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Cow genome map

           
Conread name:
           
rspl22_e17.y1
        

               
Conread position:
               
1-132
               

               
Cow position:
               
chr17:51527-51401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 100
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr17:11084754-11084589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr17:14232936-14232747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr17:43453461-43453266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 86
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr17:14006043-14006269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
14, 7
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr17:28025416-28025179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 85
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr17:12674790-12674534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr17:7561312-7561031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
191, 100
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr17:14214373-14214107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr17:26830249-26829983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 86
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr17:8211317-8211590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 86
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr17:5546724-5546427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 86
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr17:2582944-2583260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr17:253484-253815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 99
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr17:240945-241300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 101
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr17:22106981-22106616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 87
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr17:603256-602897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 29
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr17:3401326-3401689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 85
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr17:9073806-9074170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr17:11785542-11785904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 68
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr17:14899379-14899742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr17:18124275-18123915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 98
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr17:24311500-24311857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
238, 26
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr17:1709071-1708619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 40
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr17:1712239-1711787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 40
               

               
Conread position:
               
1-453
               

               
Cow position:
               
chr17:13930554-13931019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-500
               

               
Cow position:
               
chr17:29075668-29075184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 10
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr17:1882917-1883426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr17:16870603-16870109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 31
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr17:19215739-19215217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 79
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr17:15374068-15374584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 82
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr17:138269-138791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr17:5998842-5998330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 100
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr17:10270689-10270170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 84
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr17:24292293-24292817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 99
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr17:21067002-21066486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 30
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chr17:2078312-2078842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 100
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr17:731828-731282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 94
               

               
Conread position:
               
1-561
               

               
Cow position:
               
chr17:147577-148133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-561
               

               
Cow position:
               
chr17:4481227-4480663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 85
               

               
Conread position:
               
1-561
               

               
Cow position:
               
chr17:15808636-15809207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 527
               

               
Conread position:
               
1-561
               

               
Cow position:
               
chr17:29825305-29824742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-562
               

               
Cow position:
               
chr17:17133007-17133556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 31
               

               
Conread position:
               
1-567
               

               
Cow position:
               
chr17:1784890-1784314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 86
               

               
Conread position:
               
1-567
               

               
Cow position:
               
chr17:43991141-43991722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 91
               

               
Conread position:
               
1-568
               

               
Cow position:
               
chr17:25738961-25739523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 62
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr17:183803-184376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr17:1457724-1457151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr17:2176639-2177209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr17:2264850-2265417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr17:6071194-6071770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 31
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr17:6262512-6263084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 86
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr17:8204592-8205180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr17:8222351-8222934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr17:9752454-9753015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
116, 32
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr17:14242489-14243055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 86
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr17:15140682-15140110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr17:15327937-15328510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr17:15438461-15439020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 56
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr17:16855437-16854869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr17:17220997-17221542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 31
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr17:18100419-18099845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr17:20085149-20084581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 68
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr17:21770335-21770909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 86
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr17:22249594-22249023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr17:23321766-23321191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 27
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr17:24784851-24785419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 86
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr17:27977777-27978333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 99
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr17:29949874-29950441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr17:38828576-38829110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 86
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr17:40810407-40810980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 56
               

               
Conread position:
               
1-571
               

               
Cow position:
               
chr17:1312104-1311533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 40
               

               
Conread position:
               
1-571
               

               
Cow position:
               
chr17:4062995-4063568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 87
               

               
Conread position:
               
1-572
               

               
Cow position:
               
chr17:20094505-20093928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 104
               

               
Conread position:
               
2-236
               

               
Cow position:
               
chr17:3305038-3305262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr17:33290299-33289838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 33
               

               
Conread position:
               
2-473
               

               
Cow position:
               
chr17:2150855-2151325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
231, 48
               

               
Conread position:
               
2-570
               

               
Cow position:
               
chr17:2178531-2179072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 131
               

               
Conread position:
               
2-570
               

               
Cow position:
               
chr17:2838689-2839251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 83
               

               
Conread position:
               
2-570
               

               
Cow position:
               
chr17:33791765-33792301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
277, 98
               

               
Conread position:
               
2-570
               

               
Cow position:
               
chr17:33935180-33934592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 100
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chr17:5307072-5306911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr17:17087929-17087671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
241, 24
               

               
Conread position:
               
3-512
               

               
Cow position:
               
chr17:2245398-2244883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 95
               

               
Conread position:
               
3-570
               

               
Cow position:
               
chr17:4084731-4085296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 25
               

               
Conread position:
               
3-570
               

               
Cow position:
               
chr17:4210587-4211158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 60
               

               
Conread position:
               
3-570
               

               
Cow position:
               
chr17:15853387-15853964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 23
               

               
Conread position:
               
4-570
               

               
Cow position:
               
chr17:34567459-34568033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 98
               

               
Conread position:
               
5-520
               

               
Cow position:
               
chr17:15191479-15190961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
10, 81
               

               
Conread position:
               
6-570
               

               
Cow position:
               
chr17:20214764-20215312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 72
               

               
Conread position:
               
7-197
               

               
Cow position:
               
chr17:3709467-3709283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
7-235
               

               
Cow position:
               
chr17:19789896-19790117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
7-366
               

               
Cow position:
               
chr17:15719005-15719363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-427
               

               
Cow position:
               
chr17:36000046-35999615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
7-512
               

               
Cow position:
               
chr17:27792112-27791599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 92
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr17:1969814-1970380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 68
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr17:6122441-6123012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 80
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr17:15709331-15708764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr17:20390436-20391003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr17:20545799-20546366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 80
               

               
Conread position:
               
8-321
               

               
Cow position:
               
chr17:41012196-41012504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
236, 94
               

               
Conread position:
               
8-570
               

               
Cow position:
               
chr17:24027320-24026754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 78
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chr17:18722212-18721858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 59
               

               
Conread position:
               
11-517
               

               
Cow position:
               
chr17:2032869-2033374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 91
               

               
Conread position:
               
12-528
               

               
Cow position:
               
chr17:16118779-16118264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 86
               

               
Conread position:
               
15-562
               

               
Cow position:
               
chr17:14029676-14029126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 84
               

               
Conread position:
               
16-296
               

               
Cow position:
               
chr17:9745626-9745901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
228, 85
               

               
Conread position:
               
16-366
               

               
Cow position:
               
chr17:36816337-36816679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 85
               

               
Conread position:
               
20-366
               

               
Cow position:
               
chr17:13674836-13674486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 81
               

               
Conread position:
               
21-570
               

               
Cow position:
               
chr17:22562829-22563373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 55
               

               
Conread position:
               
22-570
               

               
Cow position:
               
chr17:19406620-19406084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 79
               

               
Conread position:
               
22-570
               

               
Cow position:
               
chr17:30182904-30182352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 64
               

               
Conread position:
               
24-355
               

               
Cow position:
               
chr17:20089974-20089661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 78
               

               
Conread position:
               
25-367
               

               
Cow position:
               
chr17:1655078-1654742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 72
               

               
Conread position:
               
39-568
               

               
Cow position:
               
chr17:17127688-17128232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 47
               

               
Conread position:
               
41-570
               

               
Cow position:
               
chr17:452549-453075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 46
               

               
Conread position:
               
83-431
               

               
Cow position:
               
chr17:22237291-22237656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
97, 93
               

               
Conread position:
               
94-570
               

               
Cow position:
               
chr17:145429-144977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
273, 85
               

               
Conread position:
               
94-570
               

               
Cow position:
               
chr17:15117560-15118046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 433
               

               
Conread position:
               
99-570
               

               
Cow position:
               
chr17:22774693-22774234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 47
               

               
Conread position:
               
100-502
               

               
Cow position:
               
chr17:15307627-15307224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 180
               

               
Conread position:
               
100-570
               

               
Cow position:
               
chr17:1569467-1568991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 375
               

               
Conread position:
               
125-487
               

               
Cow position:
               
chr17:44641696-44641312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
144-512
               

               
Cow position:
               
chr17:15229238-15228857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 14
               

               
Conread position:
               
151-512
               

               
Cow position:
               
chr17:20054937-20055309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 310
               

               
Conread position:
               
153-512
               

               
Cow position:
               
chr17:51268-50917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 59
               

               
Conread position:
               
155-570
               

               
Cow position:
               
chr17:37529168-37528743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 372
               

               
Conread position:
               
160-570
               

               
Cow position:
               
chr17:11084315-11083906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 111
               

               
Conread position:
               
165-570
               

               
Cow position:
               
chr17:26829925-26829515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 21
               

               
Conread position:
               
174-512
               

               
Cow position:
               
chr17:30256-30609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 245
               

               
Conread position:
               
178-570
               

               
Cow position:
               
chr17:6611848-6612251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
8, 350
               

               
Conread position:
               
178-570
               

               
Cow position:
               
chr17:43471761-43471362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
180-570
               

               
Cow position:
               
chr17:34236422-34236022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 347
               

               
Conread position:
               
193-469
               

               
Cow position:
               
chr17:11381158-11381452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
51, 272
               

               
Conread position:
               
220-506
               

               
Cow position:
               
chr17:29079250-29079553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 112
               

               
Conread position:
               
222-506
               

               
Cow position:
               
chr17:38629045-38629333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
23, 159
               

               
Conread position:
               
223-570
               

               
Cow position:
               
chr17:14006299-14006653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
21, 249
               

               
Conread position:
               
226-484
               

               
Cow position:
               
chr17:16463959-16464234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
51, 229
               

               
Conread position:
               
231-569
               

               
Cow position:
               
chr17:5639009-5638660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 258
               

               
Conread position:
               
231-569
               

               
Cow position:
               
chr17:5672637-5672288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 258
               

               
Conread position:
               
243-508
               

               
Cow position:
               
chr17:18200631-18200915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 248
               

               
Conread position:
               
243-512
               

               
Cow position:
               
chr17:14865491-14865201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
243-514
               

               
Cow position:
               
chr17:15350942-15351230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
40, 192
               

               
Conread position:
               
243-570
               

               
Cow position:
               
chr17:5806596-5806260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
34, 283
               

               
Conread position:
               
243-570
               

               
Cow position:
               
chr17:14932974-14932638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 283
               

               
Conread position:
               
243-570
               

               
Cow position:
               
chr17:23338158-23337818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 284
               

               
Conread position:
               
243-570
               

               
Cow position:
               
chr17:36160147-36159805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
37, 145
               

               
Conread position:
               
244-570
               

               
Cow position:
               
chr17:16447584-16447253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 209
               

               
Conread position:
               
254-570
               

               
Cow position:
               
chr17:17957508-17957826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 265
               

               
Conread position:
               
274-570
               

               
Cow position:
               
chr17:3305503-3305805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
78, 228
               

               
Conread position:
               
275-502
               

               
Cow position:
               
chr17:31232608-31232849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
86, 211
               

               
Conread position:
               
275-570
               

               
Cow position:
               
chr17:11032080-11032378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 205
               

               
Conread position:
               
275-570
               

               
Cow position:
               
chr17:18777901-18777601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 230
               

               
Conread position:
               
283-512
               

               
Cow position:
               
chr17:5546348-5546101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
283-570
               

               
Cow position:
               
chr17:8211998-8212285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
74, 178
               

               
Conread position:
               
285-502
               

               
Cow position:
               
chr17:13910672-13910434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
292-570
               

               
Cow position:
               
chr17:37415942-37415659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
48, 210
               

               
Conread position:
               
293-510
               

               
Cow position:
               
chr17:15128333-15128567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
293-570
               

               
Cow position:
               
chr17:20225549-20225831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
64, 229
               

               
Conread position:
               
295-571
               

               
Cow position:
               
chr17:16903534-16903809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
62, 119
               

               
Conread position:
               
298-570
               

               
Cow position:
               
chr17:4635823-4635546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
59, 224
               

               
Conread position:
               
328-570
               

               
Cow position:
               
chr17:36284266-36284496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
362-570
               

               
Cow position:
               
chr17:14250075-14249877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
365-507
               

               
Cow position:
               
chr17:18123635-18123493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
28, 140
               

               
Conread position:
               
365-507
               

               
Cow position:
               
chr17:21666040-21666182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
365-508
               

               
Cow position:
               
chr17:42247814-42247677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
365-569
               

               
Cow position:
               
chr17:6955683-6955867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr17:1672336-1672527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr17:2583428-2583621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr17:28024866-28024673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr17:29471475-29471666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
102, 78
               

               
Conread position:
               
366-570
               

               
Cow position:
               
chr17:20078630-20078448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
368-570
               

               
Cow position:
               
chr17:38991792-38991981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
370-570
               

               
Cow position:
               
chr17:14232663-14232475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
370-570
               

               
Cow position:
               
chr17:14871724-14871912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
376-570
               

               
Cow position:
               
chr17:39824147-39823965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
399-570
               

               
Cow position:
               
chr17:7615617-7615451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               
Show alignments to all cow chromosomes.