Cow genome map

Conread name: rspl12_d20.y1

Conread position: 8-293
Cow position: chrX:18247977-18248262 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 59, 123

Conread position: 16-216
Cow position: chrX:24318288-24318488 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 100

Conread position: 17-377
Cow position: chrX:42247531-42247135 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 228

Conread position: 19-253
Cow position: chrX:25966704-25966950 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 195

Conread position: 19-264
Cow position: chrX:15305609-15305364 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 66

Conread position: 19-287
Cow position: chrX:13177810-13177519 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 213
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 46, 216

Conread position: 19-291
Cow position: chrX:8869738-8869454 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 213
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 50, 246

Conread position: 19-291
Cow position: chrX:19019445-19019156 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 110

Conread position: 19-293
Cow position: chrX:17888734-17888466 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 208
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 101

Conread position: 19-316
Cow position: chrX:17794642-17794959 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 232
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 48, 212

Conread position: 19-336
Cow position: chrX:10438004-10437664 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 19-366
Cow position: chrX:11614368-11614732 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 257
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 46, 112

Conread position: 19-377
Cow position: chrX:29876404-29876028 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 267
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 44, 212

Conread position: 20-377
Cow position: chrX:24288265-24287884 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 269
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 45, 250

Conread position: 25-341
Cow position: chrX:15596698-15597043 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 243
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 40, 290

Conread position: 26-258
Cow position: chrX:17265392-17265160 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 39, 124

Conread position: 27-291
Cow position: chrX:37781430-37781161 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 107

Conread position: 40-291
Cow position: chrX:6234766-6234502 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 25, 32

Conread position: 45-253
Cow position: chrX:22122837-22122639 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 86

Conread position: 87-321
Cow position: chrX:1514658-1514421 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 47

Conread position: 115-368
Cow position: chrX:10831723-10831454 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 64, 12

Conread position: 116-291
Cow position: chrX:29542447-29542269 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 62, 99

Conread position: 125-291
Cow position: chrX:27174778-27174946 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 54, 17

Conread position: 125-351
Cow position: chrX:488270-488511 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 60, 78

Conread position: 130-369
Cow position: chrX:7646047-7646288 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 50, 5

Conread position: 130-377
Cow position: chrX:29602044-29601781 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 205
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 49, 5

Conread position: 131-284
Cow position: chrX:7695548-7695692 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 13

Conread position: 131-291
Cow position: chrX:15139758-15139595 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 22

Conread position: 131-291
Cow position: chrX:20151637-20151800 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 72

Conread position: 131-293
Cow position: chrX:8730866-8731039 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 131-350
Cow position: chrX:20752046-20752269 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 80

Conread position: 131-377
Cow position: chrX:5017621-5017364 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 47, 84

Conread position: 132-284
Cow position: chrX:7806167-7806325 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 36

Conread position: 132-291
Cow position: chrX:9635393-9635235 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 83

Conread position: 132-291
Cow position: chrX:16324176-16324014 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 47, 83

Conread position: 132-293
Cow position: chrX:17042478-17042645 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 121

Conread position: 132-294
Cow position: chrX:11655876-11656045 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 132-321
Cow position: chrX:4633063-4632862 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 47, 72

Conread position: 132-330
Cow position: chrX:27446476-27446694 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 94

Conread position: 132-350
Cow position: chrX:36975737-36975967 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 47, 90

Conread position: 133-263
Cow position: chrX:9252389-9252254 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 123

Conread position: 133-264
Cow position: chrX:17271500-17271362 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 60

Conread position: 133-264
Cow position: chrX:25337968-25338106 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 133-265
Cow position: chrX:7382112-7382247 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 46, 82

Conread position: 133-267
Cow position: chrX:25283357-25283224 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 78

Conread position: 133-269
Cow position: chrX:11674853-11674993 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 23, 83

Conread position: 133-272
Cow position: chrX:21064075-21064217 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 58, 71

Conread position: 133-272
Cow position: chrX:21663098-21663246 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 47, 24

Conread position: 133-272
Cow position: chrX:42499240-42499095 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 120
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 133-277
Cow position: chrX:48536876-48536726 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 19

Conread position: 133-281
Cow position: chrX:42086650-42086803 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 46, 124

Conread position: 133-283
Cow position: chrX:619219-619062 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 130
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 0

Conread position: 133-283
Cow position: chrX:4942961-4942812 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 46, 60

Conread position: 133-283
Cow position: chrX:9416904-9416751 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 47, 60

Conread position: 133-283
Cow position: chrX:35542680-35542837 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 128
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 133-283
Cow position: chrX:38006979-38006822 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 133-284
Cow position: chrX:7508928-7509085 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 133-284
Cow position: chrX:48195252-48195094 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 133-286
Cow position: chrX:32978467-32978306 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 54

Conread position: 133-289
Cow position: chrX:20697819-20697656 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 59

Conread position: 133-291
Cow position: chrX:2206755-2206600 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 79

Conread position: 133-291
Cow position: chrX:3579735-3579896 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 12

Conread position: 133-291
Cow position: chrX:6544045-6544206 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 82

Conread position: 133-291
Cow position: chrX:7571695-7571853 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 87

Conread position: 133-291
Cow position: chrX:8899813-8899980 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 133-291
Cow position: chrX:13647995-13647835 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 60

Conread position: 133-291
Cow position: chrX:14884173-14884008 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 133-291
Cow position: chrX:14924789-14924951 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 47, 31

Conread position: 133-291
Cow position: chrX:15485839-15485674 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 83

Conread position: 133-291
Cow position: chrX:17662808-17662643 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 134
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 0

Conread position: 133-291
Cow position: chrX:21672340-21672506 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 133-291
Cow position: chrX:23514229-23514065 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 28

Conread position: 133-291
Cow position: chrX:26440991-26440828 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 95

Conread position: 133-291
Cow position: chrX:30963083-30962923 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 46, 60

Conread position: 133-291
Cow position: chrX:33466402-33466560 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 70

Conread position: 133-291
Cow position: chrX:33855444-33855283 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 83

Conread position: 133-291
Cow position: chrX:34401786-34401948 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 72

Conread position: 133-291
Cow position: chrX:34502709-34502872 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 46, 11

Conread position: 133-291
Cow position: chrX:36283134-36283302 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 133-291
Cow position: chrX:37232198-37232363 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 133-291
Cow position: chrX:37843509-37843673 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 46, 60

Conread position: 133-291
Cow position: chrX:40557887-40557731 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 60

Conread position: 133-291
Cow position: chrX:41403761-41403929 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 133-291
Cow position: chrX:41410309-41410477 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 133-291
Cow position: chrX:42470148-42469992 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 46, 78

Conread position: 133-291
Cow position: chrX:42855197-42855365 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 137
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 46, 0

Conread position: 133-291
Cow position: chrX:46722952-46722784 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 133-293
Cow position: chrX:20709860-20710027 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 133-293
Cow position: chrX:21593072-21593240 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 133-293
Cow position: chrX:32020333-32020167 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 46, 82

Conread position: 133-294
Cow position: chrX:3654393-3654561 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 133-294
Cow position: chrX:27432130-27431961 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 133-294
Cow position: chrX:27516321-27516482 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 82

Conread position: 133-294
Cow position: chrX:28847090-28846928 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 45, 80

Conread position: 133-294
Cow position: chrX:42381311-42381149 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 87

Conread position: 133-298
Cow position: chrX:6488375-6488534 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 60

Conread position: 133-316
Cow position: chrX:25816107-25815924 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 70

Conread position: 133-321
Cow position: chrX:15814886-15815074 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 60

Conread position: 133-322
Cow position: chrX:40567388-40567592 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 133-323
Cow position: chrX:37489519-37489714 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 78

Conread position: 133-323
Cow position: chrX:42339147-42338955 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 46, 79

Conread position: 133-324
Cow position: chrX:19188725-19188930 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 100

Conread position: 133-324
Cow position: chrX:20582819-20583012 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 87

Conread position: 133-324
Cow position: chrX:27514657-27514861 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 46, 156

Conread position: 133-325
Cow position: chrX:22074589-22074786 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 46, 82

Conread position: 133-325
Cow position: chrX:41673892-41674103 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 133-326
Cow position: chrX:12980042-12979845 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 46, 172

Conread position: 133-336
Cow position: chrX:24105415-24105627 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 47, 82

Conread position: 133-338
Cow position: chrX:45501937-45502150 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 147

Conread position: 133-342
Cow position: chrX:29509655-29509431 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 82

Conread position: 133-342
Cow position: chrX:41884629-41884405 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 216

Conread position: 133-343
Cow position: chrX:38439262-38439489 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 133-348
Cow position: chrX:7721773-7722005 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 46, 214

Conread position: 133-348
Cow position: chrX:42994403-42994626 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 178
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 58, 203

Conread position: 133-349
Cow position: chrX:11717991-11717769 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 46, 9

Conread position: 133-349
Cow position: chrX:28866204-28865989 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 46, 57

Conread position: 133-350
Cow position: chrX:151690-151920 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 51, 207

Conread position: 133-350
Cow position: chrX:11633467-11633697 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 46, 82

Conread position: 133-350
Cow position: chrX:17497885-17498100 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 45, 71

Conread position: 133-350
Cow position: chrX:41198893-41199121 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 80, 89

Conread position: 133-350
Cow position: chrX:42461957-42461729 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 45, 206

Conread position: 133-351
Cow position: chrX:23564008-23563776 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 46, 204

Conread position: 133-351
Cow position: chrX:31949142-31948920 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 88

Conread position: 133-351
Cow position: chrX:36840662-36840889 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 46, 11

Conread position: 133-365
Cow position: chrX:34192466-34192703 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 34

Conread position: 133-366
Cow position: chrX:37119388-37119630 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 55

Conread position: 133-368
Cow position: chrX:5872102-5872353 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 46, 210

Conread position: 133-368
Cow position: chrX:10412197-10411950 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 188
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 16

Conread position: 133-368
Cow position: chrX:14599318-14599573 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 194

Conread position: 133-368
Cow position: chrX:22624270-22624512 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 46, 39

Conread position: 133-368
Cow position: chrX:27394225-27393990 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 81

Conread position: 133-368
Cow position: chrX:33639760-33640011 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 76

Conread position: 133-368
Cow position: chrX:35268679-35268901 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 46, 34

Conread position: 133-368
Cow position: chrX:38963898-38964144 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 188
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 9

Conread position: 133-369
Cow position: chrX:126581-126809 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 46, 92

Conread position: 133-369
Cow position: chrX:1616259-1616004 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 220

Conread position: 133-369
Cow position: chrX:2186047-2186291 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 123

Conread position: 133-369
Cow position: chrX:23091670-23091907 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 46, 82

Conread position: 133-369
Cow position: chrX:32623371-32623608 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 46, 152

Conread position: 133-369
Cow position: chrX:35288449-35288695 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 79

Conread position: 133-369
Cow position: chrX:37910241-37910482 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 80, 63

Conread position: 133-369
Cow position: chrX:44053047-44053297 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 46, 65

Conread position: 133-371
Cow position: chrX:19015231-19015476 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 85

Conread position: 133-376
Cow position: chrX:32171093-32170849 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 68

Conread position: 133-377
Cow position: chrX:841947-842204 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 60

Conread position: 133-377
Cow position: chrX:26625888-26625624 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 198
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 46, 222

Conread position: 133-377
Cow position: chrX:27509231-27508975 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 46, 82

Conread position: 133-377
Cow position: chrX:35413421-35413663 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 60

Conread position: 133-377
Cow position: chrX:35681134-35681389 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 195
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 52

Conread position: 133-377
Cow position: chrX:38549237-38549494 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 132

Conread position: 134-283
Cow position: chrX:46430068-46429916 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 44, 81

Conread position: 134-284
Cow position: chrX:37836377-37836532 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 91

Conread position: 134-291
Cow position: chrX:11806227-11806063 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 32

Conread position: 134-291
Cow position: chrX:38967440-38967598 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 44, 59

Conread position: 134-293
Cow position: chrX:13265830-13265671 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 45, 81

Conread position: 134-348
Cow position: chrX:35284413-35284638 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 44, 67

Conread position: 134-369
Cow position: chrX:11073399-11073154 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 68

Conread position: 134-376
Cow position: chrX:39558557-39558302 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 44, 81

Conread position: 134-377
Cow position: chrX:42585279-42585033 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 44, 57

Conread position: 135-281
Cow position: chrX:31436272-31436418 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 18, 59

Conread position: 135-284
Cow position: chrX:47248995-47248841 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 93

Conread position: 135-290
Cow position: chrX:25036909-25036746 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 43, 93

Conread position: 135-291
Cow position: chrX:34532319-34532471 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 43, 69

Conread position: 135-291
Cow position: chrX:35388115-35387952 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 135-291
Cow position: chrX:40035653-40035493 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 44, 10

Conread position: 135-291
Cow position: chrX:45015377-45015529 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 43, 58

Conread position: 135-294
Cow position: chrX:6639916-6640083 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 44, 58

Conread position: 135-300
Cow position: chrX:7718645-7718815 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 44, 108

Conread position: 135-300
Cow position: chrX:9425951-9425781 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 0

Conread position: 135-323
Cow position: chrX:8925496-8925692 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 76

Conread position: 135-324
Cow position: chrX:13912871-13913059 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 43, 85

Conread position: 135-325
Cow position: chrX:678777-678579 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 44, 110

Conread position: 135-347
Cow position: chrX:21004474-21004696 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 44, 9

Conread position: 135-368
Cow position: chrX:13382116-13382367 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 214

Conread position: 135-369
Cow position: chrX:18695129-18694890 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 44, 76

Conread position: 135-369
Cow position: chrX:46073030-46072780 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 44, 92

Conread position: 135-377
Cow position: chrX:4269277-4269020 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 18, 81

Conread position: 135-377
Cow position: chrX:15007360-15007102 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 197
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 44, 55

Conread position: 135-377
Cow position: chrX:16762563-16762818 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 44, 57

Conread position: 136-238
Cow position: chrX:29193799-29193904 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 54

Conread position: 136-271
Cow position: chrX:25237968-25238107 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 87

Conread position: 136-272
Cow position: chrX:33020277-33020419 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 79

Conread position: 136-279
Cow position: chrX:45430225-45430078 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 84

Conread position: 136-284
Cow position: chrX:33493566-33493720 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 133

Conread position: 136-284
Cow position: chrX:38852988-38853141 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 136-284
Cow position: chrX:46532718-46532558 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 136-290
Cow position: chrX:15147395-15147238 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 43, 78

Conread position: 136-291
Cow position: chrX:9997542-9997385 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 57

Conread position: 136-291
Cow position: chrX:11589801-11589637 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 19, 61

Conread position: 136-291
Cow position: chrX:21665802-21665642 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 43, 79

Conread position: 136-291
Cow position: chrX:36778199-36778362 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 136-291
Cow position: chrX:40452421-40452259 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 136-291
Cow position: chrX:47481591-47481752 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 76

Conread position: 136-293
Cow position: chrX:38094734-38094569 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 136-321
Cow position: chrX:42492723-42492528 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 155
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 43, 79

Conread position: 136-344
Cow position: chrX:7497035-7497252 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 84

Conread position: 136-344
Cow position: chrX:23061245-23061449 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 83

Conread position: 136-350
Cow position: chrX:23970180-23970394 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 43, 68

Conread position: 136-350
Cow position: chrX:28097916-28098130 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 77, 53

Conread position: 136-350
Cow position: chrX:34543579-34543799 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 78

Conread position: 136-350
Cow position: chrX:40647769-40648001 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 111

Conread position: 136-351
Cow position: chrX:17541755-17541976 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 43, 97

Conread position: 136-368
Cow position: chrX:1503130-1503375 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 86

Conread position: 136-368
Cow position: chrX:2467671-2467914 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 204

Conread position: 136-368
Cow position: chrX:6278714-6278462 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 188
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 42, 207

Conread position: 136-368
Cow position: chrX:11082822-11082586 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 57

Conread position: 136-368
Cow position: chrX:19930447-19930689 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 43, 79

Conread position: 136-368
Cow position: chrX:30421148-30420904 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 204

Conread position: 136-368
Cow position: chrX:32128189-32127956 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 57

Conread position: 136-368
Cow position: chrX:41743704-41743950 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 45, 77

Conread position: 136-368
Cow position: chrX:42171508-42171258 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 181
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 43, 214

Conread position: 136-368
Cow position: chrX:42874769-42875019 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 192
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 43, 213

Conread position: 136-369
Cow position: chrX:14900930-14900693 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 43, 86

Conread position: 136-369
Cow position: chrX:17631011-17630766 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 77

Conread position: 136-369
Cow position: chrX:32309897-32310142 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 164
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 136-377
Cow position: chrX:8797039-8797303 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 43, 0

Conread position: 136-377
Cow position: chrX:19690009-19690262 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 43, 172

Conread position: 136-377
Cow position: chrX:20887853-20887592 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 78

Conread position: 136-377
Cow position: chrX:34441659-34441405 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 43, 28

Conread position: 136-377
Cow position: chrX:41122863-41123108 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 77, 46

Conread position: 137-283
Cow position: chrX:26876089-26875941 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 42, 19

Conread position: 137-283
Cow position: chrX:46672814-46672662 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 79

Conread position: 137-291
Cow position: chrX:35273144-35273305 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 28, 149

Conread position: 137-291
Cow position: chrX:40183557-40183393 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 137-291
Cow position: chrX:43049137-43049299 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 137-294
Cow position: chrX:32420011-32420173 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 64

Conread position: 137-294
Cow position: chrX:46315588-46315424 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 137-323
Cow position: chrX:4044058-4043869 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 42, 88

Conread position: 137-343
Cow position: chrX:35609779-35610000 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 137-350
Cow position: chrX:23497872-23497652 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 175
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 41, 76

Conread position: 137-351
Cow position: chrX:38935074-38935296 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 204

Conread position: 137-368
Cow position: chrX:27680194-27680434 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 83

Conread position: 137-369
Cow position: chrX:26285772-26286018 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 42, 78

Conread position: 137-369
Cow position: chrX:31443029-31442792 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 42, 78

Conread position: 137-377
Cow position: chrX:7351092-7351347 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 76, 221

Conread position: 137-377
Cow position: chrX:28845638-28845880 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 121, 74

Conread position: 138-284
Cow position: chrX:6607213-6607365 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 47, 119

Conread position: 138-347
Cow position: chrX:46587611-46587834 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 82

Conread position: 139-291
Cow position: chrX:39938728-39938573 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 117

Conread position: 139-350
Cow position: chrX:41167170-41166947 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 76

Conread position: 139-377
Cow position: chrX:35409460-35409703 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 115, 45

Conread position: 143-294
Cow position: chrX:17725773-17725927 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 36, 71

Conread position: 144-281
Cow position: chrX:38642057-38642204 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 144-283
Cow position: chrX:9201346-9201492 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 55

Conread position: 144-284
Cow position: chrX:22482889-22482743 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 144-291
Cow position: chrX:12249606-12249752 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 44, 75

Conread position: 144-291
Cow position: chrX:16541878-16541721 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 144-321
Cow position: chrX:15545694-15545881 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 144-351
Cow position: chrX:22812860-22813083 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 193

Conread position: 144-367
Cow position: chrX:17908484-17908253 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 181
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 34, 63

Conread position: 144-368
Cow position: chrX:1499469-1499701 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 67

Conread position: 144-369
Cow position: chrX:917572-917331 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 129

Conread position: 144-377
Cow position: chrX:1176183-1175935 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 145-284
Cow position: chrX:11844442-11844301 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 111, 66

Conread position: 145-291
Cow position: chrX:30833045-30832897 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 124
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 80

Conread position: 145-321
Cow position: chrX:4091448-4091637 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 145-350
Cow position: chrX:41879134-41878915 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 33, 195

Conread position: 145-377
Cow position: chrX:27772159-27771918 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 27

Conread position: 146-275
Cow position: chrX:5900259-5900389 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 80

Conread position: 146-275
Cow position: chrX:29545078-29544943 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 146-284
Cow position: chrX:29770377-29770230 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 146-350
Cow position: chrX:34238522-34238734 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 33, 69

Conread position: 147-284
Cow position: chrX:40809489-40809632 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 32, 68

Conread position: 147-350
Cow position: chrX:33000706-33000920 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 95

Conread position: 147-367
Cow position: chrX:34270209-34270437 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 60

Conread position: 147-377
Cow position: chrX:36355925-36356159 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 139, 35

Conread position: 147-377
Cow position: chrX:36961438-36961688 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 198

Conread position: 149-351
Cow position: chrX:40116226-40116433 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 31, 66

Conread position: 150-283
Cow position: chrX:7513320-7513456 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 65

Conread position: 154-291
Cow position: chrX:23785463-23785612 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 154-300
Cow position: chrX:31311835-31311988 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 155-350
Cow position: chrX:31252228-31252432 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 24, 35

Conread position: 164-283
Cow position: chrX:7336646-7336771 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 15, 53

Conread position: 164-370
Cow position: chrX:32820849-32821067 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 15, 9

Conread position: 178-369
Cow position: chrX:4398961-4399162 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 128

Conread position: 178-377
Cow position: chrX:6407384-6407591 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 13, 146

Conread position: 191-369
Cow position: chrX:29680409-29680224 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 91, 20

Conread position: 211-368
Cow position: chrX:41027027-41027195 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 41

Show alignments to all cow chromosomes.