chr6:54864862-54864707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 75
               

               
Conread position:
               
136-291
               

               
Cow position:
               
chr6:60442223-60442382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
43, 57
               

               
Conread position:
               
136-293
               

               
Cow position:
               
chr6:19695611-19695772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
43, 76
               

               
Conread position:
               
136-300
               

               
Cow position:
               
chr6:130360-130189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
136-300
               

               
Cow position:
               
chr6:26728722-26728552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
43, 55
               

               
Conread position:
               
136-350
               

               
Cow position:
               
chr6:456991-457207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 84
               

               
Conread position:
               
136-350
               

               
Cow position:
               
chr6:16411000-16411219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 76
               

               
Conread position:
               
136-351
               

               
Cow position:
               
chr6:8562521-8562750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
54, 205
               

               
Conread position:
               
136-351
               

               
Cow position:
               
chr6:37467734-37467514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
136-366
               

               
Cow position:
               
chr6:40031998-40032238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
136-368
               

               
Cow position:
               
chr6:24781759-24781506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 206
               

               
Conread position:
               
136-368
               

               
Cow position:
               
chr6:44098889-44099136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
136-368
               

               
Cow position:
               
chr6:54369095-54368855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
136-369
               

               
Cow position:
               
chr6:12337789-12338043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
40, 79
               

               
Conread position:
               
136-369
               

               
Cow position:
               
chr6:38771100-38771335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 10
               

               
Conread position:
               
136-369
               

               
Cow position:
               
chr6:52248329-52248082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
136-372
               

               
Cow position:
               
chr6:67304606-67304859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 203
               

               
Conread position:
               
136-377
               

               
Cow position:
               
chr6:7824566-7824828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
136-377
               

               
Cow position:
               
chr6:38207691-38207430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
136-377
               

               
Cow position:
               
chr6:54140618-54140856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
43, 72
               

               
Conread position:
               
137-285
               

               
Cow position:
               
chr6:47519852-47520007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
137-291
               

               
Cow position:
               
chr6:3929126-3929281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
42, 28
               

               
Conread position:
               
137-291
               

               
Cow position:
               
chr6:36928457-36928618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
137-316
               

               
Cow position:
               
chr6:48567536-48567350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
42, 56
               

               
Conread position:
               
137-341
               

               
Cow position:
               
chr6:52025848-52025631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
42, 56
               

               
Conread position:
               
137-351
               

               
Cow position:
               
chr6:14850908-14850683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
42, 76
               

               
Conread position:
               
137-368
               

               
Cow position:
               
chr6:64431745-64431986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
137-377
               

               
Cow position:
               
chr6:10176497-10176240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
41, 88
               

               
Conread position:
               
138-283
               

               
Cow position:
               
chr6:44078328-44078472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
138-290
               

               
Cow position:
               
chr6:18988023-18988175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
138-290
               

               
Cow position:
               
chr6:53519816-53519661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 78
               

               
Conread position:
               
138-349
               

               
Cow position:
               
chr6:58076031-58076257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
138-350
               

               
Cow position:
               
chr6:4864733-4864519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 55
               

               
Conread position:
               
138-355
               

               
Cow position:
               
chr6:45690787-45690569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 154
               

               
Conread position:
               
138-368
               

               
Cow position:
               
chr6:607069-607310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
41, 197
               

               
Conread position:
               
138-372
               

               
Cow position:
               
chr6:62479359-62479106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
40, 90
               

               
Conread position:
               
138-377
               

               
Cow position:
               
chr6:60239585-60239335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 73
               

               
Conread position:
               
139-291
               

               
Cow position:
               
chr6:20098156-20098001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 83
               

               
Conread position:
               
139-312
               

               
Cow position:
               
chr6:19329949-19329762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
144-283
               

               
Cow position:
               
chr6:50577333-50577479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
144-291
               

               
Cow position:
               
chr6:6400761-6400914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 100
               

               
Conread position:
               
144-291
               

               
Cow position:
               
chr6:27110401-27110557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
144-291
               

               
Cow position:
               
chr6:52412667-52412824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
144-291
               

               
Cow position:
               
chr6:53178450-53178602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
144-339
               

               
Cow position:
               
chr6:6264456-6264662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 22
               

               
Conread position:
               
144-367
               

               
Cow position:
               
chr6:8804715-8804481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
35, 69
               

               
Conread position:
               
144-377
               

               
Cow position:
               
chr6:47799111-47799353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
34, 49
               

               
Conread position:
               
145-312
               

               
Cow position:
               
chr6:37246616-37246437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
145-372
               

               
Cow position:
               
chr6:5958207-5957974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
146-261
               

               
Cow position:
               
chr6:12116239-12116118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
32, 111
               

               
Conread position:
               
146-291
               

               
Cow position:
               
chr6:34475735-34475588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 29
               

               
Conread position:
               
146-325
               

               
Cow position:
               
chr6:45160477-45160290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
146-354
               

               
Cow position:
               
chr6:63272799-63272580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
32, 186
               

               
Conread position:
               
147-283
               

               
Cow position:
               
chr6:37603339-37603478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 46
               

               
Conread position:
               
147-291
               

               
Cow position:
               
chr6:15305398-15305544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
32, 46
               

               
Conread position:
               
147-344
               

               
Cow position:
               
chr6:33302228-33302425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
147-377
               

               
Cow position:
               
chr6:37149009-37149249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
148-350
               

               
Cow position:
               
chr6:11169521-11169728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
148-368
               

               
Cow position:
               
chr6:60057839-60057606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 74
               

               
Conread position:
               
152-365
               

               
Cow position:
               
chr6:18968952-18968734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
143, 40
               

               
Conread position:
               
152-377
               

               
Cow position:
               
chr6:582446-582212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
154-350
               

               
Cow position:
               
chr6:61137194-61137403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
24, 112
               

               
Conread position:
               
156-350
               

               
Cow position:
               
chr6:8125157-8125354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 37
               

               
Conread position:
               
157-291
               

               
Cow position:
               
chr6:60819341-60819479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
21, 65
               

               
Conread position:
               
160-368
               

               
Cow position:
               
chr6:15447379-15447149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
161-365
               

               
Cow position:
               
chr6:47355654-47355869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
18, 54
               

               
Conread position:
               
166-366
               

               
Cow position:
               
chr6:40834638-40834421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
13, 175
               

               
Conread position:
               
167-368
               

               
Cow position:
               
chr6:44984162-44984379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 174
               

               
Conread position:
               
169-369
               

               
Cow position:
               
chr6:12543095-12542880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 46
               

               
Conread position:
               
178-292
               

               
Cow position:
               
chr6:60739864-60739980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
13, 35
               

               
Conread position:
               
178-368
               

               
Cow position:
               
chr6:19446109-19446302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
178-377
               

               
Cow position:
               
chr6:4692135-4691915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
192-368
               

               
Cow position:
               
chr6:17313595-17313784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
21, 156
               
Show alignments to all cow chromosomes.