Cow genome map

Conread name: rspl22_e17.y1

Conread position: 1-142
Cow position: chr16:49170991-49170856 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 1-162
Cow position: chr16:54323223-54323068 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 85, 0

Conread position: 1-177
Cow position: chr16:16538876-16539043 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 1-185
Cow position: chr16:22799573-22799385 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 95

Conread position: 1-186
Cow position: chr16:3144302-3144123 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 153
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 85, 0

Conread position: 1-219
Cow position: chr16:18495652-18495443 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 173
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 201, 85

Conread position: 1-236
Cow position: chr16:4962854-4962626 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 15, 80

Conread position: 1-237
Cow position: chr16:1434293-1434523 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 86

Conread position: 1-241
Cow position: chr16:1565580-1565346 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 1-252
Cow position: chr16:46224483-46224241 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 243, 96

Conread position: 1-262
Cow position: chr16:41161373-41161106 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-267
Cow position: chr16:23097068-23096807 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 85

Conread position: 1-267
Cow position: chr16:23098437-23098698 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 85

Conread position: 1-269
Cow position: chr16:23790187-23790457 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 178
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 111, 0

Conread position: 1-306
Cow position: chr16:7083743-7084050 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 87

Conread position: 1-310
Cow position: chr16:16238728-16238416 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-321
Cow position: chr16:46520952-46520623 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 89

Conread position: 1-341
Cow position: chr16:54175495-54175832 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-349
Cow position: chr16:44668711-44668372 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 237
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 14, 78

Conread position: 1-353
Cow position: chr16:23364815-23364466 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 98

Conread position: 1-353
Cow position: chr16:25742852-25743188 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 244
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 243, 100

Conread position: 1-355
Cow position: chr16:4846560-4846215 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 141, 10

Conread position: 1-360
Cow position: chr16:37443427-37443082 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 275, 56

Conread position: 1-365
Cow position: chr16:15410968-15410604 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 100

Conread position: 1-366
Cow position: chr16:5633219-5632875 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 258
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 243, 83

Conread position: 1-366
Cow position: chr16:6945354-6945720 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 86

Conread position: 1-366
Cow position: chr16:23249893-23249509 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 85

Conread position: 1-367
Cow position: chr16:29049528-29049893 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-381
Cow position: chr16:16960766-16960388 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 256
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 26

Conread position: 1-383
Cow position: chr16:25955481-25955101 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 100

Conread position: 1-411
Cow position: chr16:9416459-9416056 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 99

Conread position: 1-442
Cow position: chr16:10966137-10965692 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 46

Conread position: 1-443
Cow position: chr16:15178785-15179226 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 44

Conread position: 1-455
Cow position: chr16:25260221-25260689 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 99

Conread position: 1-467
Cow position: chr16:55591879-55591402 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-483
Cow position: chr16:19887120-19887612 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 100

Conread position: 1-501
Cow position: chr16:12535842-12535336 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 97

Conread position: 1-502
Cow position: chr16:658058-658573 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 21

Conread position: 1-502
Cow position: chr16:839380-839890 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-503
Cow position: chr16:41624561-41624066 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 55

Conread position: 1-511
Cow position: chr16:49219858-49219325 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 45

Conread position: 1-512
Cow position: chr16:3010932-3011461 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 100

Conread position: 1-512
Cow position: chr16:11054093-11054614 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 99

Conread position: 1-512
Cow position: chr16:28168221-28167696 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 31

Conread position: 1-512
Cow position: chr16:34532391-34532917 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 37

Conread position: 1-512
Cow position: chr16:37146073-37146600 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-512
Cow position: chr16:44127742-44127233 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 32

Conread position: 1-512
Cow position: chr16:47476111-47476596 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 335
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 276, 15

Conread position: 1-512
Cow position: chr16:53991060-53991578 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 37

Conread position: 1-556
Cow position: chr16:24210301-24209743 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-561
Cow position: chr16:15812165-15812727 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 74

Conread position: 1-561
Cow position: chr16:24407007-24407570 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 74

Conread position: 1-562
Cow position: chr16:26653766-26654322 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 81

Conread position: 1-564
Cow position: chr16:34596-35173 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 85

Conread position: 1-564
Cow position: chr16:20204097-20204666 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 85

Conread position: 1-564
Cow position: chr16:41164674-41164111 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 46

Conread position: 1-570
Cow position: chr16:416990-417564 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 85

Conread position: 1-570
Cow position: chr16:2725126-2724555 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr16:3148934-3148371 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 97

Conread position: 1-570
Cow position: chr16:3332007-3332572 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 86

Conread position: 1-570
Cow position: chr16:3769914-3769342 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 85

Conread position: 1-570
Cow position: chr16:3819461-3820036 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 63

Conread position: 1-570
Cow position: chr16:4426187-4426759 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr16:4756120-4756692 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 30

Conread position: 1-570
Cow position: chr16:7466710-7467279 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 85

Conread position: 1-570
Cow position: chr16:7674363-7673792 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 19

Conread position: 1-570
Cow position: chr16:10440336-10440908 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr16:11633747-11633175 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 31

Conread position: 1-570
Cow position: chr16:12161183-12160614 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr16:14352584-14352015 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 31

Conread position: 1-570
Cow position: chr16:14663010-14662439 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 10

Conread position: 1-570
Cow position: chr16:15187163-15187733 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 87

Conread position: 1-570
Cow position: chr16:15494556-15495123 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 10

Conread position: 1-570
Cow position: chr16:15569866-15570439 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 32

Conread position: 1-570
Cow position: chr16:15980281-15979709 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 85

Conread position: 1-570
Cow position: chr16:16150652-16150079 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 86

Conread position: 1-570
Cow position: chr16:16539507-16540079 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 29

Conread position: 1-570
Cow position: chr16:18974962-18975537 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 88

Conread position: 1-570
Cow position: chr16:20377558-20378114 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 98

Conread position: 1-570
Cow position: chr16:21189354-21189927 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr16:23985407-23985982 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 85

Conread position: 1-570
Cow position: chr16:25344074-25344648 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr16:25443973-25444545 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 86

Conread position: 1-570
Cow position: chr16:25455366-25454792 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 98

Conread position: 1-570
Cow position: chr16:26990851-26990271 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 161

Conread position: 1-570
Cow position: chr16:27731285-27730712 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr16:28194204-28193632 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr16:31586599-31586033 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 30

Conread position: 1-570
Cow position: chr16:37478764-37478192 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 31

Conread position: 1-570
Cow position: chr16:40294074-40293501 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 98

Conread position: 1-570
Cow position: chr16:41033399-41033969 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 19

Conread position: 1-570
Cow position: chr16:42074792-42074229 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 10

Conread position: 1-570
Cow position: chr16:43895166-43894592 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 85

Conread position: 1-570
Cow position: chr16:47403480-47404049 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr16:50713320-50712770 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 31

Conread position: 1-570
Cow position: chr16:51086879-51087452 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 85

Conread position: 1-570
Cow position: chr16:52526328-52526900 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 85

Conread position: 1-571
Cow position: chr16:46102520-46101949 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-571
Cow position: chr16:53611904-53612471 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 30

Conread position: 2-244
Cow position: chr16:41573504-41573751 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 104

Conread position: 2-262
Cow position: chr16:25039999-25040246 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 242, 99

Conread position: 2-275
Cow position: chr16:28433996-28433742 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 2-338
Cow position: chr16:44661829-44662156 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 226
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 242, 99

Conread position: 2-366
Cow position: chr16:17111349-17111712 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 84

Conread position: 2-467
Cow position: chr16:11007089-11006608 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 99

Conread position: 2-485
Cow position: chr16:42080511-42080020 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 335
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 172, 99

Conread position: 2-502
Cow position: chr16:42117852-42118356 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 99

Conread position: 2-570
Cow position: chr16:193836-193269 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 30

Conread position: 2-570
Cow position: chr16:8872333-8871774 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 82

Conread position: 2-570
Cow position: chr16:18694871-18694298 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 29

Conread position: 2-570
Cow position: chr16:21017657-21018228 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 70

Conread position: 2-570
Cow position: chr16:39474928-39475497 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 195

Conread position: 2-570
Cow position: chr16:45704694-45704128 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 87

Conread position: 2-571
Cow position: chr16:45755514-45754956 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 100

Conread position: 3-162
Cow position: chr16:10373568-10373415 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 3-192
Cow position: chr16:27711079-27710892 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 77, 8

Conread position: 3-203
Cow position: chr16:16230411-16230605 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 37, 97

Conread position: 3-235
Cow position: chr16:20968701-20968475 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 3-333
Cow position: chr16:44675567-44675874 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 225
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 113, 15

Conread position: 3-512
Cow position: chr16:20642586-20643111 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 85

Conread position: 3-512
Cow position: chr16:29157748-29158240 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 29

Conread position: 3-562
Cow position: chr16:16031993-16032545 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 83

Conread position: 3-569
Cow position: chr16:2408796-2408224 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 83

Conread position: 3-570
Cow position: chr16:236598-237146 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 83

Conread position: 3-570
Cow position: chr16:5526007-5525430 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 83

Conread position: 5-296
Cow position: chr16:3031400-3031105 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 146

Conread position: 5-568
Cow position: chr16:16267796-16267233 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 37

Conread position: 5-570
Cow position: chr16:8814000-8813436 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 52

Conread position: 6-134
Cow position: chr16:1958539-1958417 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 6-219
Cow position: chr16:3349055-3349262 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 81

Conread position: 6-482
Cow position: chr16:48496037-48495543 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 99

Conread position: 6-512
Cow position: chr16:2394471-2394985 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 80

Conread position: 6-564
Cow position: chr16:4462210-4461649 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 80

Conread position: 6-568
Cow position: chr16:31425156-31425725 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 5

Conread position: 6-570
Cow position: chr16:43250-43829 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 41

Conread position: 7-204
Cow position: chr16:6733765-6733574 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 156
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 79, 0

Conread position: 7-214
Cow position: chr16:49463476-49463275 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 79, 0

Conread position: 7-235
Cow position: chr16:56861412-56861634 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 7-242
Cow position: chr16:42734530-42734300 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 94

Conread position: 7-251
Cow position: chr16:36241237-36241476 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-287
Cow position: chr16:18687320-18687049 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 168
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 7-321
Cow position: chr16:5663892-5664202 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 78

Conread position: 7-363
Cow position: chr16:54431676-54432031 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-366
Cow position: chr16:11744643-11745001 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-366
Cow position: chr16:24621595-24621237 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-442
Cow position: chr16:13539322-13538871 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chr16:15311385-15311950 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chr16:20277956-20278509 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 91

Conread position: 7-570
Cow position: chr16:25087712-25088278 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 14

Conread position: 7-570
Cow position: chr16:29035996-29036542 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chr16:46554524-46555091 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 8-190
Cow position: chr16:5094966-5095144 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 146, 93

Conread position: 8-366
Cow position: chr16:33921639-33921286 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 235
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 18

Conread position: 8-366
Cow position: chr16:34505803-34506160 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 78

Conread position: 10-432
Cow position: chr16:48909537-48909122 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 278
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 35

Conread position: 11-342
Cow position: chr16:30696445-30696117 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 216
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 233, 98

Conread position: 11-570
Cow position: chr16:23876423-23875870 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 87

Conread position: 13-561
Cow position: chr16:54180245-54179704 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 85

Conread position: 14-470
Cow position: chr16:44189793-44189308 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 320
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 74, 24

Conread position: 16-562
Cow position: chr16:41684189-41683640 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 82

Conread position: 16-570
Cow position: chr16:13602523-13601973 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 89

Conread position: 16-570
Cow position: chr16:26389055-26388499 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 71

Conread position: 18-519
Cow position: chr16:7009172-7009664 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 79

Conread position: 19-214
Cow position: chr16:29207112-29206924 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 186, 48

Conread position: 21-570
Cow position: chr16:12651044-12651597 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 65

Conread position: 22-570
Cow position: chr16:41515247-41515800 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 16

Conread position: 22-570
Cow position: chr16:49231163-49230612 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 78

Conread position: 24-170
Cow position: chr16:26499624-26499764 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 24-350
Cow position: chr16:19722086-19722398 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 219
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 220, 62

Conread position: 24-570
Cow position: chr16:40656-41203 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 76

Conread position: 25-570
Cow position: chr16:56914113-56913569 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 74

Conread position: 29-362
Cow position: chr16:28066181-28066513 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 57

Conread position: 31-570
Cow position: chr16:41036898-41036356 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 67

Conread position: 32-511
Cow position: chr16:25964042-25964531 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 40

Conread position: 32-555
Cow position: chr16:24988590-24988051 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 54

Conread position: 32-568
Cow position: chr16:4973395-4972859 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 68

Conread position: 39-570
Cow position: chr16:28206974-28206442 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 47

Conread position: 40-512
Cow position: chr16:44049788-44049297 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 60

Conread position: 40-570
Cow position: chr16:43563257-43562727 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 46

Conread position: 46-570
Cow position: chr16:4343762-4343237 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 53

Conread position: 49-570
Cow position: chr16:26665848-26666373 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 37

Conread position: 49-570
Cow position: chr16:37925836-37925316 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 93

Conread position: 53-570
Cow position: chr16:14099998-14100521 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 55

Conread position: 54-245
Cow position: chr16:55867159-55867345 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 13, 48

Conread position: 63-568
Cow position: chr16:43770988-43770490 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 15

Conread position: 92-570
Cow position: chr16:37487076-37486587 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 413

Conread position: 94-512
Cow position: chr16:2480958-2480526 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 64

Conread position: 94-570
Cow position: chr16:1733925-1734408 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 47

Conread position: 94-570
Cow position: chr16:13422736-13422255 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 418

Conread position: 94-570
Cow position: chr16:19081235-19081721 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 433

Conread position: 95-511
Cow position: chr16:41822998-41823423 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 283
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 149, 27

Conread position: 96-570
Cow position: chr16:7154787-7155272 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 94

Conread position: 98-570
Cow position: chr16:42210683-42211165 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 429

Conread position: 103-570
Cow position: chr16:27593630-27593153 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 424

Conread position: 106-570
Cow position: chr16:2233525-2233057 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 106

Conread position: 111-502
Cow position: chr16:28022852-28022447 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 122

Conread position: 123-502
Cow position: chr16:45608627-45609028 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 132-570
Cow position: chr16:23533776-23533331 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 164

Conread position: 132-570
Cow position: chr16:24241180-24240731 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 385

Conread position: 144-469
Cow position: chr16:27105593-27105936 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 225
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 100, 108

Conread position: 154-570
Cow position: chr16:16095455-16095870 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 60

Conread position: 154-570
Cow position: chr16:28468880-28468454 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 372

Conread position: 154-570
Cow position: chr16:49743265-49742861 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 68

Conread position: 155-512
Cow position: chr16:53226073-53225697 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 164

Conread position: 155-570
Cow position: chr16:47367242-47367655 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 106

Conread position: 156-570
Cow position: chr16:10373189-10372767 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 371

Conread position: 158-512
Cow position: chr16:49170721-49170361 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 80

Conread position: 159-570
Cow position: chr16:14569942-14569528 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 31

Conread position: 160-512
Cow position: chr16:26499933-26500282 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 81

Conread position: 164-568
Cow position: chr16:20201327-20201739 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 296
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 26

Conread position: 165-570
Cow position: chr16:6676974-6677390 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 331

Conread position: 169-570
Cow position: chr16:37053296-37053707 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 358

Conread position: 177-513
Cow position: chr16:12244774-12244417 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 13

Conread position: 178-569
Cow position: chr16:5763114-5763506 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 297
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 6, 81

Conread position: 181-507
Cow position: chr16:15349877-15349531 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 284

Conread position: 184-570
Cow position: chr16:37455204-37454815 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 293

Conread position: 187-570
Cow position: chr16:3349290-3349677 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 274

Conread position: 190-570
Cow position: chr16:45559573-45559962 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 217

Conread position: 194-570
Cow position: chr16:48410917-48411304 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 304

Conread position: 196-407
Cow position: chr16:42746143-42745921 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 29

Conread position: 196-570
Cow position: chr16:18651296-18650915 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 17

Conread position: 202-570
Cow position: chr16:40878883-40879261 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 325

Conread position: 204-570
Cow position: chr16:37058716-37058344 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 218

Conread position: 206-570
Cow position: chr16:26627047-26627421 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 321

Conread position: 206-571
Cow position: chr16:5435120-5435495 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 321

Conread position: 209-570
Cow position: chr16:45533766-45534131 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 47

Conread position: 212-570
Cow position: chr16:15256169-15255813 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 186

Conread position: 213-570
Cow position: chr16:7303058-7303425 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 314

Conread position: 218-512
Cow position: chr16:37446391-37446076 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 239

Conread position: 219-570
Cow position: chr16:22799396-22799035 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 308

Conread position: 222-502
Cow position: chr16:599740-600037 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 230
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 54, 17

Conread position: 222-570
Cow position: chr16:1958412-1958058 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 260
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 8, 296

Conread position: 222-570
Cow position: chr16:45465606-45465248 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 305

Conread position: 225-512
Cow position: chr16:24615751-24615442 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 19, 0

Conread position: 231-570
Cow position: chr16:1564065-1563719 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 64

Conread position: 243-512
Cow position: chr16:8482285-8481997 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 52

Conread position: 243-562
Cow position: chr16:55867676-55867989 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 218
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 34, 255

Conread position: 243-564
Cow position: chr16:32326197-32326526 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 207

Conread position: 243-570
Cow position: chr16:36246810-36247139 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 242
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 34, 70

Conread position: 247-570
Cow position: chr16:25042393-25042721 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 235
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 36, 8

Conread position: 248-570
Cow position: chr16:5756276-5756597 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 200

Conread position: 253-528
Cow position: chr16:41805094-41804804 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 218
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 74, 205

Conread position: 254-570
Cow position: chr16:12485956-12485631 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 272

Conread position: 259-570
Cow position: chr16:25074942-25075262 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 239
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 18, 267

Conread position: 260-512
Cow position: chr16:6264627-6264354 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 17, 0

Conread position: 271-508
Cow position: chr16:44147618-44147874 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 86, 180

Conread position: 271-570
Cow position: chr16:13722225-13721920 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 50, 241

Conread position: 275-561
Cow position: chr16:14039795-14040085 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 246

Conread position: 279-499
Cow position: chr16:43801740-43801975 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 45

Conread position: 284-564
Cow position: chr16:701639-701924 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 221
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 14, 8

Conread position: 285-570
Cow position: chr16:55681893-55682173 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 221
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 73, 51

Conread position: 292-512
Cow position: chr16:14569945-14570170 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 77, 0

Conread position: 293-570
Cow position: chr16:6706328-6706046 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 64, 214

Conread position: 293-570
Cow position: chr16:25879703-25879985 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 216
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 64, 229

Conread position: 297-570
Cow position: chr16:4079550-4079289 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 16

Conread position: 300-512
Cow position: chr16:49127295-49127068 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 176
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 56, 30

Conread position: 303-570
Cow position: chr16:49780553-49780281 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 54, 219

Conread position: 309-570
Cow position: chr16:54323015-54322754 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 48, 162

Conread position: 326-570
Cow position: chr16:7385201-7385434 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 18, 180

Conread position: 359-570
Cow position: chr16:25935216-25935415 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 135, 0

Conread position: 362-570
Cow position: chr16:5894918-5895112 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 362-570
Cow position: chr16:20968475-20968283 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 12, 93

Conread position: 365-461
Cow position: chr16:7341274-7341178 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 80
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 365-503
Cow position: chr16:7084179-7084314 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 365-509
Cow position: chr16:18745554-18745410 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 122
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 365-511
Cow position: chr16:23809997-23810143 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 365-525
Cow position: chr16:51401071-51400911 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 143, 109

Conread position: 365-570
Cow position: chr16:2960155-2960348 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chr16:4398733-4398922 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 106, 137

Conread position: 365-570
Cow position: chr16:4721960-4722148 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 75, 0

Conread position: 365-570
Cow position: chr16:5488347-5488540 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 163
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 139, 0

Conread position: 365-570
Cow position: chr16:5665577-5665770 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 128, 0

Conread position: 365-570
Cow position: chr16:18212719-18212526 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chr16:18425879-18426075 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 102

Conread position: 365-570
Cow position: chr16:23711811-23711618 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chr16:24988028-24987835 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chr16:28268239-28268047 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 101, 0

Conread position: 365-570
Cow position: chr16:29050120-29050314 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 114, 62

Conread position: 365-570
Cow position: chr16:46365326-46365133 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 140, 0

Conread position: 366-569
Cow position: chr16:7457505-7457314 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 165
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 128, 0

Conread position: 366-570
Cow position: chr16:34482642-34482831 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 95, 0

Conread position: 366-570
Cow position: chr16:54231865-54231679 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 102

Conread position: 367-570
Cow position: chr16:2304838-2305030 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 161
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 55, 140

Conread position: 367-570
Cow position: chr16:15485269-15485459 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 132, 0

Conread position: 367-570
Cow position: chr16:23249477-23249286 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 73, 80

Conread position: 367-570
Cow position: chr16:50190636-50190445 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 138, 0

Conread position: 369-569
Cow position: chr16:52856355-52856170 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 95, 59

Conread position: 371-570
Cow position: chr16:16681113-16680926 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 119, 0

Conread position: 373-570
Cow position: chr16:24637030-24636845 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 132, 0

Conread position: 375-569
Cow position: chr16:53510038-53509859 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 154
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 54, 0

Conread position: 382-570
Cow position: chr16:15409596-15409416 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 392-564
Cow position: chr16:24702585-24702426 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 166, 38

Conread position: 393-570
Cow position: chr16:9785812-9785984 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 107

Conread position: 407-570
Cow position: chr16:54703015-54703165 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 409-570
Cow position: chr16:16231338-16231497 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 150, 73

Conread position: 413-570
Cow position: chr16:44675877-44676022 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 92, 0

Show alignments to all cow chromosomes.